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Properties
| Property Name | Value |
|---|
| TranscriptId | 606355 |
| Track | FilteredModels2 |
| ProteinId | 606269 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_34 | supercontig | scaffold_34:227858..229427 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9518 ID=mRNA_9518|Name=jgi.p|Nanoce1779_2|606269|organism=Nannochloropsis oceanica|type=mRNA|length=1570bp
ACAGCAAACACACGTGACACATCATGCGTAGCGCTTTTTCTCTCCTTGCC
CTCGGCACCACGTTTGTCCTGACTGCGGCTCAGCCGATGGTGACCCTCAC
CTCCATCAAGGCTGTCGACGTGGCCAGGGAGAACAAGGACCAATGGAGTC
TCAAGGGCTACGTCGACGACCCTACCGGGACGTATGTTCCCTTGGTGGAT
GACATTGGCTTGAACGTGAGGCTTGTGGACTCGAACAACGTCAACATTAG
TGCCGTGAACTTTGCCCCTAGTGAGTGCAACCCGCTCCTCAACGATAAGG
GAACCGTTTGCAAGGTTACGGGTGCCCGTTACACGCTGAGGAAGATCAAT
AAGCTCCCCAAGAGCGCCATGATCTCGGCGCAGAAGAAGCACAACAAGAC
CAGCAGCGAATCTTTCTATTACAAGCTTTCGGGCGTTTTCCGCCGTCAGG
AGTTCACGGCCACTGTGGTGACGCCTCTGACTGTTATCTTCGCTGCGGGC
AACGTTGGCACCCTTGCTGTCACCAACACGGACTGTACAGAGAAAGATGG
AGCCAAATCCACCAGGTACCTCTGCAAGCCCGGTGCCTCTACCCCCCGCC
CCTACCGGGCTCCCATAAACGGCCTTATAACGGATCATAAGCATGACAAG
TTTCATGTCTCGCTCCCCGTTTCTAATGTGTTTTTGATGATAAGGTTCTG
TATGCCCCTTGTCAGTCTGGAAGCTCCACCTTCCATACGTGATGTGTCGA
CTTGTCTAGGCGTGTGACAATGCCTTTGTTCGTGTTTGTGGTTGTGTTGT
GTATGTGTTTTTATTTGTTGCTCGTGTGCCACTTATGTTGAGAGCTTCAA
TTGCCTCATACGTCCACCAGAGGCTTCTTTGAAGCCTGCATGCGGGAGGA
GGAAAACATGGCTCAATTTTCCGTGTAGACAGGTAACTAAAGTCCAAAAT
GTAGCCGGTGAATCAAGATAGTGCAGACGCTTCTATCATTCTTTCTTCCA
TGCTTCTTCTTCTTTGACTTCGTCTTCGTCTGCGTCTTTTTTCCTTTCTT
GCCCCCGCTCCCGGTCCTCCCCCTCTCCCCCCCCTCCTCCAGGTATCCTT
TTGGGGGAATCGCGTGAAGGAGAGCAACACGAAGACCCTGTTACCCACCT
TCTTCTCTTTCTTTTCATGATCTATTTCTTCTTCTCCTTCATCACGTGAA
ACTCAACCATCTTGCATTGACCATCCGCCAGCAAAATGATGATGTAACTC
GGCCGTGTGAGAGGCAGAAGAGAAGTAGAATGTAGCCTCGCACTGATTGT
TGTCGTTGTTTGGCAGAGCAGGAATGGATGGAGGGCGGGAAGGAGAGAAG
GGTGGATAGTTAATCGTATATTAAAAAGGAGGGAAATATACAGATAGCGG
ATAGCACTTTGAAAGGAGGAAAAAGAAGGCGCCGAGAAAGCAGAAGTGTA
ATCGTGAAAGAGCACACAGAGTCGACAGCATAATCAACAGGAAAAAGACA
GACGGGAAAGACAAGGGCGTGCTGCCGATGAAGAGAAATGAAAATCAAAT
TTGAAATAAGAGGAATCAAA back to topprotein sequence of jgi.p|Nanoce1779_2|606269 >mRNA_9518-protein ID=mRNA_9518-protein|Name=jgi.p|Nanoce1779_2|606269|organism=Nannochloropsis oceanica|type=polypeptide|length=198bp
MRSAFSLLALGTTFVLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDP
TGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTG
ARYTLRKINKLPKSAMISAQKKHNKTSSESFYYKLSGVFRRQEFTATVVT
PLTVIFAAGNVGTLAVTNTDCTEKDGAKSTRYLCKPGASTPRPYRAPI back to topmRNA from alignment at scaffold_34:227858..229427- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9518 ID=mRNA_9518|Name=jgi.p|Nanoce1779_2|606269|organism=Nannochloropsis oceanica|type=mRNA|length=1570bp|location=Sequence derived from alignment at scaffold_34:227858..229427- (Nannochloropsis oceanica)
ACAGCAAACACACGTGACACATCATGCGTAGCGCTTTTTCTCTCCTTGCC
CTCGGCACCACGTTTGTCCTGACTGCGGCTCAGCCGATGGTGACCCTCAC
CTCCATCAAGGCTGTCGACGTGGCCAGGGAGAACAAGGACCAATGGAGTC
TCAAGGGCTACGTCGACGACCCTACCGGGACGTATGTTCCCTTGGTGGAT
GACATTGGCTTGAACGTGAGGCTTGTGGACTCGAACAACGTCAACATTAG
TGCCGTGAACTTTGCCCCTAGTGAGTGCAACCCGCTCCTCAACGATAAGG
GAACCGTTTGCAAGGTTACGGGTGCCCGTTACACGCTGAGGAAGATCAAT
AAGCTCCCCAAGAGCGCCATGATCTCGGCGCAGAAGAAGCACAACAAGAC
CAGCAGCGAATCTTTCTATTACAAGCTTTCGGGCGTTTTCCGCCGTCAGG
AGTTCACGGCCACTGTGGTGACGCCTCTGACTGTTATCTTCGCTGCGGGC
AACGTTGGCACCCTTGCTGTCACCAACACGGACTGTACAGAGAAAGATGG
AGCCAAATCCACCAGGTACCTCTGCAAGCCCGGTGCCTCTACCCCCCGCC
CCTACCGGGCTCCCATAAACGGCCTTATAACGGATCATAAGCATGACAAG
TTTCATGTCTCGCTCCCCGTTTCTAATGTGTTTTTGATGATAAGGTTCTG
TATGCCCCTTGTCAGTCTGGAAGCTCCACCTTCCATACGTGATGTGTCGA
CTTGTCTAGGCGTGTGACAATGCCTTTGTTCGTGTTTGTGGTTGTGTTGT
GTATGTGTTTTTATTTGTTGCTCGTGTGCCACTTATGTTGAGAGCTTCAA
TTGCCTCATACGTCCACCAGAGGCTTCTTTGAAGCCTGCATGCGGGAGGA
GGAAAACATGGCTCAATTTTCCGTGTAGACAGGTAACTAAAGTCCAAAAT
GTAGCCGGTGAATCAAGATAGTGCAGACGCTTCTATCATTCTTTCTTCCA
TGCTTCTTCTTCTTTGACTTCGTCTTCGTCTGCGTCTTTTTTCCTTTCTT
GCCCCCGCTCCCGGTCCTCCCCCTCTCCCCCCCCTCCTCCAGGTATCCTT
TTGGGGGAATCGCGTGAAGGAGAGCAACACGAAGACCCTGTTACCCACCT
TCTTCTCTTTCTTTTCATGATCTATTTCTTCTTCTCCTTCATCACGTGAA
ACTCAACCATCTTGCATTGACCATCCGCCAGCAAAATGATGATGTAACTC
GGCCGTGTGAGAGGCAGAAGAGAAGTAGAATGTAGCCTCGCACTGATTGT
TGTCGTTGTTTGGCAGAGCAGGAATGGATGGAGGGCGGGAAGGAGAGAAG
GGTGGATAGTTAATCGTATATTAAAAAGGAGGGAAATATACAGATAGCGG
ATAGCACTTTGAAAGGAGGAAAAAGAAGGCGCCGAGAAAGCAGAAGTGTA
ATCGTGAAAGAGCACACAGAGTCGACAGCATAATCAACAGGAAAAAGACA
GACGGGAAAGACAAGGGCGTGCTGCCGATGAAGAGAAATGAAAATCAAAT
TTGAAATAAGAGGAATCAAA back to topCoding sequence (CDS) from alignment at scaffold_34:227858..229427- >mRNA_9518 ID=mRNA_9518|Name=jgi.p|Nanoce1779_2|606269|organism=Nannochloropsis oceanica|type=CDS|length=595bp|location=Sequence derived from alignment at scaffold_34:227858..229427- (Nannochloropsis oceanica)
ATGCGTAGCGCTTTTTCTCTCCTTGCCCTCGGCACCACGTTTGTCCTGAC
TGCGGCTCAGCCGATGGTGACCCTCACCTCCATCAAGGCTGTCGACGTGG
CCAGGGAGAACAAGGACCAATGGAGTCTCAAGGGCTACGTCGACGACCCT
ACCGGGACGTATGTTCCCTTGGTGGATGACATTGGCTTGAACGTGAGGCT
TGTGGACTCGAACAACGTCAACATTAGTGCCGTGAACTTTGCCCCTAGTG
AGTGCAACCCGCTCCTCAACGATAAGGGAACCGTTTGCAAGGTTACGGGT
GCCCGTTACACGCTGAGGAAGATCAATAAGCTCCCCAAGAGCGCCATGAT
CTCGGCGCAGAAGAAGCACAACAAGACCAGCAGCGAATCTTTCTATTACA
AGCTTTCGGGCGTTTTCCGCCGTCAGGAGTTCACGGCCACTGTGGTGACG
CCTCTGACTGTTATCTTCGCTGCGGGCAACGTTGGCACCCTTGCTGTCAC
CAACACGGACTGTACAGAGAAAGATGGAGCCAAATCCACCAGGTACCTCT
GCAAGCCCGGTGCCTCTACCCCCCGCCCCTACCGGGCTCCCATAA back to top
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