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Properties
| Property Name | Value |
|---|
| TranscriptId | 606275 |
| Track | FilteredModels2 |
| ProteinId | 606189 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_34 | supercontig | scaffold_34:169595..171968 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9498 ID=mRNA_9498|Name=jgi.p|Nanoce1779_2|606189|organism=Nannochloropsis oceanica|type=mRNA|length=2264bp
GCGATTCGTAGGAGATGTAAAGGATGAGAAGGTAAGAAAACAAAGTGATA
GTAAATCAAGGAAAACGGTGGGCAGCAGCTGAAAGGCGCCTTGAACACTG
CCCGTAAAAGCAGGGTTGGGCAGGATCGAGGGCACTAAGAGATAGAGAGT
TCAACAGGCAGGGTGTGCCGAAATTAAGACTTTACTTTTCGGCCAGGACG
GCTAAGGTGAGCGCAAGCAGCTATGGCTTAATGAGAACACTGCTGTCGAC
CTTTGGGAACTTTGTAGTGGAGGCGCTGTAGCGCATGTGGGGAGGTTGCT
GAGGAGTTTTGATTTAGATGAGAAGTTGCGCTCGCAAGCGAACAACTAAA
ATGAGGCTTTTTGTCTGTGGAGGAGATGCGGGTAGTACGTGTGAGTGTCC
ACGGAGCACTAAATGCATGAAATTTGATGCATCGTCGCTAAAGGGGCGGG
ATGGGGGTTGCTCGAAGTCAGAGCAAAATGTTTGCATGCAATTCTTCCAA
GCCTCCTCCTCACCCTGTCGTCTCGACTCACACAAGGCCTCTGGTATATT
TGACAACCCTGCCTATAGGAAGCAGCTTCGGACAGCAGGAAACAGCTTCG
GACGCCGAGCGACGCCTCTTGTAGACTCCCTCTCGCAGCATCACTCTCCC
TTCATCACGTCAGCTCCAGCATGCCCCAGGTCCTTCTCCCCCGGCGTGTC
CTAGACCTCCTGCCCTTAACCCTCCTGTCCTTATGCATTGTGTTGGTGCA
GGCAGGGGCATTTTCTATCCGCAGCGGCGGTTGCAGGATGGGTGCTGCGG
CTACTTCTGGCGGAATCGGCCTTCCCATCCGCTCTGCCTTGCGTTGCCTA
GGCATGACGCCCCCAAACATCTCCCTGCTGCTGGGCCGCAAGGGTGGGGC
GGCGAGCAGCAGTGATGAGAGTAGCCGCGAGATAGCTTCCTCGTGGATGC
GTACCCGGGAGGTGCGCAATGGTTATACGTCGGACGGGCGTCGTCGCCTC
CTGTCGATGGCTGAGCTGTTCGCCAGCAAGGACAGCAGCAACGAGAAGAA
GAGCCTCACCGATGGGACTTTTGCTGCATCGGGCAACAAAAATCTCTTTT
CTCGGGATGGAGTCTTCAAGTTGGCGGGCTATGCGGCCGTGGCTTACATT
GGCAAACAATTTTTCAACGGGGGCCGGTACGATGACGAACCGGATCTGAG
CGGCAAGGTGGCGGTCATCACAGGGGGTAATTCGGGCATCGGTAAGGAGA
CTGCCATTCGCCTTGCCACGCTAGGAGCCCGTGTTTTGATCGCGTGCCGC
AACTCTGAGAAGGGCGAGGCGGCGGTGCGGGACATAGTGAACGCCGTTTC
CCCCTCCTCTACAGTGGAAGGCGCGAGCCGAAAGAAGAATGCCGCCCCGC
CACAGGTGGAGAGCTTGGTGATGGACCTGTCGGACTTGAAAAGCATCGAT
CGTTTTGCGACGGAGTTGAACAAGCACGTGGATAAGGTCGATATTTTGGT
GAACAATGCGGGGGTCATGGCTGTGAGTAACTTAGAGCGGACCCAGGATG
GCTTCGAGCGCCAATTGGGTGTGAACCACTTAGGGCATTTCCACCTGACG
AACCGTCTGTTTGACTTACTGCTTAAAGGTGCGGCGACACGGGATGGGGC
GCGGATTGTGAATGTGGCGAGTGAAGCGCATCGTTTTGGAGGTTTGGACT
TGCAGGACCCAAACTATCTGACCAGGGAATACAAAAAGTGGGAGGCGTAT
GGGCAAAGCAAACTGGCCAACATTCTGTTCACCCGCGAGCTGCACCGGCG
CCTGGCCGAGAAGGGCATGGACAAAAAGGTGTTGGCTTTATGTTGTCATC
CTGGGGTGGTCCGCACGGAACTAGGCCGGTATTTGATTGATGATATTCCC
AGCGTCGGAAAGGTGGCCTTGGCCCCCGTAGCGCTGGCTGGCTGGTACTT
CACCAAGAGTCCCAAGCAAGGCTCGCAAACACAGGTCTACCTGGCCGCGA
GCCCAACGCTGAAAGACGAGGCGGAACGAGGAGCAGCGGTGGGCGGGACG
TACTTCTCCGACTGCCGTCCCAAGAAGACGACTAAGGAGGCCGAAGATTT
GGACGCGGCGGGCAAGCTTTGGAAACTGAGTGAAAAGCTCACAGGGTCAT
CGTTCTCAGTTTAGACGTAGGAGGAGATGAAGGGAGGCCTGAGATGGTGG
TGATGAGAAAAGAAAGAAAGTGGGAAGTGCTACCCCGACGATAGGAACAA
ATTATAAACGAACG back to topprotein sequence of jgi.p|Nanoce1779_2|606189 >mRNA_9498-protein ID=mRNA_9498-protein|Name=jgi.p|Nanoce1779_2|606189|organism=Nannochloropsis oceanica|type=polypeptide|length=498bp
MPQVLLPRRVLDLLPLTLLSLCIVLVQAGAFSIRSGGCRMGAAATSGGIG
LPIRSALRCLGMTPPNISLLLGRKGGAASSSDESSREIASSWMRTREVRN
GYTSDGRRRLLSMAELFASKDSSNEKKSLTDGTFAASGNKNLFSRDGVFK
LAGYAAVAYIGKQFFNGGRYDDEPDLSGKVAVITGGNSGIGKETAIRLAT
LGARVLIACRNSEKGEAAVRDIVNAVSPSSTVEGASRKKNAAPPQVESLV
MDLSDLKSIDRFATELNKHVDKVDILVNNAGVMAVSNLERTQDGFERQLG
VNHLGHFHLTNRLFDLLLKGAATRDGARIVNVASEAHRFGGLDLQDPNYL
TREYKKWEAYGQSKLANILFTRELHRRLAEKGMDKKVLALCCHPGVVRTE
LGRYLIDDIPSVGKVALAPVALAGWYFTKSPKQGSQTQVYLAASPTLKDE
AERGAAVGGTYFSDCRPKKTTKEAEDLDAAGKLWKLSEKLTGSSFSV* back to topmRNA from alignment at scaffold_34:169595..171968- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9498 ID=mRNA_9498|Name=jgi.p|Nanoce1779_2|606189|organism=Nannochloropsis oceanica|type=mRNA|length=2374bp|location=Sequence derived from alignment at scaffold_34:169595..171968- (Nannochloropsis oceanica)
GCGATTCGTAGGAGATGTAAAGGATGAGAAGGTAAGAAAACAAAGTGATA
GTAAATCAAGGAAAACGGTGGGCAGCAGCTGAAAGGCGCCTTGAACACTG
CCCGTAAAAGCAGGGTTGGGCAGGATCGAGGGCACTAAGAGATAGAGAGT
TCAACAGGCAGGGTGTGCCGAAATTAAGACTTTACTTTTCGGCCAGGACG
GCTAAGGTGAGCGCAAGCAGCTATGGCTTAATGAGAACACTGCTGTCGAC
CTTTGGGAACTTTGTAGTGGAGGCGCTGTAGCGCATGTGGGGAGGTTGCT
GAGGAGTTTTGATTTAGATGAGAAGTTGCGCTCGCAAGCGAACAACTAAA
ATGAGGCTTTTTGTCTGTGGAGGAGATGCGGGTAGTACGTGTGAGTGTCC
ACGGAGCACTAAATGCATGAAATTTGATGCATCGTCGCTAAAGGGGCGGG
ATGGGGGTTGCTCGAAGTCAGAGCAAAATGTTTGCATGCAATTCTTCCAA
GCCTCCTCCTCACCCTGTCGTCTCGACTCACACAAGGCCTCTGGTATATT
TGACAACCCTGCCTATAGGAAGCAGCTTCGGACAGCAGGAAACAGCTTCG
GACGCCGAGCGACGCCTCTTGTAGACTCCCTCTCGCAGCATCACTCTCCC
TTCATCACGTCAGCTCCAGCATGCCCCAGGTCCTTCTCCCCCGGCGTGTC
CTAGACCTCCTGCCCTTAACCCTCCTGTCCTTATGCATTGTGTTGGTGCA
GGCAGGGGCATTTTCTATCCGCAGCGGCGGTTGCAGGATGGGTGCTGCGG
CTACTTCTGGCGGAATCGGCCTTCCCATCCGCTCTGCCTTGCGTTGCCTA
GGCATGACGCCCCCAAACATCTCCCTGCTGCTGGGCCGCAAGGGTGGGGC
GGCGAGCAGCAGTGATGAGAGTAGCCGCGAGATAGCTTCCTCGTGGATGC
GTACCCGGGAGGTGCGCAATGGTTATACGTCGGACGGGCGTCGTCGCCTC
CTGTCGATGGCTGAGCTGTTCGCCAGCAAGGACAGCAGCAACGAGAAGAA
GAGCCTCACCGATGGGACTTTTGCTGCATCGGGCAACAAAAATCTCTTTT
CTCGGGATGGAGTCTTCAAGTTGGCGGGCTATGCGGCCGTGGCTTACATT
GGCAAACAATTTTTCAACGGGGGCCGGTACGATGACGAACCGGATCTGAG
CGGCAAGGTGGCGGTCATCACAGGGGGTAATTCGGGCATCGGTAAGGAGA
CTGCCATTCGCCTTGCCACGCTAGGAGCCCGTGTTTTGATCGCGTGCCGC
AACTCTGAGAAGGGCGAGGCGGCGGTGCGGGACATAGTGAACGCCGTTTC
CCCCTCCTCTACAGTGGAAGGCGCGAGCCGAAAGAAGAATGCCGCCCCGC
CACAGGTGGAGAGCTTGGTGATGGACCTGTCGGACTTGAAAAGCATCGAT
CGTTTTGCGACGGAGTTGAACAAGCACGTGGATAAGGTCGATATTTTGGT
GAACAATGCGGGGGTCATGGCTGTGAGTAACTTAGAGCGGACCCAGGATG
GCTTCGAGCGCCAATTGGGTGTGAACCACTTAGGGCATTTCCACCTGACG
AACCGTCTGTTTGACTTACTGCTTAAAGGTGCGGCGACACGGGATGGGGC
GCGGATTGTGAATGTGGCGAGTGAAGCGCATCGTTTTGGAGGTTTGGACT
TGCAGGACCCAAACTATCTGACCAGGGAATACAAAAAGTGGGAGGCGTAT
GGGCAAAGCAAACTGGCCAACATTCTGTTCACCCGCGAGCTGCACCGGCG
CCTGGCCGAGAAGGGCATGGACAAAAAGGTGTTGGCTTTATGTTGTCATC
CTGGGGTGGTCCGCACGGAACTAGGCCGGTATTTGATTGATGATATTCCC
AGCGTCGGAAAGGTGGCCTTGGCCCCCGTAGCGCTGGCTGGCTGGTACTT
CACCAAGAGTCCCAAGCAAGGGTAGGTTGGATGTCTTAATTAATCCCAAG
TGAGCAACACTTTGTCAATTAGTGCATCTCTCACACATATATATCTTTCT
TCCTCTCCCAATCCCTCATCCCCTACAACAGCTCGCAAACACAGGTCTAC
CTGGCCGCGAGCCCAACGCTGAAAGACGAGGCGGAACGAGGAGCAGCGGT
GGGCGGGACGTACTTCTCCGACTGCCGTCCCAAGAAGACGACTAAGGAGG
CCGAAGATTTGGACGCGGCGGGCAAGCTTTGGAAACTGAGTGAAAAGCTC
ACAGGGTCATCGTTCTCAGTTTAGACGTAGGAGGAGATGAAGGGAGGCCT
GAGATGGTGGTGATGAGAAAAGAAAGAAAGTGGGAAGTGCTACCCCGACG
ATAGGAACAAATTATAAACGAACG back to topCoding sequence (CDS) from alignment at scaffold_34:169595..171968- >mRNA_9498 ID=mRNA_9498|Name=jgi.p|Nanoce1779_2|606189|organism=Nannochloropsis oceanica|type=CDS|length=2988bp|location=Sequence derived from alignment at scaffold_34:169595..171968- (Nannochloropsis oceanica)
CTCGCAAACACAGGTCTACCTGGCCGCGAGCCCAACGCTGAAAGACGAGG
CGGAACGAGGAGCAGCGGTGGGCGGGACGTACTTCTCCGACTGCCGTCCC
AAGAAGACGACTAAGGAGGCCGAAGATTTGGACGCGGCGGGCAAGCTTTG
GAAACTGAGTGAAAAGCTCACAGGGTCATCGTTCTCAGTTTAGATGCCCC
AGGTCCTTCTCCCCCGGCGTGTCCTAGACCTCCTGCCCTTAACCCTCCTG
TCCTTATGCATTGTGTTGGTGCAGGCAGGGGCATTTTCTATCCGCAGCGG
CGGTTGCAGGATGGGTGCTGCGGCTACTTCTGGCGGAATCGGCCTTCCCA
TCCGCTCTGCCTTGCGTTGCCTAGGCATGACGCCCCCAAACATCTCCCTG
CTGCTGGGCCGCAAGGGTGGGGCGGCGAGCAGCAGTGATGAGAGTAGCCG
CGAGATAGCTTCCTCGTGGATGCGTACCCGGGAGGTGCGCAATGGTTATA
CGTCGGACGGGCGTCGTCGCCTCCTGTCGATGGCTGAGCTGTTCGCCAGC
AAGGACAGCAGCAACGAGAAGAAGAGCCTCACCGATGGGACTTTTGCTGC
ATCGGGCAACAAAAATCTCTTTTCTCGGGATGGAGTCTTCAAGTTGGCGG
GCTATGCGGCCGTGGCTTACATTGGCAAACAATTTTTCAACGGGGGCCGG
TACGATGACGAACCGGATCTGAGCGGCAAGGTGGCGGTCATCACAGGGGG
TAATTCGGGCATCGGTAAGGAGACTGCCATTCGCCTTGCCACGCTAGGAG
CCCGTGTTTTGATCGCGTGCCGCAACTCTGAGAAGGGCGAGGCGGCGGTG
CGGGACATAGTGAACGCCGTTTCCCCCTCCTCTACAGTGGAAGGCGCGAG
CCGAAAGAAGAATGCCGCCCCGCCACAGGTGGAGAGCTTGGTGATGGACC
TGTCGGACTTGAAAAGCATCGATCGTTTTGCGACGGAGTTGAACAAGCAC
GTGGATAAGGTCGATATTTTGGTGAACAATGCGGGGGTCATGGCTGTGAG
TAACTTAGAGCGGACCCAGGATGGCTTCGAGCGCCAATTGGGTGTGAACC
ACTTAGGGCATTTCCACCTGACGAACCGTCTGTTTGACTTACTGCTTAAA
GGTGCGGCGACACGGGATGGGGCGCGGATTGTGAATGTGGCGAGTGAAGC
GCATCGTTTTGGAGGTTTGGACTTGCAGGACCCAAACTATCTGACCAGGG
AATACAAAAAGTGGGAGGCGTATGGGCAAAGCAAACTGGCCAACATTCTG
TTCACCCGCGAGCTGCACCGGCGCCTGGCCGAGAAGGGCATGGACAAAAA
GGTGTTGGCTTTATGTTGTCATCCTGGGGTGGTCCGCACGGAACTAGGCC
GGTATTTGATTGATGATATTCCCAGCGTCGGAAAGGTGGCCTTGGCCCCC
GTAGCGCTGGCTGGCTGGTACTTCACCAAGAGTCCCAAGCAAGGCTCGCA
AACACAGGTCTACCTGGCCGCGAGCCCAACGCTGAAAGACGAGGCGGAAC
GAGGAGCAGCGGTGGGCGGGACGTACTTCTCCGACTGCCGTCCCAAGAAG
ACGACTAAGGAGGCCGAAGATTTGGACGCGGCGGGCAAGCTTTGGAAACT
GAGTGAAAAGCTCACAGGGTCATCGTTCTCAGTTTAGATGCCCCAGGTCC
TTCTCCCCCGGCGTGTCCTAGACCTCCTGCCCTTAACCCTCCTGTCCTTA
TGCATTGTGTTGGTGCAGGCAGGGGCATTTTCTATCCGCAGCGGCGGTTG
CAGGATGGGTGCTGCGGCTACTTCTGGCGGAATCGGCCTTCCCATCCGCT
CTGCCTTGCGTTGCCTAGGCATGACGCCCCCAAACATCTCCCTGCTGCTG
GGCCGCAAGGGTGGGGCGGCGAGCAGCAGTGATGAGAGTAGCCGCGAGAT
AGCTTCCTCGTGGATGCGTACCCGGGAGGTGCGCAATGGTTATACGTCGG
ACGGGCGTCGTCGCCTCCTGTCGATGGCTGAGCTGTTCGCCAGCAAGGAC
AGCAGCAACGAGAAGAAGAGCCTCACCGATGGGACTTTTGCTGCATCGGG
CAACAAAAATCTCTTTTCTCGGGATGGAGTCTTCAAGTTGGCGGGCTATG
CGGCCGTGGCTTACATTGGCAAACAATTTTTCAACGGGGGCCGGTACGAT
GACGAACCGGATCTGAGCGGCAAGGTGGCGGTCATCACAGGGGGTAATTC
GGGCATCGGTAAGGAGACTGCCATTCGCCTTGCCACGCTAGGAGCCCGTG
TTTTGATCGCGTGCCGCAACTCTGAGAAGGGCGAGGCGGCGGTGCGGGAC
ATAGTGAACGCCGTTTCCCCCTCCTCTACAGTGGAAGGCGCGAGCCGAAA
GAAGAATGCCGCCCCGCCACAGGTGGAGAGCTTGGTGATGGACCTGTCGG
ACTTGAAAAGCATCGATCGTTTTGCGACGGAGTTGAACAAGCACGTGGAT
AAGGTCGATATTTTGGTGAACAATGCGGGGGTCATGGCTGTGAGTAACTT
AGAGCGGACCCAGGATGGCTTCGAGCGCCAATTGGGTGTGAACCACTTAG
GGCATTTCCACCTGACGAACCGTCTGTTTGACTTACTGCTTAAAGGTGCG
GCGACACGGGATGGGGCGCGGATTGTGAATGTGGCGAGTGAAGCGCATCG
TTTTGGAGGTTTGGACTTGCAGGACCCAAACTATCTGACCAGGGAATACA
AAAAGTGGGAGGCGTATGGGCAAAGCAAACTGGCCAACATTCTGTTCACC
CGCGAGCTGCACCGGCGCCTGGCCGAGAAGGGCATGGACAAAAAGGTGTT
GGCTTTATGTTGTCATCCTGGGGTGGTCCGCACGGAACTAGGCCGGTATT
TGATTGATGATATTCCCAGCGTCGGAAAGGTGGCCTTGGCCCCCGTAGCG
CTGGCTGGCTGGTACTTCACCAAGAGTCCCAAGCAAGG back to top
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