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Properties
| Property Name | Value |
|---|
| TranscriptId | 606155 |
| Track | FilteredModels2 |
| ProteinId | 606069 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_34 | supercontig | scaffold_34:46959..48171 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9464 ID=mRNA_9464|Name=jgi.p|Nanoce1779_2|606069|organism=Nannochloropsis oceanica|type=mRNA|length=951bp
GTGCTCGTGCTGGTGGTGCTGGTGGTGCTGCTGTTACTGCTGCTGCTGCC
ACTCCGAGGACGTCGCCGAGCAGCAGTTGCAGTGACACTTGCAGGACAGG
GAGGACGAAGAGGGCGAGGGCGAGGGAGGGAGGGAGGAAGGGTGGCGGAG
AGGGAGGGATCGGGACGACAAGGGGGGTCGAACACCTCCCTCCCCAGCAA
TAAAAGGCGATCAAGAAGAGGAGAGTCGATAATGACCCTTCCTCTTTTTA
TATCATCGAGGAGTGACCGTAGAGCAGCATCGTCCTCGCGCCACTGTCGA
TCATACTCGTCCTCCTCGTCCTCGTCCTCGTCCACTTCCTCGTCCTCGGC
TTCTTTTGGGCCATCATTTGGTTGGCTCCGGACTTCATATTGGAGAGAGG
AGGAGGAGGATCGTTGTGGTGATGGTGGAGGGGCCACTGGGGGTATTTGT
ATGAGCAATTTCCCCGGCTGCTCATGCCGCTCCTTTGTAACTTCTGCTGA
CGCTCCTCCTTGTACTTCTGCGCTTCCAACTCCCGCTGCTCCTGGTGCTG
CCACAGAGTCTGCGACGCGTCCACCTGGCCCCATCCCTCCTCGTCGTCGT
CCTCGTCCTCGCCCTTCCTCAAGCGAGTCGGACTCGAGCGTTGTCCCACC
TTTTGCAGCCCCTTCGGAGCCCACTCCATCCTCAGACACCGACGACTCTG
GAGATACCATGGTTTTGTGTGTAGTGCTGCTGCTCCCGTTGCCACCTGGC
GTTATCATTGAGGAACGGACCGATACTGACGCGCGATTGAAAAGGGAAGA
GACGGTGGACTTCTTCCCATCATTCCCATTGCCTTTGCTGCTGTCGCTGC
TGCTGTCGCGGCTGGTGCTTGCGTACTTCCCGTTGCTGCCGCTGCCACTC
CGGGCTAGGAAGCCTTTCATACTGCTGCTAGACGTCTGCAGGAAAAGTCT
G back to topprotein sequence of jgi.p|Nanoce1779_2|606069 >mRNA_9464-protein ID=mRNA_9464-protein|Name=jgi.p|Nanoce1779_2|606069|organism=Nannochloropsis oceanica|type=polypeptide|length=240bp
MTLPLFISSRSDRRAASSSRHCRSYSSSSSSSSSTSSSSASFGPSFGWLR
TSYWREEEEDRCGDGGGATGGICMSNFPGCSCRSFVTSADAPPCTSALPT
PAAPGAATESATRPPGPIPPRRRPRPRPSSSESDSSVVPPFAAPSEPTPS
SDTDDSGDTMVLCVVLLLPLPPGVIIEERTDTDARLKREETVDFFPSFPL
PLLLSLLLSRLVLAYFPLLPLPLRARKPFILLLDVCRKSL back to topmRNA from alignment at scaffold_34:46959..48171- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9464 ID=mRNA_9464|Name=jgi.p|Nanoce1779_2|606069|organism=Nannochloropsis oceanica|type=mRNA|length=1213bp|location=Sequence derived from alignment at scaffold_34:46959..48171- (Nannochloropsis oceanica)
GTGCTCGTGCTGGTGGTGCTGGTGGTGCTGCTGTTACTGCTGCTGCTGCC
ACTCCGAGGACGTCGCCGAGCAGCAGTTGCAGTGACACTTGCAGGACAGG
GAGGACGAAGAGGGCGAGGGCGAGGGAGGGAGGGAGGAAGGGTGGCGGAG
AGGGAGGGATCGGGACGACAAGGGGGGTCGAACACCTCCCTCCCCAGCAA
TAAAAGGCGATCAAGAAGAGGAGAGTCGATAATGACCCTTCCTCTTTTTA
TATCATCGAGGAGTGACCGTAGAGCAGCATCGTCCTCGCGCCACTGTCGA
TCATACTCGTCCTCCTCGTCCTCGTCCTCGTCCACTTCCTCGTCCTCGGC
TTCTTTTGGGCCATCATTTGGTTGGCTCCGGACTTCATATTGGAGAGAGG
AGGAGGAGGATCGTTGTGGTGATGGTGGAGGGGCCACTGGGGGTCTGTAG
GAAGGAAGGAAGGAACGAAGAGAGGAAGAGAGGAAGGAAGGACGTAAGGA
AGGACGGAAGGGGTAAGGGTAAGTGAGATTGTGGAGCATGGGATGTGGAT
AGGGAGGAACAAAGGAAGTTCCTTTACACGCCATGGTGCTGATGATCCTG
CTGGCGGTGGTGCTGTCCCTCACATACATACAGGCATAGACCCACAAAGC
AACCAGCCCATCAGTATACCCTCCGTTTCACTCCCCCACGCAACATATAC
ACGTACATTTGTATGAGCAATTTCCCCGGCTGCTCATGCCGCTCCTTTGT
AACTTCTGCTGACGCTCCTCCTTGTACTTCTGCGCTTCCAACTCCCGCTG
CTCCTGGTGCTGCCACAGAGTCTGCGACGCGTCCACCTGGCCCCATCCCT
CCTCGTCGTCGTCCTCGTCCTCGCCCTTCCTCAAGCGAGTCGGACTCGAG
CGTTGTCCCACCTTTTGCAGCCCCTTCGGAGCCCACTCCATCCTCAGACA
CCGACGACTCTGGAGATACCATGGTTTTGTGTGTAGTGCTGCTGCTCCCG
TTGCCACCTGGCGTTATCATTGAGGAACGGACCGATACTGACGCGCGATT
GAAAAGGGAAGAGACGGTGGACTTCTTCCCATCATTCCCATTGCCTTTGC
TGCTGTCGCTGCTGCTGTCGCGGCTGGTGCTTGCGTACTTCCCGTTGCTG
CCGCTGCCACTCCGGGCTAGGAAGCCTTTCATACTGCTGCTAGACGTCTG
CAGGAAAAGTCTG back to topCoding sequence (CDS) from alignment at scaffold_34:46959..48171- >mRNA_9464 ID=mRNA_9464|Name=jgi.p|Nanoce1779_2|606069|organism=Nannochloropsis oceanica|type=CDS|length=1440bp|location=Sequence derived from alignment at scaffold_34:46959..48171- (Nannochloropsis oceanica)
ATTTGTATGAGCAATTTCCCCGGCTGCTCATGCCGCTCCTTTGTAACTTC
TGCTGACGCTCCTCCTTGTACTTCTGCGCTTCCAACTCCCGCTGCTCCTG
GTGCTGCCACAGAGTCTGCGACGCGTCCACCTGGCCCCATCCCTCCTCGT
CGTCGTCCTCGTCCTCGCCCTTCCTCAAGCGAGTCGGACTCGAGCGTTGT
CCCACCTTTTGCAGCCCCTTCGGAGCCCACTCCATCCTCAGACACCGACG
ACTCTGGAGATACCATGGTTTTGTGTGTAGTGCTGCTGCTCCCGTTGCCA
CCTGGCGTTATCATTGAGGAACGGACCGATACTGACGCGCGATTGAAAAG
GGAAGAGACGGTGGACTTCTTCCCATCATTCCCATTGCCTTTGCTGCTGT
CGCTGCTGCTGTCGCGGCTGGTGCTTGCGTACTTCCCGTTGCTGCCGCTG
CCACTCCGGGCTAGGAAGCCTTTCATACTGCTGCTAGACGTCTGCAGGAA
AAGTCTGATGACCCTTCCTCTTTTTATATCATCGAGGAGTGACCGTAGAG
CAGCATCGTCCTCGCGCCACTGTCGATCATACTCGTCCTCCTCGTCCTCG
TCCTCGTCCACTTCCTCGTCCTCGGCTTCTTTTGGGCCATCATTTGGTTG
GCTCCGGACTTCATATTGGAGAGAGGAGGAGGAGGATCGTTGTGGTGATG
GTGGAGGGGCCACTGGGGGTATTTGTATGAGCAATTTCCCCGGCTGCTCA
TGCCGCTCCTTTGTAACTTCTGCTGACGCTCCTCCTTGTACTTCTGCGCT
TCCAACTCCCGCTGCTCCTGGTGCTGCCACAGAGTCTGCGACGCGTCCAC
CTGGCCCCATCCCTCCTCGTCGTCGTCCTCGTCCTCGCCCTTCCTCAAGC
GAGTCGGACTCGAGCGTTGTCCCACCTTTTGCAGCCCCTTCGGAGCCCAC
TCCATCCTCAGACACCGACGACTCTGGAGATACCATGGTTTTGTGTGTAG
TGCTGCTGCTCCCGTTGCCACCTGGCGTTATCATTGAGGAACGGACCGAT
ACTGACGCGCGATTGAAAAGGGAAGAGACGGTGGACTTCTTCCCATCATT
CCCATTGCCTTTGCTGCTGTCGCTGCTGCTGTCGCGGCTGGTGCTTGCGT
ACTTCCCGTTGCTGCCGCTGCCACTCCGGGCTAGGAAGCCTTTCATACTG
CTGCTAGACGTCTGCAGGAAAAGTCTGATGACCCTTCCTCTTTTTATATC
ATCGAGGAGTGACCGTAGAGCAGCATCGTCCTCGCGCCACTGTCGATCAT
ACTCGTCCTCCTCGTCCTCGTCCTCGTCCACTTCCTCGTCCTCGGCTTCT
TTTGGGCCATCATTTGGTTGGCTCCGGACTTCATATTGGAGAGAGGAGGA
GGAGGATCGTTGTGGTGATGGTGGAGGGGCCACTGGGGGT back to top
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