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Properties
| Property Name | Value |
|---|
| TranscriptId | 606166 |
| Track | FilteredModels2 |
| ProteinId | 606080 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_34 | supercontig | scaffold_34:55721..57797 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9467 ID=mRNA_9467|Name=jgi.p|Nanoce1779_2|606080|organism=Nannochloropsis oceanica|type=mRNA|length=1259bp
ACAGATAACAGCAAAGTTTCATACCATCCGAAGCATGCCGACCTATTTGG
GCATCGAAGGCGGGGGCACCACCTGGAAGGTGGCTATCGCCCAAGACAAG
CCGGACAACATCACAGAATCCATTCGCTTTGACACGACGAGCCCCGAAGA
GACCTTTGGCAAGATCAAGGAATGGATAAAGGACAAGAATTACGACTCTG
TGGGCATTGCCACCTTCGGACCTGTGGACCCTAAACTCACTTCGCCGACA
TATGGCCACATCACCACCACCCCCAAGCCTGGCTGGAAGAACGTTGACGT
CGTGGGCGCCTTGACGGATGGCAGCAAACCCATTCTCTTCGACACAGACG
TGAACGCCCCCGCCCTGGCCGAGTTCACCTTCCATGCCTCCTCCCCTACG
CAATCCTCAGTGGCCTACATCACGGTCGGCACGGGGGTGGGCGTCGGGCT
GGTGATCAATGGGAAGACGGTGCATGGCCTCGTGCACCCAGAGGGCGGGC
ACGTCCCTCCCTTCCGTCTGCCTTCGGACGGGATTAAAGGGAACGACCTG
TACAAGGACATCGAGGGTCTCTCCAACACCATCGCCATTGCCAGTAAGAA
GGGCATTGACAGGCACTTGCTCAAGACCATAGGAGATGATGACGCGGTAT
GGGACAGCGTGGCCCATGCCTTGGGCTCTCTTTGCGCGACGTTGGTCCTG
ATGGTGTCCGTGGAGAGGATCGTCATCTCCGGTGGCGTCTTGAACCGCAC
CATCCTCTACCCCAAAATCCGGGCCAAGACCCTCGAGATTCTGAAAGGGT
ATATCGTGCACCCGCTCCTCACGCCCGCCCTCATCGACCAGTACATCACC
CCCTCCGAGTGGGGAGACAACGCCGGCATCGTGGGGGCCTTGACGCTGGC
TAAGGTCGCCCTAGACGACAAGGGGAAAAACTCGGTGCTGGGGAAGGCAC
GGGCATATGTGTGCAAACACGGAGCGGCGGTGTTTCTCGGCGTGGTCTTG
GGGGCTGCCGCCACTGCGGTGGGTGTCTTTGGGAAGCGGAAGTAGGCGAG
GACAAGGGAGGGAGGGAAGGACAGGAGAAATCGTATGCGCCTTCCTCACA
GCCGGGAAATGAAAGGAATGTCGGGACGGATGAAAAAGAGGGTGGGATCA
TTGGCAACAGGTTGATCAAGAACAGCAGCAGTAGTAGTAGCAGCAGCAGC
AGCGGCAGCGGAATACAGATAGAAAGGAAATGCATCCAGAAGGCGAAGGG
AGGGAGGGA back to topprotein sequence of jgi.p|Nanoce1779_2|606080 >mRNA_9467-protein ID=mRNA_9467-protein|Name=jgi.p|Nanoce1779_2|606080|organism=Nannochloropsis oceanica|type=polypeptide|length=337bp
MPTYLGIEGGGTTWKVAIAQDKPDNITESIRFDTTSPEETFGKIKEWIKD
KNYDSVGIATFGPVDPKLTSPTYGHITTTPKPGWKNVDVVGALTDGSKPI
LFDTDVNAPALAEFTFHASSPTQSSVAYITVGTGVGVGLVINGKTVHGLV
HPEGGHVPPFRLPSDGIKGNDLYKDIEGLSNTIAIASKKGIDRHLLKTIG
DDDAVWDSVAHALGSLCATLVLMVSVERIVISGGVLNRTILYPKIRAKTL
EILKGYIVHPLLTPALIDQYITPSEWGDNAGIVGALTLAKVALDDKGKNS
VLGKARAYVCKHGAAVFLGVVLGAAATAVGVFGKRK* back to topmRNA from alignment at scaffold_34:55721..57797- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9467 ID=mRNA_9467|Name=jgi.p|Nanoce1779_2|606080|organism=Nannochloropsis oceanica|type=mRNA|length=2077bp|location=Sequence derived from alignment at scaffold_34:55721..57797- (Nannochloropsis oceanica)
ACAGATAACAGCAAAGTTTCATACCATCCGAAGCATGCCGACCTATTTGG
GCATCGAAGGCGGGGGCACCACCTGGAAGGCAAGTCGTCGTGTTCAAGTC
CCTCCCCCGTATTGTTCTTTATGTCTTAGTCTTCGTCCCATTCCTTCGTT
TGTTCTAAACCCACGACTCAACCACAAACTCAGGTGGCTATCGCCCAAGA
CAAGCCGGACAACATCACAGAATCCATTCGCTTTGACACGACGAGCCCCG
AAGAGACCTTTGGCAAGATCAAGGTATGTAGTTCGGCCTGTCTCCCTTTT
TCTTCGCCCTTTGTGCCAAACACGACTATGAGCTCTTTGTTTCTATGGAC
TCGCCAAGACAGCGCTACATCAGCCGACCGATGATCTTCACGGCTGCCTT
CCGTCGTTGTCTTGGCCATGCCTGCCTCCTCTGGTACTCTTTTCTCATTC
CCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCAGGAA
TGGATAAAGGACAAGAATTACGACTCTGTGGGCATTGCCACCTTCGGACC
TGTGGACCCTAAACTCACTTCGCCGACATATGGCCACATCACCACCACCC
CCAAGCCTGGCTGGAAGAACGTTGACGTCGTGGGCGCCTTGACGGGTACT
TGAACCCTTCCTCGGTCCTTGCTGCCCACCTGCCTGTCCTTTCCCCCCTT
CTCTCCTCCGTCCCCTCTTCTCCTCGAGCCACCGTAAATAATGTGCACGC
TTCGTCCCCCCCCTTCCTTCCTCCTTCCATTCGCAACAGATGGCAGCAAA
CCCATTCTCTTCGACACAGACGTGAACGCCCCCGCCCTGGCCGAGTTCAC
CTTCCATGCCTCCTCCCCTACGCAATCCTCAGTGGCCTACATCACGGTCG
GCACGGGGGTGGGCGTCGGGCTGGTGATCAATGGGAAGACGGTGCATGGC
CTCGTGCACCCAGAGGGCGGGCACGTCCCTCCCTTCCGTCTGCCTTCGGA
CGGGATTAAAGGTTCTTTGCTTCCCTCCCTCCCTCCCTCCATAATTTCCT
CCTTTCCTCTTTGTCTGCCTGCCTTCGTCTGCCTTTTTCTGCCAACAAGA
GGAAAAGAAGTGTGATTGGTCAGTCCCTCCAAATCTCGCCTAACCCTCCC
TCTCCCCTTCCCTTCCCCCCCTCCCTCCCTCCCTCCCACAGGGAACGACC
TGTACAAGGACATCGAGGGTCTCTCCAACACCATCGCCATTGCCAGTAAG
AAGGGCATTGACAGGCACTTGCTCAAGACCATAGGAGATGATGACGCGGT
ATGGGACAGCGTGGCCCATGCCTTGGGCTCTCTTTGCGCGACGTTGGTCC
TGATGGTGTCCGTGGAGAGGATCGTCATCTCCGGTGGTGAGGGAAAGGAA
GGGGGGAGAGGGGGAGGGAGGGAGGGATGGAAGGAAGACGGGGGCTGCAT
CACAACTCATCCTCGTGGGTATTAATCCTATTTGTTTACATCCTTTTGCT
CCCCCCCTCCCTCCCTCCATCCCTCCCTCCCTCCTTTCCCCCCCTCCTTC
AGGCGTCTTGAACCGCACCATCCTCTACCCCAAAATCCGGGCCAAGACCC
TCGAGATTCTGAAAGGGTATATCGTGCACCCGCTCCTCACGCCCGCCCTC
ATCGACCAGTACATCACCCCCTCCGAGTGGGGAGACAACGCCGGCATCGT
GGGGGCCTTGACGCTGGCTAAGGTCGCCCTAGACGACAAGGGGAAAAACT
CGGTGCTGGGGAAGGCACGGGCATATGTGTGCAAACACGGAGCGGCGGTG
TTTCTCGGCGTGGTCTTGGGGGCTGCCGCCACTGCGGTGGGTGTCTTTGG
GAAGCGGAAGTAGGCGAGGACAAGGGAGGGAGGGAAGGACAGGAGAAATC
GTATGCGCCTTCCTCACAGCCGGGAAATGAAAGGAATGTCGGGACGGATG
AAAAAGAGGGTGGGATCATTGGCAACAGGTTGATCAAGAACAGCAGCAGT
AGTAGTAGCAGCAGCAGCAGCGGCAGCGGAATACAGATAGAAAGGAAATG
CATCCAGAAGGCGAAGGGAGGGAGGGA back to topCoding sequence (CDS) from alignment at scaffold_34:55721..57797- >mRNA_9467 ID=mRNA_9467|Name=jgi.p|Nanoce1779_2|606080|organism=Nannochloropsis oceanica|type=CDS|length=6066bp|location=Sequence derived from alignment at scaffold_34:55721..57797- (Nannochloropsis oceanica)
GCGTCTTGAACCGCACCATCCTCTACCCCAAAATCCGGGCCAAGACCCTC
GAGATTCTGAAAGGGTATATCGTGCACCCGCTCCTCACGCCCGCCCTCAT
CGACCAGTACATCACCCCCTCCGAGTGGGGAGACAACGCCGGCATCGTGG
GGGCCTTGACGCTGGCTAAGGTCGCCCTAGACGACAAGGGGAAAAACTCG
GTGCTGGGGAAGGCACGGGCATATGTGTGCAAACACGGAGCGGCGGTGTT
TCTCGGCGTGGTCTTGGGGGCTGCCGCCACTGCGGTGGGTGTCTTTGGGA
AGCGGAAGTAGGGAACGACCTGTACAAGGACATCGAGGGTCTCTCCAACA
CCATCGCCATTGCCAGTAAGAAGGGCATTGACAGGCACTTGCTCAAGACC
ATAGGAGATGATGACGCGGTATGGGACAGCGTGGCCCATGCCTTGGGCTC
TCTTTGCGCGACGTTGGTCCTGATGGTGTCCGTGGAGAGGATCGTCATCT
CCGGTGATGGCAGCAAACCCATTCTCTTCGACACAGACGTGAACGCCCCC
GCCCTGGCCGAGTTCACCTTCCATGCCTCCTCCCCTACGCAATCCTCAGT
GGCCTACATCACGGTCGGCACGGGGGTGGGCGTCGGGCTGGTGATCAATG
GGAAGACGGTGCATGGCCTCGTGCACCCAGAGGGCGGGCACGTCCCTCCC
TTCCGTCTGCCTTCGGACGGGATTAAAGGAATGGATAAAGGACAAGAATT
ACGACTCTGTGGGCATTGCCACCTTCGGACCTGTGGACCCTAAACTCACT
TCGCCGACATATGGCCACATCACCACCACCCCCAAGCCTGGCTGGAAGAA
CGTTGACGTCGTGGGCGCCTTGACGGGTGGCTATCGCCCAAGACAAGCCG
GACAACATCACAGAATCCATTCGCTTTGACACGACGAGCCCCGAAGAGAC
CTTTGGCAAGATCAAGATGCCGACCTATTTGGGCATCGAAGGCGGGGGCA
CCACCTGGAAGGCGTCTTGAACCGCACCATCCTCTACCCCAAAATCCGGG
CCAAGACCCTCGAGATTCTGAAAGGGTATATCGTGCACCCGCTCCTCACG
CCCGCCCTCATCGACCAGTACATCACCCCCTCCGAGTGGGGAGACAACGC
CGGCATCGTGGGGGCCTTGACGCTGGCTAAGGTCGCCCTAGACGACAAGG
GGAAAAACTCGGTGCTGGGGAAGGCACGGGCATATGTGTGCAAACACGGA
GCGGCGGTGTTTCTCGGCGTGGTCTTGGGGGCTGCCGCCACTGCGGTGGG
TGTCTTTGGGAAGCGGAAGTAGGGAACGACCTGTACAAGGACATCGAGGG
TCTCTCCAACACCATCGCCATTGCCAGTAAGAAGGGCATTGACAGGCACT
TGCTCAAGACCATAGGAGATGATGACGCGGTATGGGACAGCGTGGCCCAT
GCCTTGGGCTCTCTTTGCGCGACGTTGGTCCTGATGGTGTCCGTGGAGAG
GATCGTCATCTCCGGTGATGGCAGCAAACCCATTCTCTTCGACACAGACG
TGAACGCCCCCGCCCTGGCCGAGTTCACCTTCCATGCCTCCTCCCCTACG
CAATCCTCAGTGGCCTACATCACGGTCGGCACGGGGGTGGGCGTCGGGCT
GGTGATCAATGGGAAGACGGTGCATGGCCTCGTGCACCCAGAGGGCGGGC
ACGTCCCTCCCTTCCGTCTGCCTTCGGACGGGATTAAAGGAATGGATAAA
GGACAAGAATTACGACTCTGTGGGCATTGCCACCTTCGGACCTGTGGACC
CTAAACTCACTTCGCCGACATATGGCCACATCACCACCACCCCCAAGCCT
GGCTGGAAGAACGTTGACGTCGTGGGCGCCTTGACGGGTGGCTATCGCCC
AAGACAAGCCGGACAACATCACAGAATCCATTCGCTTTGACACGACGAGC
CCCGAAGAGACCTTTGGCAAGATCAAGATGCCGACCTATTTGGGCATCGA
AGGCGGGGGCACCACCTGGAAGGCGTCTTGAACCGCACCATCCTCTACCC
CAAAATCCGGGCCAAGACCCTCGAGATTCTGAAAGGGTATATCGTGCACC
CGCTCCTCACGCCCGCCCTCATCGACCAGTACATCACCCCCTCCGAGTGG
GGAGACAACGCCGGCATCGTGGGGGCCTTGACGCTGGCTAAGGTCGCCCT
AGACGACAAGGGGAAAAACTCGGTGCTGGGGAAGGCACGGGCATATGTGT
GCAAACACGGAGCGGCGGTGTTTCTCGGCGTGGTCTTGGGGGCTGCCGCC
ACTGCGGTGGGTGTCTTTGGGAAGCGGAAGTAGGGAACGACCTGTACAAG
GACATCGAGGGTCTCTCCAACACCATCGCCATTGCCAGTAAGAAGGGCAT
TGACAGGCACTTGCTCAAGACCATAGGAGATGATGACGCGGTATGGGACA
GCGTGGCCCATGCCTTGGGCTCTCTTTGCGCGACGTTGGTCCTGATGGTG
TCCGTGGAGAGGATCGTCATCTCCGGTGATGGCAGCAAACCCATTCTCTT
CGACACAGACGTGAACGCCCCCGCCCTGGCCGAGTTCACCTTCCATGCCT
CCTCCCCTACGCAATCCTCAGTGGCCTACATCACGGTCGGCACGGGGGTG
GGCGTCGGGCTGGTGATCAATGGGAAGACGGTGCATGGCCTCGTGCACCC
AGAGGGCGGGCACGTCCCTCCCTTCCGTCTGCCTTCGGACGGGATTAAAG
GAATGGATAAAGGACAAGAATTACGACTCTGTGGGCATTGCCACCTTCGG
ACCTGTGGACCCTAAACTCACTTCGCCGACATATGGCCACATCACCACCA
CCCCCAAGCCTGGCTGGAAGAACGTTGACGTCGTGGGCGCCTTGACGGGT
GGCTATCGCCCAAGACAAGCCGGACAACATCACAGAATCCATTCGCTTTG
ACACGACGAGCCCCGAAGAGACCTTTGGCAAGATCAAGATGCCGACCTAT
TTGGGCATCGAAGGCGGGGGCACCACCTGGAAGGCGTCTTGAACCGCACC
ATCCTCTACCCCAAAATCCGGGCCAAGACCCTCGAGATTCTGAAAGGGTA
TATCGTGCACCCGCTCCTCACGCCCGCCCTCATCGACCAGTACATCACCC
CCTCCGAGTGGGGAGACAACGCCGGCATCGTGGGGGCCTTGACGCTGGCT
AAGGTCGCCCTAGACGACAAGGGGAAAAACTCGGTGCTGGGGAAGGCACG
GGCATATGTGTGCAAACACGGAGCGGCGGTGTTTCTCGGCGTGGTCTTGG
GGGCTGCCGCCACTGCGGTGGGTGTCTTTGGGAAGCGGAAGTAGGGAACG
ACCTGTACAAGGACATCGAGGGTCTCTCCAACACCATCGCCATTGCCAGT
AAGAAGGGCATTGACAGGCACTTGCTCAAGACCATAGGAGATGATGACGC
GGTATGGGACAGCGTGGCCCATGCCTTGGGCTCTCTTTGCGCGACGTTGG
TCCTGATGGTGTCCGTGGAGAGGATCGTCATCTCCGGTGATGGCAGCAAA
CCCATTCTCTTCGACACAGACGTGAACGCCCCCGCCCTGGCCGAGTTCAC
CTTCCATGCCTCCTCCCCTACGCAATCCTCAGTGGCCTACATCACGGTCG
GCACGGGGGTGGGCGTCGGGCTGGTGATCAATGGGAAGACGGTGCATGGC
CTCGTGCACCCAGAGGGCGGGCACGTCCCTCCCTTCCGTCTGCCTTCGGA
CGGGATTAAAGGAATGGATAAAGGACAAGAATTACGACTCTGTGGGCATT
GCCACCTTCGGACCTGTGGACCCTAAACTCACTTCGCCGACATATGGCCA
CATCACCACCACCCCCAAGCCTGGCTGGAAGAACGTTGACGTCGTGGGCG
CCTTGACGGGTGGCTATCGCCCAAGACAAGCCGGACAACATCACAGAATC
CATTCGCTTTGACACGACGAGCCCCGAAGAGACCTTTGGCAAGATCAAGA
TGCCGACCTATTTGGGCATCGAAGGCGGGGGCACCACCTGGAAGGCGTCT
TGAACCGCACCATCCTCTACCCCAAAATCCGGGCCAAGACCCTCGAGATT
CTGAAAGGGTATATCGTGCACCCGCTCCTCACGCCCGCCCTCATCGACCA
GTACATCACCCCCTCCGAGTGGGGAGACAACGCCGGCATCGTGGGGGCCT
TGACGCTGGCTAAGGTCGCCCTAGACGACAAGGGGAAAAACTCGGTGCTG
GGGAAGGCACGGGCATATGTGTGCAAACACGGAGCGGCGGTGTTTCTCGG
CGTGGTCTTGGGGGCTGCCGCCACTGCGGTGGGTGTCTTTGGGAAGCGGA
AGTAGGGAACGACCTGTACAAGGACATCGAGGGTCTCTCCAACACCATCG
CCATTGCCAGTAAGAAGGGCATTGACAGGCACTTGCTCAAGACCATAGGA
GATGATGACGCGGTATGGGACAGCGTGGCCCATGCCTTGGGCTCTCTTTG
CGCGACGTTGGTCCTGATGGTGTCCGTGGAGAGGATCGTCATCTCCGGTG
ATGGCAGCAAACCCATTCTCTTCGACACAGACGTGAACGCCCCCGCCCTG
GCCGAGTTCACCTTCCATGCCTCCTCCCCTACGCAATCCTCAGTGGCCTA
CATCACGGTCGGCACGGGGGTGGGCGTCGGGCTGGTGATCAATGGGAAGA
CGGTGCATGGCCTCGTGCACCCAGAGGGCGGGCACGTCCCTCCCTTCCGT
CTGCCTTCGGACGGGATTAAAGGAATGGATAAAGGACAAGAATTACGACT
CTGTGGGCATTGCCACCTTCGGACCTGTGGACCCTAAACTCACTTCGCCG
ACATATGGCCACATCACCACCACCCCCAAGCCTGGCTGGAAGAACGTTGA
CGTCGTGGGCGCCTTGACGGGTGGCTATCGCCCAAGACAAGCCGGACAAC
ATCACAGAATCCATTCGCTTTGACACGACGAGCCCCGAAGAGACCTTTGG
CAAGATCAAGATGCCGACCTATTTGGGCATCGAAGGCGGGGGCACCACCT
GGAAGGCGTCTTGAACCGCACCATCCTCTACCCCAAAATCCGGGCCAAGA
CCCTCGAGATTCTGAAAGGGTATATCGTGCACCCGCTCCTCACGCCCGCC
CTCATCGACCAGTACATCACCCCCTCCGAGTGGGGAGACAACGCCGGCAT
CGTGGGGGCCTTGACGCTGGCTAAGGTCGCCCTAGACGACAAGGGGAAAA
ACTCGGTGCTGGGGAAGGCACGGGCATATGTGTGCAAACACGGAGCGGCG
GTGTTTCTCGGCGTGGTCTTGGGGGCTGCCGCCACTGCGGTGGGTGTCTT
TGGGAAGCGGAAGTAGGGAACGACCTGTACAAGGACATCGAGGGTCTCTC
CAACACCATCGCCATTGCCAGTAAGAAGGGCATTGACAGGCACTTGCTCA
AGACCATAGGAGATGATGACGCGGTATGGGACAGCGTGGCCCATGCCTTG
GGCTCTCTTTGCGCGACGTTGGTCCTGATGGTGTCCGTGGAGAGGATCGT
CATCTCCGGTGATGGCAGCAAACCCATTCTCTTCGACACAGACGTGAACG
CCCCCGCCCTGGCCGAGTTCACCTTCCATGCCTCCTCCCCTACGCAATCC
TCAGTGGCCTACATCACGGTCGGCACGGGGGTGGGCGTCGGGCTGGTGAT
CAATGGGAAGACGGTGCATGGCCTCGTGCACCCAGAGGGCGGGCACGTCC
CTCCCTTCCGTCTGCCTTCGGACGGGATTAAAGGAATGGATAAAGGACAA
GAATTACGACTCTGTGGGCATTGCCACCTTCGGACCTGTGGACCCTAAAC
TCACTTCGCCGACATATGGCCACATCACCACCACCCCCAAGCCTGGCTGG
AAGAACGTTGACGTCGTGGGCGCCTTGACGGGTGGCTATCGCCCAAGACA
AGCCGGACAACATCACAGAATCCATTCGCTTTGACACGACGAGCCCCGAA
GAGACCTTTGGCAAGATCAAGATGCCGACCTATTTGGGCATCGAAGGCGG
GGGCACCACCTGGAAG back to top
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