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Properties
Property Name | Value |
TranscriptId | 606217 |
Track | FilteredModels2 |
ProteinId | 606131 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_34 | supercontig | scaffold_34:105001..106431 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9486 ID=mRNA_9486|Name=jgi.p|Nanoce1779_2|606131|organism=Nannochloropsis oceanica|type=mRNA|length=1431bp GCTGTTGCTCCTGCTGTTGCTGTTGTTGCTGCTGCTGATACTGTTGCCAC CAGTGATGAAGATAGAGCTGCTGCATTTCGTGCTTTCATTTCGATGCGAG CTCGCTTCACCCTTTCTTTCTTCTTCTTTTTCTTCTTCTTCTTCTCCTAC TTCTCCTCCTCCTCTTTTTCCTCCCGCTGCTCCTTTGATCTCCCTCTTCT TCACGGGTGTCCTCGCAATTTTGTCATTCCTCCTCCCTATGTCTTCCCCT TCTGTTCGTTCCTTTCTTTCTCCTCTTCCCGCCTCTTTTGCCCCTCCTGC TGCTCCTGCTCCTCCTCTTACTCCTCGTCCTTCTGCTCCTCCTCCTGCTC CTCGTCCTCCTGCTCCTCCTGCTCCTGCTCCTCCTCCTCCTCTTCTTCCT ACGTTCCCTCCATTTCCTGCCCTGTACGACTCTCTTACCAATTCTTCCGC CTTCCTCTCATCCCCAAGCATCAATATCATGGTCGTCTCCCCCACCGCTA TGTGTAAACATGTTCTCGCATTATCATCGTAACCCGCCGCCTCCCTGCGC CTCCCACCCTCTTTCCATCCCTCTCTCTTCGCAGCTTCTCTAAGTTCTCT CCCTAGTGCCGAGGTTCCAGCGGGGAGGGTAAGCGTACTTTCACTGCTGA TGCTCTTGCTGCTTTCCCTATCGTTGTTGTCGCTACTCTTGCTACTGTTA CTGTTACCACTGTCGCTGATGCTGGTGCCGATCCCTTCTCTTCCCTGCTC GTGGTGGTGGTGCTGCTGCTGCTGGAGAAAGAGGGGCGAGGAGGGGGGAG AGGAAGAGGGAGAAGAGGAGAGGGAGGAATGGATGGAGGCAGCCATCTTG CTTTGTGTTTCGGGGGGCGGAGAAAGAGTAAGAGCCAAGCCCGAAGCATG TGTGGCCTTCAGGTCGATCACTGCCACTACCTCCCCTCCTTCCTTCTCAT CCTCGTCCTCCATCCCGTCCTCGTCCTTCCCTTCTCTCCTATCGACAGCG GCTTGCCTGAGAACCAACAAACCGTCTTCCTGAGAAACTTCCACGCTGTA AGACTCCGTGCTCCATGTGTCTTGGGCAGTGTAGAGCTTTGCCAAAGCAA TGCCATTGCTGTTGATGCTGGTGGTTGTCTTGTCGATGCCGATGGTGTTA CTGCTTGTCATTGTCTTTGTACTTATCGCGGCCAGATCAGACGGGTAAGT GATGGAAGAAGGGAAGGACGACACAGAGAACGTGCCCGAGCAGGACGAGG AGCGGGAGGAAGGCGGGGAGCAAAAGGAGGAGGAGGAGCCGGAGGGGTCC TCGGCAGCGGCCGGTAGCATAATAGGCTCATGTACAGAAGTCGAAGGAGG ACGAGACGCTACAACATCTATTATCATGGCGGACGAGACAGACTCCATCT CCATCTTCGCTTGAGGCTGGAGGCGACCTGT back to topprotein sequence of jgi.p|Nanoce1779_2|606131 >mRNA_9486-protein ID=mRNA_9486-protein|Name=jgi.p|Nanoce1779_2|606131|organism=Nannochloropsis oceanica|type=polypeptide|length=163bp MDGGSHLALCFGGRRKSKSQARSMCGLQVDHCHYLPSFLLILVLHPVLVL PFSPIDSGLPENQQTVFLRNFHAVRLRAPCVLGSVELCQSNAIAVDAGGC LVDADGVTACHCLCTYRGQIRRVSDGRREGRHRERARAGRGAGGRRGAKG GGGAGGVLGSGR* back to topmRNA from alignment at scaffold_34:105001..106431- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9486 ID=mRNA_9486|Name=jgi.p|Nanoce1779_2|606131|organism=Nannochloropsis oceanica|type=mRNA|length=1431bp|location=Sequence derived from alignment at scaffold_34:105001..106431- (Nannochloropsis oceanica) GCTGTTGCTCCTGCTGTTGCTGTTGTTGCTGCTGCTGATACTGTTGCCAC
CAGTGATGAAGATAGAGCTGCTGCATTTCGTGCTTTCATTTCGATGCGAG
CTCGCTTCACCCTTTCTTTCTTCTTCTTTTTCTTCTTCTTCTTCTCCTAC
TTCTCCTCCTCCTCTTTTTCCTCCCGCTGCTCCTTTGATCTCCCTCTTCT
TCACGGGTGTCCTCGCAATTTTGTCATTCCTCCTCCCTATGTCTTCCCCT
TCTGTTCGTTCCTTTCTTTCTCCTCTTCCCGCCTCTTTTGCCCCTCCTGC
TGCTCCTGCTCCTCCTCTTACTCCTCGTCCTTCTGCTCCTCCTCCTGCTC
CTCGTCCTCCTGCTCCTCCTGCTCCTGCTCCTCCTCCTCCTCTTCTTCCT
ACGTTCCCTCCATTTCCTGCCCTGTACGACTCTCTTACCAATTCTTCCGC
CTTCCTCTCATCCCCAAGCATCAATATCATGGTCGTCTCCCCCACCGCTA
TGTGTAAACATGTTCTCGCATTATCATCGTAACCCGCCGCCTCCCTGCGC
CTCCCACCCTCTTTCCATCCCTCTCTCTTCGCAGCTTCTCTAAGTTCTCT
CCCTAGTGCCGAGGTTCCAGCGGGGAGGGTAAGCGTACTTTCACTGCTGA
TGCTCTTGCTGCTTTCCCTATCGTTGTTGTCGCTACTCTTGCTACTGTTA
CTGTTACCACTGTCGCTGATGCTGGTGCCGATCCCTTCTCTTCCCTGCTC
GTGGTGGTGGTGCTGCTGCTGCTGGAGAAAGAGGGGCGAGGAGGGGGGAG
AGGAAGAGGGAGAAGAGGAGAGGGAGGAATGGATGGAGGCAGCCATCTTG
CTTTGTGTTTCGGGGGGCGGAGAAAGAGTAAGAGCCAAGCCCGAAGCATG
TGTGGCCTTCAGGTCGATCACTGCCACTACCTCCCCTCCTTCCTTCTCAT
CCTCGTCCTCCATCCCGTCCTCGTCCTTCCCTTCTCTCCTATCGACAGCG
GCTTGCCTGAGAACCAACAAACCGTCTTCCTGAGAAACTTCCACGCTGTA
AGACTCCGTGCTCCATGTGTCTTGGGCAGTGTAGAGCTTTGCCAAAGCAA
TGCCATTGCTGTTGATGCTGGTGGTTGTCTTGTCGATGCCGATGGTGTTA
CTGCTTGTCATTGTCTTTGTACTTATCGCGGCCAGATCAGACGGGTAAGT
GATGGAAGAAGGGAAGGACGACACAGAGAACGTGCCCGAGCAGGACGAGG
AGCGGGAGGAAGGCGGGGAGCAAAAGGAGGAGGAGGAGCCGGAGGGGTCC
TCGGCAGCGGCCGGTAGCATAATAGGCTCATGTACAGAAGTCGAAGGAGG
ACGAGACGCTACAACATCTATTATCATGGCGGACGAGACAGACTCCATCT
CCATCTTCGCTTGAGGCTGGAGGCGACCTGT back to topCoding sequence (CDS) from alignment at scaffold_34:105001..106431- >mRNA_9486 ID=mRNA_9486|Name=jgi.p|Nanoce1779_2|606131|organism=Nannochloropsis oceanica|type=CDS|length=489bp|location=Sequence derived from alignment at scaffold_34:105001..106431- (Nannochloropsis oceanica) ATGGATGGAGGCAGCCATCTTGCTTTGTGTTTCGGGGGGCGGAGAAAGAG TAAGAGCCAAGCCCGAAGCATGTGTGGCCTTCAGGTCGATCACTGCCACT ACCTCCCCTCCTTCCTTCTCATCCTCGTCCTCCATCCCGTCCTCGTCCTT CCCTTCTCTCCTATCGACAGCGGCTTGCCTGAGAACCAACAAACCGTCTT CCTGAGAAACTTCCACGCTGTAAGACTCCGTGCTCCATGTGTCTTGGGCA GTGTAGAGCTTTGCCAAAGCAATGCCATTGCTGTTGATGCTGGTGGTTGT CTTGTCGATGCCGATGGTGTTACTGCTTGTCATTGTCTTTGTACTTATCG CGGCCAGATCAGACGGGTAAGTGATGGAAGAAGGGAAGGACGACACAGAG AACGTGCCCGAGCAGGACGAGGAGCGGGAGGAAGGCGGGGAGCAAAAGGA GGAGGAGGAGCCGGAGGGGTCCTCGGCAGCGGCCGGTAG back to top
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