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Properties
| Property Name | Value |
|---|
| TranscriptId | 642531 |
| Track | FilteredModels2 |
| ProteinId | 642445 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_34 | supercontig | scaffold_34:69445..70909 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9472 ID=mRNA_9472|Name=jgi.p|Nanoce1779_2|642445|organism=Nannochloropsis oceanica|type=mRNA|length=888bp
ATGGCTGCTCGTTCCCCTCCTCGTTCCCTTTCCCCATCCATCCCCTCCCG
CGGCTCCCGTCGCCTCCCTATCTACACGCAACTCGCCGCACTCCCCGGTC
TCCCTTCTCCCTTCCCTCCTTCCTCCCTCCCTCCCTTCATCCCGACACTC
ATTCCCATCCGTATCGACGTGGACATTGGCGGCATTCGTGTGATCGACTC
CTTCTCCATCGATCCGCATGACTCCTCCCTCACTCCTGAGCAATGGGCAA
GGCAATTGTGTGTGGATTTAGAGCTACCGGCCCCGCAAGAGTTTGAGCGA
CGCATCGCTCACAGTATAAGAAAACAGCTCGTCACCTACGCGCATGATGT
AGCCCTCCTCTCCCCTATCTACACCTCCACCTCATCGTCCCCATCGTCGT
CCCCTTCCCACCCGCCGGCATCACAAGTACAACCACCAGAACCAGTAAGA
GGACACCTCTGCCCCATCCTCCTCAATGTCCGCGGGCCAGGCGGTCTAAC
CTACAAAGAAATCATTGAATGGGACGTTTTTGACCCTCTCAATGCCCCAG
AACTCCTCGCCATGCACACGGTGGCCGACTTAGGCCTCCCCCCCTCCTTC
GAACCCGCCATCGCCCTCTCTGTTCGTGAGCAGGTTCTGAACTTTCGATT
CATGCTCCGCACGGGGCGTCCACCCTCAAGTGAGGAGGAGGTAGGGGTGG
CAGTGTACGAGGGAGGATTGGATGAGAGGGTAAGATTTGCCGCAGATTTC
TTGAGGCTAGCGCAGCCACGGAGGCAAGAACAGCAGCAGCAGCAACGACT
GTATGCCGCGAAGGAGGAGGTGGAAAAGGGGGGGGGGGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGCACGGCAGGCATTGCGCTGA back to topprotein sequence of jgi.p|Nanoce1779_2|642445 >mRNA_9472-protein ID=mRNA_9472-protein|Name=jgi.p|Nanoce1779_2|642445|organism=Nannochloropsis oceanica|type=polypeptide|length=296bp
MAARSPPRSLSPSIPSRGSRRLPIYTQLAALPGLPSPFPPSSLPPFIPTL
IPIRIDVDIGGIRVIDSFSIDPHDSSLTPEQWARQLCVDLELPAPQEFER
RIAHSIRKQLVTYAHDVALLSPIYTSTSSSPSSSPSHPPASQVQPPEPVR
GHLCPILLNVRGPGGLTYKEIIEWDVFDPLNAPELLAMHTVADLGLPPSF
EPAIALSVREQVLNFRFMLRTGRPPSSEEEVGVAVYEGGLDERVRFAADF
LRLAQPRRQEQQQQQRLYAAKEEVEKGGGGGGGGGGGGGARQALR* back to topmRNA from alignment at scaffold_34:69445..70909- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9472 ID=mRNA_9472|Name=jgi.p|Nanoce1779_2|642445|organism=Nannochloropsis oceanica|type=mRNA|length=1465bp|location=Sequence derived from alignment at scaffold_34:69445..70909- (Nannochloropsis oceanica)
ATGGCTGCTCGTTCCCCTCCTCGTTCCCTTTCCCCATCCATCCCCTCCCG
CGGCTCCCGTCGCCTCCCTATCTACACGCAACTCGCCGCACTCCCCGGTC
TCCCTTCTCCCTTCCCTCCTTCCTCCCTCCCTCCCTTCATCCCGACACTC
ATTCCCATCCGTATCGACGTGGACATTGGCGGCATTCGTGTGATCGACTC
CTTCTCCATCGATCCGCATGACTCCTCCCTCACTCCTGAGCAATGGGCAA
GGCAATTGTGTGTGGATTTAGAGCTACCGGCCCCGCAAGAGTTTGAGCGA
CGCATCGCTCACAGTATAAGGTATGTAAATATACGCGTGGGCAGATGGTG
GAGTGATGAAGGGATGAGAGGATGCCAGAGAGCGGGAGAGTGGAAAAGGA
ATGGCCAGCATCCCTGATTTTTAACCTCTCACACCCCTCCCCTGCCGTCC
TTCGGGCACTCTACCCATCAATCACAGAAAACAGCTCGTCACCTACGCGC
ATGATGTAGCCCTCCTCTCCCCTATCTACACCTCCACCTCATCGTCCCCA
TCGTCGTCCCCTTCCCACCCGCCGGCATCACAAGTACAACCACCAGAACC
AGTAAGAGGACACCTCTGCCCCATCCTCCTCAATGTCCGCGGGCCAGGCG
GTCTAACCTACAAAGAAATCATTGAATGGGACGTTTTTGACCCTCTCAAT
GCCCCAGAACTCCTCGCCATGCACACGGTGGCCGACTTAGGTATATGAAA
AGCAAGCCCTCCCTCCCTCCCTCCCTCCCCCCCTCCCTCCCGCCTTCCCA
TGTTTTCTACCCACCTCCCTCCTTCCCTCCAGGCCTCCCCCCCTCCTTCG
AACCCGCCATCGCCCTCTCTGTTCGTGAGCAGGTTCTGAACTTTCGATTC
ATGCTCCGCACGGGGCGTCCACCCTCAGTACTTGCAGAAGCAGAGATCCT
CACGTGGGGTATGGACAACACAACCCCCCTCCTTCGCTCCCTCCCTCCCT
CTCTTCCTCCCTCCGTCGTGAAGAGTGAGGAGGAGGTAGGGGTGGCAGTG
TACGAGGGAGGATTGGATGAGAGGGTAAGATTTGCCGCAGATTTCTTGAG
GCTAGCGCAGCCACGGAGGCAAGAACAGCAGCAGCAGCAACGACTGTATG
CCGCGGTAGGAATGGGAGGAGGGGAGGGAAGGGACGGAGGAAGGGGACAA
GCACATTCACTTCAGCTGCAGCAGCAGCATCAGCAGCATCAATCGACCGT
ATCGCAGGCACACGCAAGAGGGAGGGAGGGAGGGAAGGAAGGAGGTGGCA
CTGCGCAACAACAGTTTGATGAATATTGGAAGGGTCTGACACTTGAGCAA
CAGCAACAATACACGGCGTGGTATTACTCATCTAGAGAAGGAGGAGGTGG
AAAAGGGGGGGGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCACGG
CAGGCATTGCGCTGA back to topCoding sequence (CDS) from alignment at scaffold_34:69445..70909- >mRNA_9472 ID=mRNA_9472|Name=jgi.p|Nanoce1779_2|642445|organism=Nannochloropsis oceanica|type=CDS|length=4440bp|location=Sequence derived from alignment at scaffold_34:69445..70909- (Nannochloropsis oceanica)
AAGGAGGAGGTGGAAAAGGGGGGGGGGGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGCACGGCAGGCATTGCGCTGAAGTGAGGAGGAGGTAGGGGTGG
CAGTGTACGAGGGAGGATTGGATGAGAGGGTAAGATTTGCCGCAGATTTC
TTGAGGCTAGCGCAGCCACGGAGGCAAGAACAGCAGCAGCAGCAACGACT
GTATGCCGCGGCCTCCCCCCCTCCTTCGAACCCGCCATCGCCCTCTCTGT
TCGTGAGCAGGTTCTGAACTTTCGATTCATGCTCCGCACGGGGCGTCCAC
CCTCAAAAACAGCTCGTCACCTACGCGCATGATGTAGCCCTCCTCTCCCC
TATCTACACCTCCACCTCATCGTCCCCATCGTCGTCCCCTTCCCACCCGC
CGGCATCACAAGTACAACCACCAGAACCAGTAAGAGGACACCTCTGCCCC
ATCCTCCTCAATGTCCGCGGGCCAGGCGGTCTAACCTACAAAGAAATCAT
TGAATGGGACGTTTTTGACCCTCTCAATGCCCCAGAACTCCTCGCCATGC
ACACGGTGGCCGACTTAGATGGCTGCTCGTTCCCCTCCTCGTTCCCTTTC
CCCATCCATCCCCTCCCGCGGCTCCCGTCGCCTCCCTATCTACACGCAAC
TCGCCGCACTCCCCGGTCTCCCTTCTCCCTTCCCTCCTTCCTCCCTCCCT
CCCTTCATCCCGACACTCATTCCCATCCGTATCGACGTGGACATTGGCGG
CATTCGTGTGATCGACTCCTTCTCCATCGATCCGCATGACTCCTCCCTCA
CTCCTGAGCAATGGGCAAGGCAATTGTGTGTGGATTTAGAGCTACCGGCC
CCGCAAGAGTTTGAGCGACGCATCGCTCACAGTATAAGAAGGAGGAGGTG
GAAAAGGGGGGGGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCACG
GCAGGCATTGCGCTGAAGTGAGGAGGAGGTAGGGGTGGCAGTGTACGAGG
GAGGATTGGATGAGAGGGTAAGATTTGCCGCAGATTTCTTGAGGCTAGCG
CAGCCACGGAGGCAAGAACAGCAGCAGCAGCAACGACTGTATGCCGCGGC
CTCCCCCCCTCCTTCGAACCCGCCATCGCCCTCTCTGTTCGTGAGCAGGT
TCTGAACTTTCGATTCATGCTCCGCACGGGGCGTCCACCCTCAAAAACAG
CTCGTCACCTACGCGCATGATGTAGCCCTCCTCTCCCCTATCTACACCTC
CACCTCATCGTCCCCATCGTCGTCCCCTTCCCACCCGCCGGCATCACAAG
TACAACCACCAGAACCAGTAAGAGGACACCTCTGCCCCATCCTCCTCAAT
GTCCGCGGGCCAGGCGGTCTAACCTACAAAGAAATCATTGAATGGGACGT
TTTTGACCCTCTCAATGCCCCAGAACTCCTCGCCATGCACACGGTGGCCG
ACTTAGATGGCTGCTCGTTCCCCTCCTCGTTCCCTTTCCCCATCCATCCC
CTCCCGCGGCTCCCGTCGCCTCCCTATCTACACGCAACTCGCCGCACTCC
CCGGTCTCCCTTCTCCCTTCCCTCCTTCCTCCCTCCCTCCCTTCATCCCG
ACACTCATTCCCATCCGTATCGACGTGGACATTGGCGGCATTCGTGTGAT
CGACTCCTTCTCCATCGATCCGCATGACTCCTCCCTCACTCCTGAGCAAT
GGGCAAGGCAATTGTGTGTGGATTTAGAGCTACCGGCCCCGCAAGAGTTT
GAGCGACGCATCGCTCACAGTATAAGAAGGAGGAGGTGGAAAAGGGGGGG
GGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCACGGCAGGCATTGCG
CTGAAGTGAGGAGGAGGTAGGGGTGGCAGTGTACGAGGGAGGATTGGATG
AGAGGGTAAGATTTGCCGCAGATTTCTTGAGGCTAGCGCAGCCACGGAGG
CAAGAACAGCAGCAGCAGCAACGACTGTATGCCGCGGCCTCCCCCCCTCC
TTCGAACCCGCCATCGCCCTCTCTGTTCGTGAGCAGGTTCTGAACTTTCG
ATTCATGCTCCGCACGGGGCGTCCACCCTCAAAAACAGCTCGTCACCTAC
GCGCATGATGTAGCCCTCCTCTCCCCTATCTACACCTCCACCTCATCGTC
CCCATCGTCGTCCCCTTCCCACCCGCCGGCATCACAAGTACAACCACCAG
AACCAGTAAGAGGACACCTCTGCCCCATCCTCCTCAATGTCCGCGGGCCA
GGCGGTCTAACCTACAAAGAAATCATTGAATGGGACGTTTTTGACCCTCT
CAATGCCCCAGAACTCCTCGCCATGCACACGGTGGCCGACTTAGATGGCT
GCTCGTTCCCCTCCTCGTTCCCTTTCCCCATCCATCCCCTCCCGCGGCTC
CCGTCGCCTCCCTATCTACACGCAACTCGCCGCACTCCCCGGTCTCCCTT
CTCCCTTCCCTCCTTCCTCCCTCCCTCCCTTCATCCCGACACTCATTCCC
ATCCGTATCGACGTGGACATTGGCGGCATTCGTGTGATCGACTCCTTCTC
CATCGATCCGCATGACTCCTCCCTCACTCCTGAGCAATGGGCAAGGCAAT
TGTGTGTGGATTTAGAGCTACCGGCCCCGCAAGAGTTTGAGCGACGCATC
GCTCACAGTATAAGAAGGAGGAGGTGGAAAAGGGGGGGGGGGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGCACGGCAGGCATTGCGCTGAAGTGAGGA
GGAGGTAGGGGTGGCAGTGTACGAGGGAGGATTGGATGAGAGGGTAAGAT
TTGCCGCAGATTTCTTGAGGCTAGCGCAGCCACGGAGGCAAGAACAGCAG
CAGCAGCAACGACTGTATGCCGCGGCCTCCCCCCCTCCTTCGAACCCGCC
ATCGCCCTCTCTGTTCGTGAGCAGGTTCTGAACTTTCGATTCATGCTCCG
CACGGGGCGTCCACCCTCAAAAACAGCTCGTCACCTACGCGCATGATGTA
GCCCTCCTCTCCCCTATCTACACCTCCACCTCATCGTCCCCATCGTCGTC
CCCTTCCCACCCGCCGGCATCACAAGTACAACCACCAGAACCAGTAAGAG
GACACCTCTGCCCCATCCTCCTCAATGTCCGCGGGCCAGGCGGTCTAACC
TACAAAGAAATCATTGAATGGGACGTTTTTGACCCTCTCAATGCCCCAGA
ACTCCTCGCCATGCACACGGTGGCCGACTTAGATGGCTGCTCGTTCCCCT
CCTCGTTCCCTTTCCCCATCCATCCCCTCCCGCGGCTCCCGTCGCCTCCC
TATCTACACGCAACTCGCCGCACTCCCCGGTCTCCCTTCTCCCTTCCCTC
CTTCCTCCCTCCCTCCCTTCATCCCGACACTCATTCCCATCCGTATCGAC
GTGGACATTGGCGGCATTCGTGTGATCGACTCCTTCTCCATCGATCCGCA
TGACTCCTCCCTCACTCCTGAGCAATGGGCAAGGCAATTGTGTGTGGATT
TAGAGCTACCGGCCCCGCAAGAGTTTGAGCGACGCATCGCTCACAGTATA
AGAAGGAGGAGGTGGAAAAGGGGGGGGGGGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGCACGGCAGGCATTGCGCTGAAGTGAGGAGGAGGTAGGGGT
GGCAGTGTACGAGGGAGGATTGGATGAGAGGGTAAGATTTGCCGCAGATT
TCTTGAGGCTAGCGCAGCCACGGAGGCAAGAACAGCAGCAGCAGCAACGA
CTGTATGCCGCGGCCTCCCCCCCTCCTTCGAACCCGCCATCGCCCTCTCT
GTTCGTGAGCAGGTTCTGAACTTTCGATTCATGCTCCGCACGGGGCGTCC
ACCCTCAAAAACAGCTCGTCACCTACGCGCATGATGTAGCCCTCCTCTCC
CCTATCTACACCTCCACCTCATCGTCCCCATCGTCGTCCCCTTCCCACCC
GCCGGCATCACAAGTACAACCACCAGAACCAGTAAGAGGACACCTCTGCC
CCATCCTCCTCAATGTCCGCGGGCCAGGCGGTCTAACCTACAAAGAAATC
ATTGAATGGGACGTTTTTGACCCTCTCAATGCCCCAGAACTCCTCGCCAT
GCACACGGTGGCCGACTTAGATGGCTGCTCGTTCCCCTCCTCGTTCCCTT
TCCCCATCCATCCCCTCCCGCGGCTCCCGTCGCCTCCCTATCTACACGCA
ACTCGCCGCACTCCCCGGTCTCCCTTCTCCCTTCCCTCCTTCCTCCCTCC
CTCCCTTCATCCCGACACTCATTCCCATCCGTATCGACGTGGACATTGGC
GGCATTCGTGTGATCGACTCCTTCTCCATCGATCCGCATGACTCCTCCCT
CACTCCTGAGCAATGGGCAAGGCAATTGTGTGTGGATTTAGAGCTACCGG
CCCCGCAAGAGTTTGAGCGACGCATCGCTCACAGTATAAG back to top
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