Properties
| Property Name | Value |
|---|
| TranscriptId | 272679 |
| Track | FilteredModels2 |
| ProteinId | 272593 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_35 | supercontig | scaffold_35:229977..231390 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9370 ID=mRNA_9370|Name=jgi.p|Nanoce1779_2|272593|organism=Nannochloropsis oceanica|type=mRNA|length=1414bp
GTCTTCCTAGATGCTCTACCAATTTGCCGCCGCCCGCGCTGCCCGCCGCC
CCATGCCCCTTTCCATCCGCCTGCCCGGCAAACCGCCCTCCACCCTCTAC
GGCATGAATGAGCTCTGCACGAAGCACTCTATCCTTGACGCCTACCTCTG
GCTCTCGCACAAATTTCCCTCTACCTTCGTTCAGGTGAAGTTTCTACCTC
CCTTCGTCCCTCGTTTCCTTCCTCCCTCGCTCTCGTCGTCGTTGTCGAGG
CCATTCTATCGCTAATTTCAAACTCTTTCTTTTCCTCCTTTTTTTCCTTC
TCCTTTTTTTTCCTTCCCTCCTACAGCGCGAGTCCGCCCTCCAGATGCGA
GTCAACTGCACGCGCATGCTCGAGCTCGGCCTGAAGAGCGGCATGGTGGT
ACGTCCTTCCTCGCTCGTTGGCTCCCTTTTCTTCCGATCTTCCCTTCATC
TCCCTCCTGCCCCTTGTCCTTCCCCTGACACCCTTACCGTCCCTCTTTGC
CCCCCTCCCCGCCTGCTGCAGGTGGAGCACTCCCACGACGAGCGCGATGC
CTACTTGCGGCGCCAGTTCGGCCTTAAGATGGAAAAACTCTACGGCATTC
CCTACGTGGCTCCTTCCCCTTCCCCCCCCCCTCCCTCCCTTCCGGTTTCC
ATTCGCACCGAGGAGGATACAGGCGTGGAGAATGACGACGAGGAAGAGGA
AGAGGAACGTCGGGAAGAAACAGAGGAGGACGAATCTGAACACACCCTCC
TTTTGCAAGAGCGAGGGGAGGGAGGGTCGGAAGGAGAGAAGGAGGGGGAA
AAGGAAGAAAAGATGAGAAAGGAGACTGTCTGGATCTACCCACGGCCGAG
GGCACCGGAGAAGGAGGGGAGTTTGAAAGAGGGAGGGAAGAAGGGTGTGT
TAAGCGCAGAAGAGGAAGATATTCTCAAGGGGCTTTTCGATTTTCGGCTG
GCGAGATTTCGGAGAGAGGTTCAGATGAGGAATCGGCTGGGAAAGGGGGC
AGGGAAGGAGGTAAGGGGGGGAAGTGAGCTAGGTAGGATCGGTGTGTGGG
GGGGAGGGAAGGGGCGGGGGAGGAGTGAGGGAAAGGGGGAGAAGGGGGAG
GAAGGGGAGGTAAGGCGAAGGGAGGCGGCAGGAGTTGGGAAGGCACGGGG
GAGGGGAGAAGGGGGAGGAGAGCGGAGGGGCCCGAAGCGAGTTTCGTCTG
CGAGTTAAGCAATGCATGAGGATGAGACGAAGGGAGGGAGGAGGAGAAGA
AGGGAGGGAGGAGGGGAAGAAGATAGGAAACAGAAGCGATTCAAAGAAAG
GTGATGGAGTCGATCTAGTTACAAAAGGGGAAATCGAAGCAAGTAAAAGA
ACGACACGGGTCGACCGAATGTCAAGTAAGAAATCAGACCATAAACTGGG
TAAGTAGCTTATAA back to topprotein sequence of jgi.p|Nanoce1779_2|272593 >mRNA_9370-protein ID=mRNA_9370-protein|Name=jgi.p|Nanoce1779_2|272593|organism=Nannochloropsis oceanica|type=polypeptide|length=288bp
MRVNCTRMLELGLKSGMVVRPSSLVGSLFFRSSLHLPPAPCPSPDTLTVP
LCPPPRLLQVEHSHDERDAYLRRQFGLKMEKLYGIPYVAPSPSPPPPSLP
VSIRTEEDTGVENDDEEEEEERREETEEDESEHTLLLQERGEGGSEGEKE
GEKEEKMRKETVWIYPRPRAPEKEGSLKEGGKKGVLSAEEEDILKGLFDF
RLARFRREVQMRNRLGKGAGKEVRGGSELGRIGVWGGGKGRGRSEGKGEK
GEEGEVRRREAAGVGKARGRGEGGGERRGPKRVSSAS* back to topmRNA from alignment at scaffold_35:229977..231390- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9370 ID=mRNA_9370|Name=jgi.p|Nanoce1779_2|272593|organism=Nannochloropsis oceanica|type=mRNA|length=1414bp|location=Sequence derived from alignment at scaffold_35:229977..231390- (Nannochloropsis oceanica)
GTCTTCCTAGATGCTCTACCAATTTGCCGCCGCCCGCGCTGCCCGCCGCC
CCATGCCCCTTTCCATCCGCCTGCCCGGCAAACCGCCCTCCACCCTCTAC
GGCATGAATGAGCTCTGCACGAAGCACTCTATCCTTGACGCCTACCTCTG
GCTCTCGCACAAATTTCCCTCTACCTTCGTTCAGGTGAAGTTTCTACCTC
CCTTCGTCCCTCGTTTCCTTCCTCCCTCGCTCTCGTCGTCGTTGTCGAGG
CCATTCTATCGCTAATTTCAAACTCTTTCTTTTCCTCCTTTTTTTCCTTC
TCCTTTTTTTTCCTTCCCTCCTACAGCGCGAGTCCGCCCTCCAGATGCGA
GTCAACTGCACGCGCATGCTCGAGCTCGGCCTGAAGAGCGGCATGGTGGT
ACGTCCTTCCTCGCTCGTTGGCTCCCTTTTCTTCCGATCTTCCCTTCATC
TCCCTCCTGCCCCTTGTCCTTCCCCTGACACCCTTACCGTCCCTCTTTGC
CCCCCTCCCCGCCTGCTGCAGGTGGAGCACTCCCACGACGAGCGCGATGC
CTACTTGCGGCGCCAGTTCGGCCTTAAGATGGAAAAACTCTACGGCATTC
CCTACGTGGCTCCTTCCCCTTCCCCCCCCCCTCCCTCCCTTCCGGTTTCC
ATTCGCACCGAGGAGGATACAGGCGTGGAGAATGACGACGAGGAAGAGGA
AGAGGAACGTCGGGAAGAAACAGAGGAGGACGAATCTGAACACACCCTCC
TTTTGCAAGAGCGAGGGGAGGGAGGGTCGGAAGGAGAGAAGGAGGGGGAA
AAGGAAGAAAAGATGAGAAAGGAGACTGTCTGGATCTACCCACGGCCGAG
GGCACCGGAGAAGGAGGGGAGTTTGAAAGAGGGAGGGAAGAAGGGTGTGT
TAAGCGCAGAAGAGGAAGATATTCTCAAGGGGCTTTTCGATTTTCGGCTG
GCGAGATTTCGGAGAGAGGTTCAGATGAGGAATCGGCTGGGAAAGGGGGC
AGGGAAGGAGGTAAGGGGGGGAAGTGAGCTAGGTAGGATCGGTGTGTGGG
GGGGAGGGAAGGGGCGGGGGAGGAGTGAGGGAAAGGGGGAGAAGGGGGAG
GAAGGGGAGGTAAGGCGAAGGGAGGCGGCAGGAGTTGGGAAGGCACGGGG
GAGGGGAGAAGGGGGAGGAGAGCGGAGGGGCCCGAAGCGAGTTTCGTCTG
CGAGTTAAGCAATGCATGAGGATGAGACGAAGGGAGGGAGGAGGAGAAGA
AGGGAGGGAGGAGGGGAAGAAGATAGGAAACAGAAGCGATTCAAAGAAAG
GTGATGGAGTCGATCTAGTTACAAAAGGGGAAATCGAAGCAAGTAAAAGA
ACGACACGGGTCGACCGAATGTCAAGTAAGAAATCAGACCATAAACTGGG
TAAGTAGCTTATAA back to topCoding sequence (CDS) from alignment at scaffold_35:229977..231390- >mRNA_9370 ID=mRNA_9370|Name=jgi.p|Nanoce1779_2|272593|organism=Nannochloropsis oceanica|type=CDS|length=864bp|location=Sequence derived from alignment at scaffold_35:229977..231390- (Nannochloropsis oceanica)
ATGCGAGTCAACTGCACGCGCATGCTCGAGCTCGGCCTGAAGAGCGGCAT
GGTGGTACGTCCTTCCTCGCTCGTTGGCTCCCTTTTCTTCCGATCTTCCC
TTCATCTCCCTCCTGCCCCTTGTCCTTCCCCTGACACCCTTACCGTCCCT
CTTTGCCCCCCTCCCCGCCTGCTGCAGGTGGAGCACTCCCACGACGAGCG
CGATGCCTACTTGCGGCGCCAGTTCGGCCTTAAGATGGAAAAACTCTACG
GCATTCCCTACGTGGCTCCTTCCCCTTCCCCCCCCCCTCCCTCCCTTCCG
GTTTCCATTCGCACCGAGGAGGATACAGGCGTGGAGAATGACGACGAGGA
AGAGGAAGAGGAACGTCGGGAAGAAACAGAGGAGGACGAATCTGAACACA
CCCTCCTTTTGCAAGAGCGAGGGGAGGGAGGGTCGGAAGGAGAGAAGGAG
GGGGAAAAGGAAGAAAAGATGAGAAAGGAGACTGTCTGGATCTACCCACG
GCCGAGGGCACCGGAGAAGGAGGGGAGTTTGAAAGAGGGAGGGAAGAAGG
GTGTGTTAAGCGCAGAAGAGGAAGATATTCTCAAGGGGCTTTTCGATTTT
CGGCTGGCGAGATTTCGGAGAGAGGTTCAGATGAGGAATCGGCTGGGAAA
GGGGGCAGGGAAGGAGGTAAGGGGGGGAAGTGAGCTAGGTAGGATCGGTG
TGTGGGGGGGAGGGAAGGGGCGGGGGAGGAGTGAGGGAAAGGGGGAGAAG
GGGGAGGAAGGGGAGGTAAGGCGAAGGGAGGCGGCAGGAGTTGGGAAGGC
ACGGGGGAGGGGAGAAGGGGGAGGAGAGCGGAGGGGCCCGAAGCGAGTTT
CGTCTGCGAGTTAA back to top
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