|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 674519 |
| Track | FilteredModels2 |
| ProteinId | 674433 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_44 | supercontig | scaffold_44:931..3093 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9522 ID=mRNA_9522|Name=jgi.p|Nanoce1779_2|674433|organism=Nannochloropsis oceanica|type=mRNA|length=1903bp
GCATAGAGAGATGATGCCCAAGTTATGCCTTCTCCCCGAAACAGTGCATA
GCATACCCCTCAAACGCCGAGTCCCATTGATCCTTCAATGCGCACAACCC
ACAACCAGCACTTTGTTGCCTCGGAGCTGTCGCACGCTCCTTCTATTCCT
CCCACCGCATACTTGACAGGCGCAAACTAAAGCTGCTTCTGGGCCTTGCT
TCGTCGTGCTCTGGGTTGTTCTGCTATCGCTTCCCGCGCTACGACGTCCA
AGCGCACAATACCGACGCTCATCTCTTTTCTCGAACCTGTCACCATCACA
GTATACTCAGAAGCCTGTCTATTCTTACTTCTCCGCGGTTATCTTTTCAC
CCAAGTCCCCTATTCAGCCACGGCCAGTAACACGCCCCTCATCATGAACC
GCACTGGCACGGGCAACAACCCGGCTGGCGTTGCGGACAATCCCTTCCCG
AAGCAATGGGCATGGCAAATGGGCACGATTCATCTCAAGGGGCAGGTGGT
GCCGGTCAAGCTTCATTTCCTGCTCCCCATTTTCTGGGTCTTGAGCTTGC
TGTCCGGCCTGGCGTATGGAGGGACTTACATTGGTTTTCGGTTTATCATC
GATGTGCTCATCTTATTCGTGACAGTGTTTGCCCACGAGCTCGGGCATAG
TTACGCCGCCATTCAGTACAGTGGGAAATGCCATTGTATTACTCTGTGGC
CCCTTGGGGGTTTTGCGGAAGTCACGCATGAGCAGGGCCCGAAGGAGGAC
TTGTGGGTGTCGTTTGCTGGCCCGTTGACGCACGTGCCGATGTGCGCTAT
TTGGTATGGAATTGTCGCGGCGGTTGTAAGGGGACCCTTCAATATTATGA
CCATCCCGTGCGATCTTTTCAACTCTCAACCCTGCTTCTGGACCAATGTC
TGCGTCTCCGCCGGCTTTTTGAATATCTGCCTGTTTCTCTTCAACCTGTT
GATCCCCGCCTACCCCCTGGACGCCTCCCGCATTCTCGTCGATTTTTTCG
CTTTGTGCAAAGTAGAAGTAAACAAGGCGGCGCTCATAACGGCAGGGATT
TCTATGCCCATCGGTTTGGGGTTGCTATGCTATGGGTTTTGGGGTTTTTC
CAGGGGGGCAGCTAACTATACAATGACTCTTTTTCTTGCTATTTTTATCC
TGTACTCCACCTGGGGGGTGTTTAAGGCCGCCCGATCGGGCAACGCTGCC
AGGCATCCTATGTTTGTTCATTACTATCGCACCAGCGTGCCAGTCGACGC
CTCAAGCAGCAGTAGCAGCAGCAGTAGCACTACGGGTTTTGGAGCAGCGA
ACGCAACAGCTGGAGGGAGAATCATGTCGCTGTGGGGAGGGGGGAGTGCC
ACGGCTGGCGCGGATGGGGATCCTGCTGGGGTCCTCGTCGTCATCTAATA
TTTTGGGAGGGCCACCCGGTGGGAAGGGTGGTCATCGGTTGGGCTCAAAA
TAACAAGGAGGGGGAAAGGAAGGGTAGAAGGATGTGAGATGCGATGTGAA
AAAATGAGTGTTGCGGAAATTGAGTCTTTCTGTGACCGTGGTATGCAAAC
AGAAGAAGCAATCAAGTGAGGGAAAAGAGAAGCATAAGGAATCAGTAGTC
AAAAAGAGGAAGAAGAGGTCGTGTACATTGATGGCGGGATCTGCCACGGA
CTTGAGAGAGACGCCTTATATTTCATAAAGTTATCCCTTCCATTACTCTC
GTACAATCTCAATATAACAAGAAAAAGAAACAGACGAAAGTATGATAAAA
AAGAGGCCAAAGCATCAGCGGCACACCATCATCCAACACAAAAAGAATGA
ACTAAGAGTGAGGAGGAAACTGATTGACAACGAGAGGACAAATGATTTCA
TCTCTCTTTTGGGATTGTTCAGGAGGAAAATGATAGGCAATGAGAAAGCA
ACT back to topprotein sequence of jgi.p|Nanoce1779_2|674433 >mRNA_9522-protein ID=mRNA_9522-protein|Name=jgi.p|Nanoce1779_2|674433|organism=Nannochloropsis oceanica|type=polypeptide|length=335bp
MNRTGTGNNPAGVADNPFPKQWAWQMGTIHLKGQVVPVKLHFLLPIFWVL
SLLSGLAYGGTYIGFRFIIDVLILFVTVFAHELGHSYAAIQYSGKCHCIT
LWPLGGFAEVTHEQGPKEDLWVSFAGPLTHVPMCAIWYGIVAAVVRGPFN
IMTIPCDLFNSQPCFWTNVCVSAGFLNICLFLFNLLIPAYPLDASRILVD
FFALCKVEVNKAALITAGISMPIGLGLLCYGFWGFSRGAANYTMTLFLAI
FILYSTWGVFKAARSGNAARHPMFVHYYRTSVPVDASSSSSSSSSTTGFG
AANATAGGRIMSLWGGGSATAGADGDPAGVLVVI* back to topmRNA from alignment at scaffold_44:931..3093- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9522 ID=mRNA_9522|Name=jgi.p|Nanoce1779_2|674433|organism=Nannochloropsis oceanica|type=mRNA|length=2163bp|location=Sequence derived from alignment at scaffold_44:931..3093- (Nannochloropsis oceanica)
GCATAGAGAGATGATGCCCAAGTTATGCCTTCTCCCCGAAACAGTGCATA
GCATACCCCTCAAACGCCGAGTCCCATTGATCCTTCAATGCGCACAACCC
ACAACCAGCACTTTGTTGCCTCGGAGCTGTCGCACGCTCCTTCTATTCCT
CCCACCGCATACTTGACAGGCGCAAACTAAAGCTGCTTCTGGGCCTTGCT
TCGTCGTGCTCTGGGTTGTTCTGCTATCGCTTCCCGCGCTACGACGTCCA
AGCGCACAATACCGACGCTCATCTCTTTTCTCGAACCTGTCACCATCACA
GTATACTCAGAAGCCTGTCTATTCTTACTTCTCCGCGGTTATCTTTTCAC
CCAAGTCCCCTATTCAGCCACGGCCAGTAACACGCCCCTCATCATGAACC
GCACTGGCACGGGCAACAACCCGGCTGGCGTTGCGGACAATCCCTTCCCG
AAGCAATGGGCATGGCAAATGGGCACGATTCATCTCAAGGGGCAGGTGGT
GCCGGTCAAGCTTCATTTCCTGCTCCCCATTTTCTGGGTCTTGAGCTTGC
TGTCCGGCCTGGCGTATGGAGGGACTTACATTGGTTTTCGGTTTATCATC
GATGTGCTCATCTTATTCGTGACAGTGTTTGCCCACGAGCTCGGGCATAG
TTACGCCGCCATTCAGTACAGTGGGAAATGCCATTGTATTACTCTGTGGC
CCCTTGGGGGTTTTGCGGAAGTCACGCATGAGCAGGGCCCGAAGGAGGAC
TTGTGGGTGTCGTTTGCTGGCCCGTTGACGCACGTGCCGATGTGCGCTAT
TTGGTATGGAATTGTCGCGGCGGTTGTAAGGGGACCCTTCAATATTATGA
GTACGTACGAGGGTTGTGTGTGTCATTATTGAGGGTTTGTTCCATCCAAC
GCAATCCTCAACCTCCTCTCTCTTCTCTCCCCCATCCCCTTTAGCCATCC
CGTGCGATCTTTTCAACTCTCAACCCTGCTTCTGGACCAATGTCTGCGTC
TCCGCCGGCTTTTTGAATATCTGCCTGTTTCTCTTCAACCTGTTGATCCC
CGCCTACCCCCTGGACGCCTCCCGCATTCTCGTCGATTTTTTCGCTTTGT
GCAAAGTAGAAGTAAACAAGGCGGCGCTCATAACGGCAGGGATTTCTATG
CCCATCGGTTTGGGGTTGCTATGCTATGGGTTTTGGGGTTTTTCCAGGGG
GGCAGCTAACTATACAATGACTCTTTTTCTTGCTATTTTTATCCTGTACT
CCACCTGGGGGGTGTTTAAGGCCGCCCGATCGGGCAACGCTGCCAGGCAT
CCTATGTTTGTTCATTACTATCGCACCAGCGTGCCAGTCGACGCCTCAAG
CAGCAGTAGCAGCAGCAGTAGCACTACGGGTTTTGGAGCAGCGAACGCAA
CAGCTGGAGGGAGAATCATGTCGCTGTGGGGAGGGGGGAGTGCCACGGCT
GGCGCGGATGGGGATCCTGCTGGTACGGGCGGACCTGTTGCTACAAGTGG
TGGGGTCACTGCCTTCTCAAAAATGGAAGCAGGCAAGGGGCATCGGTTGG
GAGGGAAGGCGGCACCAACAGGAGTGCCTGCAGCAGCACCAGTGGGAGGG
GGAGGAGCACGAGTCAATCGGCCTTGTTGTCCTCGCAGGGGTCCTCGTCG
TCATCTAATATTTTGGGAGGGCCACCCGGTGGGAAGGGTGGTCATCGGTT
GGGCTCAAAATAACAAGGAGGGGGAAAGGAAGGGTAGAAGGATGTGAGAT
GCGATGTGAAAAAATGAGTGTTGCGGAAATTGAGTCTTTCTGTGACCGTG
GTATGCAAACAGAAGAAGCAATCAAGTGAGGGAAAAGAGAAGCATAAGGA
ATCAGTAGTCAAAAAGAGGAAGAAGAGGTCGTGTACATTGATGGCGGGAT
CTGCCACGGACTTGAGAGAGACGCCTTATATTTCATAAAGTTATCCCTTC
CATTACTCTCGTACAATCTCAATATAACAAGAAAAAGAAACAGACGAAAG
TATGATAAAAAAGAGGCCAAAGCATCAGCGGCACACCATCATCCAACACA
AAAAGAATGAACTAAGAGTGAGGAGGAAACTGATTGACAACGAGAGGACA
AATGATTTCATCTCTCTTTTGGGATTGTTCAGGAGGAAAATGATAGGCAA
TGAGAAAGCAACT back to topCoding sequence (CDS) from alignment at scaffold_44:931..3093- >mRNA_9522 ID=mRNA_9522|Name=jgi.p|Nanoce1779_2|674433|organism=Nannochloropsis oceanica|type=CDS|length=3015bp|location=Sequence derived from alignment at scaffold_44:931..3093- (Nannochloropsis oceanica)
GGGTCCTCGTCGTCATCTAACCATCCCGTGCGATCTTTTCAACTCTCAAC
CCTGCTTCTGGACCAATGTCTGCGTCTCCGCCGGCTTTTTGAATATCTGC
CTGTTTCTCTTCAACCTGTTGATCCCCGCCTACCCCCTGGACGCCTCCCG
CATTCTCGTCGATTTTTTCGCTTTGTGCAAAGTAGAAGTAAACAAGGCGG
CGCTCATAACGGCAGGGATTTCTATGCCCATCGGTTTGGGGTTGCTATGC
TATGGGTTTTGGGGTTTTTCCAGGGGGGCAGCTAACTATACAATGACTCT
TTTTCTTGCTATTTTTATCCTGTACTCCACCTGGGGGGTGTTTAAGGCCG
CCCGATCGGGCAACGCTGCCAGGCATCCTATGTTTGTTCATTACTATCGC
ACCAGCGTGCCAGTCGACGCCTCAAGCAGCAGTAGCAGCAGCAGTAGCAC
TACGGGTTTTGGAGCAGCGAACGCAACAGCTGGAGGGAGAATCATGTCGC
TGTGGGGAGGGGGGAGTGCCACGGCTGGCGCGGATGGGGATCCTGCTGAT
GAACCGCACTGGCACGGGCAACAACCCGGCTGGCGTTGCGGACAATCCCT
TCCCGAAGCAATGGGCATGGCAAATGGGCACGATTCATCTCAAGGGGCAG
GTGGTGCCGGTCAAGCTTCATTTCCTGCTCCCCATTTTCTGGGTCTTGAG
CTTGCTGTCCGGCCTGGCGTATGGAGGGACTTACATTGGTTTTCGGTTTA
TCATCGATGTGCTCATCTTATTCGTGACAGTGTTTGCCCACGAGCTCGGG
CATAGTTACGCCGCCATTCAGTACAGTGGGAAATGCCATTGTATTACTCT
GTGGCCCCTTGGGGGTTTTGCGGAAGTCACGCATGAGCAGGGCCCGAAGG
AGGACTTGTGGGTGTCGTTTGCTGGCCCGTTGACGCACGTGCCGATGTGC
GCTATTTGGTATGGAATTGTCGCGGCGGTTGTAAGGGGACCCTTCAATAT
TATGAGGGTCCTCGTCGTCATCTAACCATCCCGTGCGATCTTTTCAACTC
TCAACCCTGCTTCTGGACCAATGTCTGCGTCTCCGCCGGCTTTTTGAATA
TCTGCCTGTTTCTCTTCAACCTGTTGATCCCCGCCTACCCCCTGGACGCC
TCCCGCATTCTCGTCGATTTTTTCGCTTTGTGCAAAGTAGAAGTAAACAA
GGCGGCGCTCATAACGGCAGGGATTTCTATGCCCATCGGTTTGGGGTTGC
TATGCTATGGGTTTTGGGGTTTTTCCAGGGGGGCAGCTAACTATACAATG
ACTCTTTTTCTTGCTATTTTTATCCTGTACTCCACCTGGGGGGTGTTTAA
GGCCGCCCGATCGGGCAACGCTGCCAGGCATCCTATGTTTGTTCATTACT
ATCGCACCAGCGTGCCAGTCGACGCCTCAAGCAGCAGTAGCAGCAGCAGT
AGCACTACGGGTTTTGGAGCAGCGAACGCAACAGCTGGAGGGAGAATCAT
GTCGCTGTGGGGAGGGGGGAGTGCCACGGCTGGCGCGGATGGGGATCCTG
CTGATGAACCGCACTGGCACGGGCAACAACCCGGCTGGCGTTGCGGACAA
TCCCTTCCCGAAGCAATGGGCATGGCAAATGGGCACGATTCATCTCAAGG
GGCAGGTGGTGCCGGTCAAGCTTCATTTCCTGCTCCCCATTTTCTGGGTC
TTGAGCTTGCTGTCCGGCCTGGCGTATGGAGGGACTTACATTGGTTTTCG
GTTTATCATCGATGTGCTCATCTTATTCGTGACAGTGTTTGCCCACGAGC
TCGGGCATAGTTACGCCGCCATTCAGTACAGTGGGAAATGCCATTGTATT
ACTCTGTGGCCCCTTGGGGGTTTTGCGGAAGTCACGCATGAGCAGGGCCC
GAAGGAGGACTTGTGGGTGTCGTTTGCTGGCCCGTTGACGCACGTGCCGA
TGTGCGCTATTTGGTATGGAATTGTCGCGGCGGTTGTAAGGGGACCCTTC
AATATTATGAGGGTCCTCGTCGTCATCTAACCATCCCGTGCGATCTTTTC
AACTCTCAACCCTGCTTCTGGACCAATGTCTGCGTCTCCGCCGGCTTTTT
GAATATCTGCCTGTTTCTCTTCAACCTGTTGATCCCCGCCTACCCCCTGG
ACGCCTCCCGCATTCTCGTCGATTTTTTCGCTTTGTGCAAAGTAGAAGTA
AACAAGGCGGCGCTCATAACGGCAGGGATTTCTATGCCCATCGGTTTGGG
GTTGCTATGCTATGGGTTTTGGGGTTTTTCCAGGGGGGCAGCTAACTATA
CAATGACTCTTTTTCTTGCTATTTTTATCCTGTACTCCACCTGGGGGGTG
TTTAAGGCCGCCCGATCGGGCAACGCTGCCAGGCATCCTATGTTTGTTCA
TTACTATCGCACCAGCGTGCCAGTCGACGCCTCAAGCAGCAGTAGCAGCA
GCAGTAGCACTACGGGTTTTGGAGCAGCGAACGCAACAGCTGGAGGGAGA
ATCATGTCGCTGTGGGGAGGGGGGAGTGCCACGGCTGGCGCGGATGGGGA
TCCTGCTGATGAACCGCACTGGCACGGGCAACAACCCGGCTGGCGTTGCG
GACAATCCCTTCCCGAAGCAATGGGCATGGCAAATGGGCACGATTCATCT
CAAGGGGCAGGTGGTGCCGGTCAAGCTTCATTTCCTGCTCCCCATTTTCT
GGGTCTTGAGCTTGCTGTCCGGCCTGGCGTATGGAGGGACTTACATTGGT
TTTCGGTTTATCATCGATGTGCTCATCTTATTCGTGACAGTGTTTGCCCA
CGAGCTCGGGCATAGTTACGCCGCCATTCAGTACAGTGGGAAATGCCATT
GTATTACTCTGTGGCCCCTTGGGGGTTTTGCGGAAGTCACGCATGAGCAG
GGCCCGAAGGAGGACTTGTGGGTGTCGTTTGCTGGCCCGTTGACGCACGT
GCCGATGTGCGCTATTTGGTATGGAATTGTCGCGGCGGTTGTAAGGGGAC
CCTTCAATATTATGA back to top
|