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Properties
| Property Name | Value |
|---|
| TranscriptId | 633511 |
| Track | FilteredModels2 |
| ProteinId | 633425 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_34 | supercontig | scaffold_34:179492..180576 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9502 ID=mRNA_9502|Name=jgi.p|Nanoce1779_2|633425|organism=Nannochloropsis oceanica|type=mRNA|length=742bp
CTCGTCAACATGGATGGGTGGGTTCGGGGGCTGGGGCTTGAGCTTATGCG
GATGCTCCTCTGCGATCTCCTGGCGCCGGATGTGGTGGTCAAGATGGAGG
GCTCGTCGAAGGCCGCTGGTTTTGCTCTTCCTGCGCCCCTTCCTTCTCAC
ACCCGTGTGCTTGCAGTAGAAGCCGCGCTGCTGAAGGAGGGGGGGAGGGA
GGGAAGGAGGGAGGGAGGGAGAGGAGGAGGAGGGGGGGGAGCAGTAGCAC
AAGACACACGGACCCTGCGGTTGTTATCTTATTTTCTTGCGGGAATGCGG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAAGAGGT
AGAGGGGGAGGGGGAGACAGGGAGAGAAGGAGCAAGGGATGGAGGGGGGG
GAAGAGGCGGAGGGAGGGCGGGAGGGCGGTTCGAAGGGGTGAAGCAACGC
AATGGCGCCGTGTTGGATCCACAAGGCAAGGTGGCAGAGGCACTTGCCGG
GATGGTGCCCTATCGCATCCCTCTTTCCCGCCTCACCGTTGGTGTACTCC
AGGACGAGGTTCCACCCCACGAAACCCTCCGAGTCCTCAACGCCTCCCTC
GTCGGCCTGCACACCTTCCCTTCTTCCCTCCCTCCCTCCCTCCCTCCCTC
CATCCATCCCTCCCTCCCCAGCATTGTCCACCGTGACCCGTCCACTGGCC
TCGCCATCCTCCTTCCTTCCTCTTCCCCTCCCTCCCTCCCCT back to topprotein sequence of jgi.p|Nanoce1779_2|633425 >mRNA_9502-protein ID=mRNA_9502-protein|Name=jgi.p|Nanoce1779_2|633425|organism=Nannochloropsis oceanica|type=polypeptide|length=244bp
MDGWVRGLGLELMRMLLCDLLAPDVVVKMEGSSKAAGFALPAPLPSHTRV
LAVEAALLKEGGREGRREGGRGGGGGGAVAQDTRTLRLLSYFLAGMREEE
EEEEEEEEEEREEVEGEGETGREGARDGGGGRGGGRAGGRFEGVKQRNGA
VLDPQGKVAEALAGMVPYRIPLSRLTVGVLQDEVPPHETLRVLNASLVGL
HTFPSSLPPSLPPSIHPSLPSIVHRDPSTGLAILLPSSSPPSLP back to topmRNA from alignment at scaffold_34:179492..180576+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9502 ID=mRNA_9502|Name=jgi.p|Nanoce1779_2|633425|organism=Nannochloropsis oceanica|type=mRNA|length=1085bp|location=Sequence derived from alignment at scaffold_34:179492..180576+ (Nannochloropsis oceanica)
CTCGTCAACATGGATGGGTGGGTTCGGGGGCTGGGGCTTGAGCTTATGCG
GATGCTCCTCTGCGATCTCCTGGCGCCGGATGTGGTGGTCAAGATGGAGG
TGAGGAGGGGAAAGGAGACAGGGGGGGCAGGAGGGAGGCAGGGACGGAGA
GTAGGAAGGGAGGAAAGAAAGGAAAGAGGGAGGGTAGCTTTCGTGATGCC
GCGGACAATCGAGTAAAGGCCTTTTACCCACCTGCTTCTCCTTCCCTCCG
TTTTTTGCCCTCCCTCTCTCCCTCCCTCCCTCCTTTCCTTCCTTCCTCTA
GGGCTCGTCGAAGGCCGCTGGTTTTGCTCTTCCTGCGCCCCTTCCTTCTC
ACACCCGTGTGCTTGCAGTAGAAGCCGCGCTGCTGAAGGAGGGGGGGAGG
GAGGGAAGGAGGGAGGGAGGGAGAGGAGGAGGAGGGGGGGGAGCAGTAGC
ACAAGACACACGGACCCTGCGGTTGTTATCTTATTTTCTTGCGGGAATGC
GGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAAGAG
GTAGAGGGGGAGGGGGAGACAGGGAGAGAAGGAGCAAGGGATGGAGGGGG
GGGAAGAGGCGGAGGGAGGGCGGGAGGGCGGTTCGAAGGGGTGAAGCAAC
GCAATGGCGCCGTGTTGGATCCACAAGGCAAGGTGGCAGAGGCACTTGCC
GGGATGGTACGCCCCCCTTCCCTCCTTCCCTTCCTCCCTTCCTCCTTCCT
TCCGTCCCTCCCACTCTCCCCCAATGCCCATCCATCCAGATGCCAACGAC
TGCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCACAGGTG
CCCTATCGCATCCCTCTTTCCCGCCTCACCGTTGGTGTACTCCAGGACGA
GGTTCCACCCCACGAAACCCTCCGAGTCCTCAACGCCTCCCTCGTCGGCC
TGCACACCTTCCCTTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCATCCAT
CCCTCCCTCCCCAGCATTGTCCACCGTGACCCGTCCACTGGCCTCGCCAT
CCTCCTTCCTTCCTCTTCCCCTCCCTCCCTCCCCT back to topCoding sequence (CDS) from alignment at scaffold_34:179492..180576+ >mRNA_9502 ID=mRNA_9502|Name=jgi.p|Nanoce1779_2|633425|organism=Nannochloropsis oceanica|type=CDS|length=2196bp|location=Sequence derived from alignment at scaffold_34:179492..180576+ (Nannochloropsis oceanica)
ATGGATGGGTGGGTTCGGGGGCTGGGGCTTGAGCTTATGCGGATGCTCCT
CTGCGATCTCCTGGCGCCGGATGTGGTGGTCAAGATGGAGGGCTCGTCGA
AGGCCGCTGGTTTTGCTCTTCCTGCGCCCCTTCCTTCTCACACCCGTGTG
CTTGCAGTAGAAGCCGCGCTGCTGAAGGAGGGGGGGAGGGAGGGAAGGAG
GGAGGGAGGGAGAGGAGGAGGAGGGGGGGGAGCAGTAGCACAAGACACAC
GGACCCTGCGGTTGTTATCTTATTTTCTTGCGGGAATGCGGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAAGAGGTAGAGGGGGA
GGGGGAGACAGGGAGAGAAGGAGCAAGGGATGGAGGGGGGGGAAGAGGCG
GAGGGAGGGCGGGAGGGCGGTTCGAAGGGGTGAAGCAACGCAATGGCGCC
GTGTTGGATCCACAAGGCAAGGTGGCAGAGGCACTTGCCGGGATGGTGCC
CTATCGCATCCCTCTTTCCCGCCTCACCGTTGGTGTACTCCAGGACGAGG
TTCCACCCCACGAAACCCTCCGAGTCCTCAACGCCTCCCTCGTCGGCCTG
CACACCTTCCCTTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCATCCATCC
CTCCCTCCCCAGCATTGTCCACCGTGACCCGTCCACTGGCCTCGCCATCC
TCCTTCCTTCCTCTTCCCCTCCCTCCCTCCCCATGGATGGGTGGGTTCGG
GGGCTGGGGCTTGAGCTTATGCGGATGCTCCTCTGCGATCTCCTGGCGCC
GGATGTGGTGGTCAAGATGGAGGGCTCGTCGAAGGCCGCTGGTTTTGCTC
TTCCTGCGCCCCTTCCTTCTCACACCCGTGTGCTTGCAGTAGAAGCCGCG
CTGCTGAAGGAGGGGGGGAGGGAGGGAAGGAGGGAGGGAGGGAGAGGAGG
AGGAGGGGGGGGAGCAGTAGCACAAGACACACGGACCCTGCGGTTGTTAT
CTTATTTTCTTGCGGGAATGCGGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGAGGGAAGAGGTAGAGGGGGAGGGGGAGACAGGGAGAGA
AGGAGCAAGGGATGGAGGGGGGGGAAGAGGCGGAGGGAGGGCGGGAGGGC
GGTTCGAAGGGGTGAAGCAACGCAATGGCGCCGTGTTGGATCCACAAGGC
AAGGTGGCAGAGGCACTTGCCGGGATGGTGCCCTATCGCATCCCTCTTTC
CCGCCTCACCGTTGGTGTACTCCAGGACGAGGTTCCACCCCACGAAACCC
TCCGAGTCCTCAACGCCTCCCTCGTCGGCCTGCACACCTTCCCTTCTTCC
CTCCCTCCCTCCCTCCCTCCCTCCATCCATCCCTCCCTCCCCAGCATTGT
CCACCGTGACCCGTCCACTGGCCTCGCCATCCTCCTTCCTTCCTCTTCCC
CTCCCTCCCTCCCCATGGATGGGTGGGTTCGGGGGCTGGGGCTTGAGCTT
ATGCGGATGCTCCTCTGCGATCTCCTGGCGCCGGATGTGGTGGTCAAGAT
GGAGGGCTCGTCGAAGGCCGCTGGTTTTGCTCTTCCTGCGCCCCTTCCTT
CTCACACCCGTGTGCTTGCAGTAGAAGCCGCGCTGCTGAAGGAGGGGGGG
AGGGAGGGAAGGAGGGAGGGAGGGAGAGGAGGAGGAGGGGGGGGAGCAGT
AGCACAAGACACACGGACCCTGCGGTTGTTATCTTATTTTCTTGCGGGAA
TGCGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAA
GAGGTAGAGGGGGAGGGGGAGACAGGGAGAGAAGGAGCAAGGGATGGAGG
GGGGGGAAGAGGCGGAGGGAGGGCGGGAGGGCGGTTCGAAGGGGTGAAGC
AACGCAATGGCGCCGTGTTGGATCCACAAGGCAAGGTGGCAGAGGCACTT
GCCGGGATGGTGCCCTATCGCATCCCTCTTTCCCGCCTCACCGTTGGTGT
ACTCCAGGACGAGGTTCCACCCCACGAAACCCTCCGAGTCCTCAACGCCT
CCCTCGTCGGCCTGCACACCTTCCCTTCTTCCCTCCCTCCCTCCCTCCCT
CCCTCCATCCATCCCTCCCTCCCCAGCATTGTCCACCGTGACCCGTCCAC
TGGCCTCGCCATCCTCCTTCCTTCCTCTTCCCCTCCCTCCCTCCCC back to top
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