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Properties
| Property Name | Value |
|---|
| TranscriptId | 606331 |
| Track | FilteredModels2 |
| ProteinId | 606245 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_34 | supercontig | scaffold_34:205887..207747 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9512 ID=mRNA_9512|Name=jgi.p|Nanoce1779_2|606245|organism=Nannochloropsis oceanica|type=mRNA|length=1413bp
AGGCCTTCCCCAACTACACCATCATCACATGACAGGCGGTAGCAACGACA
GCAGCAGCAACATGACAGACAACGATGCTGTGGCCAATGTCACAGATGGA
GACGGTTCTACCCGCGAGAACTTTCAAATCATTGACATCGATCCTCCTTC
CTCCCCCATGAGCTCCGCTGCCTCTACCAGCTTTCGAGAAGCTGAGGGAG
GAGTAGGACTGTGTTGTTTGCGGCGAGACCCAACCGCTTTATCTCTCTTG
CCGTTTAGCATGTTATTTGCGGCACGAACGTCGGGCGATGCAATCGGTAA
TTCCAATCGGCATAGGAATAAGTGGGGGCAAATTCGAATTAAAACCTGGA
AGGAGACTAAGTGGCAGGCGAAGCTCGAGTTTGCCTTGCTGAAGCAGAAA
TGGAAGTGGATAGTGGGCTTCTTTTTCGCCGAGTACTTCAATCTCGTGAT
GCATAACTTCATCTACTATCTGGAAGGGGTGATCTGGGGGCAGGACGGGC
CCCCTCCTCCTTTAGAAGACCTGGGTATCAGGCTATTCGCAGGCGTTTTC
CCTCCCTCGGCCGAGTGGATCGTGGACCTCTTCCTCTACATTCTTATCGG
CATGGTCCTCACCCTCTGCATTGCGCGTTTTGTTTTAAATAATGTTCCGT
GGGGCGGACCTGAGATGTTGCTCACTAAGAAGAGGGGAGATGGCCTGGAC
GTTGCCACCTGCTCGATTCCCGTACCCTCCGTCAATATATGCAAACGTAT
CTGCAAGATCCTTTCCATTGCAATCGTCTGTCGCATACTGTCCTATACGC
TCACATTAGAGCCAAATCCGGCCGCGTACTGTCACCCACCTTTTTGGAAC
CCTCCTAGCACCGTCAGTGAGATCATGAGCACGGTGGCCGTGAGGGGCAG
CTGTGGGGATCTCCTCTTCTCGAGCCACACATTCCATGGCATGGTGATGA
TGCTGACAATCTTGCGGCACGCGCCGAGGATGTACGTCATCTGCGGAATG
GCTGTCTGCTCGATGGTCATGGTCGTCATCTCCCTCCTGGCATATAAGAG
CCACTATTCACACGATATCGTACAAGCCGTCTACACCACCGTGTTGCTCT
GGTTGCTGACACCCGAGCCCACTGTCGCAGATTGCGAAGAGTTGCAAATC
GACTTTCCACCATGGGAGCTCTAAGGAGGTAGAAGGCATATTATATTGCA
TCAAGAAAAGATAAAGGATCTGGGGCAGCAGTGATTGCCATGCACATTTC
TTGTACATGGAAGGAAATAGCGTATGTTTGTGAAAAGTCAAATGATGACA
AACTATTATTCTTTCGGGGATTTAAAATGAAAATGATCGTCCCTACCATA
AATGTCACTTTTGCTTGAAAGCAGATAAAGAGAAATTGGAAAGAACAAAA
CCGAAATGTTACC back to topprotein sequence of jgi.p|Nanoce1779_2|606245 >mRNA_9512-protein ID=mRNA_9512-protein|Name=jgi.p|Nanoce1779_2|606245|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp
MTGGSNDSSSNMTDNDAVANVTDGDGSTRENFQIIDIDPPSSPMSSAAST
SFREAEGGVGLCCLRRDPTALSLLPFSMLFAARTSGDAIGNSNRHRNKWG
QIRIKTWKETKWQAKLEFALLKQKWKWIVGFFFAEYFNLVMHNFIYYLEG
VIWGQDGPPPPLEDLGIRLFAGVFPPSAEWIVDLFLYILIGMVLTLCIAR
FVLNNVPWGGPEMLLTKKRGDGLDVATCSIPVPSVNICKRICKILSIAIV
CRILSYTLTLEPNPAAYCHPPFWNPPSTVSEIMSTVAVRGSCGDLLFSSH
TFHGMVMMLTILRHAPRMYVICGMAVCSMVMVVISLLAYKSHYSHDIVQA
VYTTVLLWLLTPEPTVADCEELQIDFPPWEL* back to topmRNA from alignment at scaffold_34:205887..207747- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9512 ID=mRNA_9512|Name=jgi.p|Nanoce1779_2|606245|organism=Nannochloropsis oceanica|type=mRNA|length=1861bp|location=Sequence derived from alignment at scaffold_34:205887..207747- (Nannochloropsis oceanica)
AGGCCTTCCCCAACTACACCATCATCACATGACAGGCGGTAGCAACGACA
GCAGCAGCAACATGACAGACAACGATGCTGTGGCCAATGTCACAGATGGA
GACGGTTCTACCCGCGAGAACTTTCAAATCATTGACATCGATCCTCCTTC
CTCCCCCATGAGCTCCGCTGCCTCTACCAGCTTTCGAGAAGCTGAGGGAG
GAGTAGGACTGTGTTGTTTGCGGCGAGACCCAACCGCTTTATCTCTCTTG
CCGTTTAGCATGTTATTTGCGGCACGAACGTCGGGCGATGCAATCGGTAA
TTCCAATCGGCATAGGAATAAGTGGGGGCAAATTCGAATTAAAACCTGGA
AGGAGGTAAGTGAGAGGGAGGGAGAAATGGGGAAGCGAGCGGGCAGAATG
AATAAGAGGGACCTTCAAAATTTTATCTGAGGGAGCAGGGTGATGGGGAT
CGTGAAGAGCTCGAAATCCTTTACATATTTCATCCTCATCTTAACGCGAT
TCCCAACAGACTAAGTGGCAGGCGAAGCTCGAGTTTGCCTTGCTGAAGCA
GAAATGGAAGTGGATAGTGGTACGTCTACAAACTACTGCCTCAATCTCTT
CCCTGCATTGTCATGCCATCTCCGTCGGTCGCAATATTCCGAGCAGCTCA
CATACAGGTGCTTATCTCTTAATTCCTTTTCTCCGACTTTGTGTACCACC
TCTCTCCCTCCCTCTACCCTCCCCCTGCAGGGCTTCTTTTTCGCCGAGTA
CTTCAATCTCGTGATGCATAACTTCATCTACTATCTGGAAGGGGTGATCT
GGGGGCAGGACGGGCCCCCTCCTCCTTTAGAAGACCTGGGTATCAGGCTA
TTCGCAGGCGTTTTCCCTCCCTCGGCCGAGTGGATCGTGGACCTCTTCCT
CTACATTCTTATCGGCATGGTCCTCACCCTCTGCATTGCGCGTTTTGTTT
TAAATAATGTTCCGTGGGGCGGACCTGAGATGTTGCTCACTAAGAAGAGG
GGAGATGGCCTGGACGTTGCCACCTGCTCGATTCCCGTACCCTCCGTCAA
TATATGCAAACGTATCTGCAAGATCCTTTCCATTGCAATCGTCTGTCGCA
TACTGTCCTATACGCTCACATTAGAGCCAAATCCGGCCGCGTACTGTCAC
CCACCTTTTTGGAACCCTCCTAGCACCGTCAGTGAGATCATGAGCACGGT
GGCCGTGAGGGGCAGCTGTGGGGATCTCCTCTTCTCGAGCCACACATTCC
ATGGCATGGTGATGATGCTGACAATCTTGCGGCACGCGCCGAGGATGTAC
GTCATCTGCGGAATGGCTGTCTGCTCGATGGTCATGGTCGTCATCTCCCT
CCTGGCATATAAGAGCCACTATTCACACGATATCGTACAAGGTAAGCCCT
TGCCCACCCTCCCTCCATCCTTTCCGCTTGTATAAGGGACGAGGTGTATG
TGTTTCAGCCATATTCATGACCATGTCCCTGATTTCCTTCCTTCCTCTAT
TCTCTGACCCTCTCCCCATCTCAGCCGTCTACACCACCGTGTTGCTCTGG
TTGCTGACACCCGAGCCCACTGTCGCAGATTGCGAAGAGTTGCAAATCGA
CTTTCCACCATGGGAGCTCTAAGGAGGTAGAAGGCATATTATATTGCATC
AAGAAAAGATAAAGGATCTGGGGCAGCAGTGATTGCCATGCACATTTCTT
GTACATGGAAGGAAATAGCGTATGTTTGTGAAAAGTCAAATGATGACAAA
CTATTATTCTTTCGGGGATTTAAAATGAAAATGATCGTCCCTACCATAAA
TGTCACTTTTGCTTGAAAGCAGATAAAGAGAAATTGGAAAGAACAAAACC
GAAATGTTACC back to topCoding sequence (CDS) from alignment at scaffold_34:205887..207747- >mRNA_9512 ID=mRNA_9512|Name=jgi.p|Nanoce1779_2|606245|organism=Nannochloropsis oceanica|type=CDS|length=4584bp|location=Sequence derived from alignment at scaffold_34:205887..207747- (Nannochloropsis oceanica)
CCGTCTACACCACCGTGTTGCTCTGGTTGCTGACACCCGAGCCCACTGTC
GCAGATTGCGAAGAGTTGCAAATCGACTTTCCACCATGGGAGCTCTAAGG
CTTCTTTTTCGCCGAGTACTTCAATCTCGTGATGCATAACTTCATCTACT
ATCTGGAAGGGGTGATCTGGGGGCAGGACGGGCCCCCTCCTCCTTTAGAA
GACCTGGGTATCAGGCTATTCGCAGGCGTTTTCCCTCCCTCGGCCGAGTG
GATCGTGGACCTCTTCCTCTACATTCTTATCGGCATGGTCCTCACCCTCT
GCATTGCGCGTTTTGTTTTAAATAATGTTCCGTGGGGCGGACCTGAGATG
TTGCTCACTAAGAAGAGGGGAGATGGCCTGGACGTTGCCACCTGCTCGAT
TCCCGTACCCTCCGTCAATATATGCAAACGTATCTGCAAGATCCTTTCCA
TTGCAATCGTCTGTCGCATACTGTCCTATACGCTCACATTAGAGCCAAAT
CCGGCCGCGTACTGTCACCCACCTTTTTGGAACCCTCCTAGCACCGTCAG
TGAGATCATGAGCACGGTGGCCGTGAGGGGCAGCTGTGGGGATCTCCTCT
TCTCGAGCCACACATTCCATGGCATGGTGATGATGCTGACAATCTTGCGG
CACGCGCCGAGGATGTACGTCATCTGCGGAATGGCTGTCTGCTCGATGGT
CATGGTCGTCATCTCCCTCCTGGCATATAAGAGCCACTATTCACACGATA
TCGTACAAGACTAAGTGGCAGGCGAAGCTCGAGTTTGCCTTGCTGAAGCA
GAAATGGAAGTGGATAGTGATGACAGGCGGTAGCAACGACAGCAGCAGCA
ACATGACAGACAACGATGCTGTGGCCAATGTCACAGATGGAGACGGTTCT
ACCCGCGAGAACTTTCAAATCATTGACATCGATCCTCCTTCCTCCCCCAT
GAGCTCCGCTGCCTCTACCAGCTTTCGAGAAGCTGAGGGAGGAGTAGGAC
TGTGTTGTTTGCGGCGAGACCCAACCGCTTTATCTCTCTTGCCGTTTAGC
ATGTTATTTGCGGCACGAACGTCGGGCGATGCAATCGGTAATTCCAATCG
GCATAGGAATAAGTGGGGGCAAATTCGAATTAAAACCTGGAAGGAGCCGT
CTACACCACCGTGTTGCTCTGGTTGCTGACACCCGAGCCCACTGTCGCAG
ATTGCGAAGAGTTGCAAATCGACTTTCCACCATGGGAGCTCTAAGGCTTC
TTTTTCGCCGAGTACTTCAATCTCGTGATGCATAACTTCATCTACTATCT
GGAAGGGGTGATCTGGGGGCAGGACGGGCCCCCTCCTCCTTTAGAAGACC
TGGGTATCAGGCTATTCGCAGGCGTTTTCCCTCCCTCGGCCGAGTGGATC
GTGGACCTCTTCCTCTACATTCTTATCGGCATGGTCCTCACCCTCTGCAT
TGCGCGTTTTGTTTTAAATAATGTTCCGTGGGGCGGACCTGAGATGTTGC
TCACTAAGAAGAGGGGAGATGGCCTGGACGTTGCCACCTGCTCGATTCCC
GTACCCTCCGTCAATATATGCAAACGTATCTGCAAGATCCTTTCCATTGC
AATCGTCTGTCGCATACTGTCCTATACGCTCACATTAGAGCCAAATCCGG
CCGCGTACTGTCACCCACCTTTTTGGAACCCTCCTAGCACCGTCAGTGAG
ATCATGAGCACGGTGGCCGTGAGGGGCAGCTGTGGGGATCTCCTCTTCTC
GAGCCACACATTCCATGGCATGGTGATGATGCTGACAATCTTGCGGCACG
CGCCGAGGATGTACGTCATCTGCGGAATGGCTGTCTGCTCGATGGTCATG
GTCGTCATCTCCCTCCTGGCATATAAGAGCCACTATTCACACGATATCGT
ACAAGACTAAGTGGCAGGCGAAGCTCGAGTTTGCCTTGCTGAAGCAGAAA
TGGAAGTGGATAGTGATGACAGGCGGTAGCAACGACAGCAGCAGCAACAT
GACAGACAACGATGCTGTGGCCAATGTCACAGATGGAGACGGTTCTACCC
GCGAGAACTTTCAAATCATTGACATCGATCCTCCTTCCTCCCCCATGAGC
TCCGCTGCCTCTACCAGCTTTCGAGAAGCTGAGGGAGGAGTAGGACTGTG
TTGTTTGCGGCGAGACCCAACCGCTTTATCTCTCTTGCCGTTTAGCATGT
TATTTGCGGCACGAACGTCGGGCGATGCAATCGGTAATTCCAATCGGCAT
AGGAATAAGTGGGGGCAAATTCGAATTAAAACCTGGAAGGAGCCGTCTAC
ACCACCGTGTTGCTCTGGTTGCTGACACCCGAGCCCACTGTCGCAGATTG
CGAAGAGTTGCAAATCGACTTTCCACCATGGGAGCTCTAAGGCTTCTTTT
TCGCCGAGTACTTCAATCTCGTGATGCATAACTTCATCTACTATCTGGAA
GGGGTGATCTGGGGGCAGGACGGGCCCCCTCCTCCTTTAGAAGACCTGGG
TATCAGGCTATTCGCAGGCGTTTTCCCTCCCTCGGCCGAGTGGATCGTGG
ACCTCTTCCTCTACATTCTTATCGGCATGGTCCTCACCCTCTGCATTGCG
CGTTTTGTTTTAAATAATGTTCCGTGGGGCGGACCTGAGATGTTGCTCAC
TAAGAAGAGGGGAGATGGCCTGGACGTTGCCACCTGCTCGATTCCCGTAC
CCTCCGTCAATATATGCAAACGTATCTGCAAGATCCTTTCCATTGCAATC
GTCTGTCGCATACTGTCCTATACGCTCACATTAGAGCCAAATCCGGCCGC
GTACTGTCACCCACCTTTTTGGAACCCTCCTAGCACCGTCAGTGAGATCA
TGAGCACGGTGGCCGTGAGGGGCAGCTGTGGGGATCTCCTCTTCTCGAGC
CACACATTCCATGGCATGGTGATGATGCTGACAATCTTGCGGCACGCGCC
GAGGATGTACGTCATCTGCGGAATGGCTGTCTGCTCGATGGTCATGGTCG
TCATCTCCCTCCTGGCATATAAGAGCCACTATTCACACGATATCGTACAA
GACTAAGTGGCAGGCGAAGCTCGAGTTTGCCTTGCTGAAGCAGAAATGGA
AGTGGATAGTGATGACAGGCGGTAGCAACGACAGCAGCAGCAACATGACA
GACAACGATGCTGTGGCCAATGTCACAGATGGAGACGGTTCTACCCGCGA
GAACTTTCAAATCATTGACATCGATCCTCCTTCCTCCCCCATGAGCTCCG
CTGCCTCTACCAGCTTTCGAGAAGCTGAGGGAGGAGTAGGACTGTGTTGT
TTGCGGCGAGACCCAACCGCTTTATCTCTCTTGCCGTTTAGCATGTTATT
TGCGGCACGAACGTCGGGCGATGCAATCGGTAATTCCAATCGGCATAGGA
ATAAGTGGGGGCAAATTCGAATTAAAACCTGGAAGGAGCCGTCTACACCA
CCGTGTTGCTCTGGTTGCTGACACCCGAGCCCACTGTCGCAGATTGCGAA
GAGTTGCAAATCGACTTTCCACCATGGGAGCTCTAAGGCTTCTTTTTCGC
CGAGTACTTCAATCTCGTGATGCATAACTTCATCTACTATCTGGAAGGGG
TGATCTGGGGGCAGGACGGGCCCCCTCCTCCTTTAGAAGACCTGGGTATC
AGGCTATTCGCAGGCGTTTTCCCTCCCTCGGCCGAGTGGATCGTGGACCT
CTTCCTCTACATTCTTATCGGCATGGTCCTCACCCTCTGCATTGCGCGTT
TTGTTTTAAATAATGTTCCGTGGGGCGGACCTGAGATGTTGCTCACTAAG
AAGAGGGGAGATGGCCTGGACGTTGCCACCTGCTCGATTCCCGTACCCTC
CGTCAATATATGCAAACGTATCTGCAAGATCCTTTCCATTGCAATCGTCT
GTCGCATACTGTCCTATACGCTCACATTAGAGCCAAATCCGGCCGCGTAC
TGTCACCCACCTTTTTGGAACCCTCCTAGCACCGTCAGTGAGATCATGAG
CACGGTGGCCGTGAGGGGCAGCTGTGGGGATCTCCTCTTCTCGAGCCACA
CATTCCATGGCATGGTGATGATGCTGACAATCTTGCGGCACGCGCCGAGG
ATGTACGTCATCTGCGGAATGGCTGTCTGCTCGATGGTCATGGTCGTCAT
CTCCCTCCTGGCATATAAGAGCCACTATTCACACGATATCGTACAAGACT
AAGTGGCAGGCGAAGCTCGAGTTTGCCTTGCTGAAGCAGAAATGGAAGTG
GATAGTGATGACAGGCGGTAGCAACGACAGCAGCAGCAACATGACAGACA
ACGATGCTGTGGCCAATGTCACAGATGGAGACGGTTCTACCCGCGAGAAC
TTTCAAATCATTGACATCGATCCTCCTTCCTCCCCCATGAGCTCCGCTGC
CTCTACCAGCTTTCGAGAAGCTGAGGGAGGAGTAGGACTGTGTTGTTTGC
GGCGAGACCCAACCGCTTTATCTCTCTTGCCGTTTAGCATGTTATTTGCG
GCACGAACGTCGGGCGATGCAATCGGTAATTCCAATCGGCATAGGAATAA
GTGGGGGCAAATTCGAATTAAAACCTGGAAGGAG back to top
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