Properties
Property Name | Value |
TranscriptId | 272552 |
Track | FilteredModels2 |
ProteinId | 272466 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_35 | supercontig | scaffold_35:216043..217523 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9364 ID=mRNA_9364|Name=jgi.p|Nanoce1779_2|272466|organism=Nannochloropsis oceanica|type=mRNA|length=1110bp ACAGAAGTCGGTCAGAGGGTGCTCGAAAAGGAGGAGAAAGAGGAGGACGA CGAGGATGAGGACGAGGACGAGGAAGAGGACATCCGGGATATGTCCCTGG GCAGCCACGCCTCTTCTCTCTGCGACGCAGCTGCGGCTGCAGCTGCAGCT GCTGTTGCCGAGAGCCATCACGACCCGCACACTACCCTCGAGGAGGAAGG GAGCGAGGAGGAGGAGAGCGAAGAAGAGGGGGACGAGGAAGAGGAGGTAG TACGTCACCGCGTTCCTCGCCGCTCTCCGCTTCCTCCTTCTCTCCCTCCC TCCCGCCGACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACA ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC AGGGGGCTCCCGCTCCTTCCCCTTCCCGTCCTTTTGTCTCCCGTCTGACC CCTCGCCAGCAGCAGCAGCGACCTTCATCCCCTTCCTCCTTCCAACCCTC TCCTTCCTCCTCTACCATCGCTACCGCCGCCGCTGGTGCCGCTGGTGCCA GCAGCATCAGCAGCAGCAACAGTAGCAGCAGCAAGGCTTCGCGGAGGGAG GGAGGGAGGGAGGGCAGAAGGCCGTCAACGACCGCCTCGCCGACCCCCCC CCTCTGCTCTCAAGGGACAAGCGCTCTTCCAGTCCCCCTTGGCGCCACTC CTCCCAGGACGCGAGAACTACTCGCCTTCCTCCATGCACAAGACCCCGCC GCCTCCCCCCCTCCCTGCCCCTACCCCTCCCTCCGTCCTCTCCTCGCGCC TCTCCTCTCATCCCTCATCCTCCACCACCACCACCCGCGGCATCCTGCGT CCCCGGGACCCCAACATTCTGCTCCCTTCAGCTTCTCGGGCTCAGGCTGG GCGGACCACGCCGGCCATTCAAAGTCCCTTCCTCGAAGCCTACAAAGTCC GGCGGCAACGGCAACAGCAGGAGCAACAGCCACCGCCCTCTCCCTCCCTC CCTCCCTCCTACCAGCCCTACCTCCGCACCTCCCACGGTAGCAGCAGCGG CATCGGCGGCGTCAGTTGTAGCACAGGCAAGGACCGATGATGGGGAGGGA AGGAGGATGG back to topprotein sequence of jgi.p|Nanoce1779_2|272466 >mRNA_9364-protein ID=mRNA_9364-protein|Name=jgi.p|Nanoce1779_2|272466|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp MSLGSHASSLCDAAAAAAAAAVAESHHDPHTTLEEEGSEEEESEEEGDEE EEVVRHRVPRRSPLPPSLPPSRRQQQQQQQQQQQQQQQQQQQQQQQQQQQ QQQQGAPAPSPSRPFVSRLTPRQQQQRPSSPSSFQPSPSSSTIATAAAGA AGASSISSSNSSSSKASRREGGREGRRPSTTASPTPPLCSQGTSALPVPL GATPPRTRELLAFLHAQDPAASPPPCPYPSLRPLLAPLLSSLILHHHHPR HPASPGPQHSAPFSFSGSGWADHAGHSKSLPRSLQSPAATATAGATATAL SLPPSLLPALPPHLPR* back to topmRNA from alignment at scaffold_35:216043..217523+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9364 ID=mRNA_9364|Name=jgi.p|Nanoce1779_2|272466|organism=Nannochloropsis oceanica|type=mRNA|length=1481bp|location=Sequence derived from alignment at scaffold_35:216043..217523+ (Nannochloropsis oceanica) ACAGAAGTCGGTCAGAGGGTGCTCGAAAAGGAGGAGAAAGAGGAGGACGA
CGAGGATGAGGACGAGGACGAGGAAGAGGACATCCGGGTGAGTTTCTGTC
TTGTACTTAATCTCGCTCTTGACTGCATCCCTCCACTCACCTCACCCTCC
CTCTCTTCTTTCCTCCCTCCCTCCCTCCCTCTAAAGGATATGTCCCTGGG
CAGCCACGCCTCTTCTCTCTGCGACGCAGCTGCGGCTGCAGCTGCAGCTG
CTGTTGCCGAGAGCCATCACGACCCGCACACTACCCTCGAGGAGGAAGGG
AGCGAGGAGGAGGAGAGCGAAGAAGAGGGGGACGAGGAAGAGGAGGTAGT
ACGTCACCGCGTTCCTCGCCGCTCTCCGCTTCCTCCTTCTCTCCCTCCCT
CCCGCCGACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
GGGGGCTCCCGCTCCTTCCCCTTCCCGTCCTTTTGTCTCCCGTCTGACCC
CTCGCCAGCAGCAGCAGCGACCTTCATCCCCTTCCTCCTTCCAACCCTCT
CCTTCCTCCTCTACCATCGCTACCGCCGCCGCTGGTGCCGCTGGTGCCAG
CAGCATCAGCAGCAGCAACAGTAGCAGCAGCAAGGCTTCGCGGAGGGAGG
GAGGGAGGGAGGGCAGAAGGCCGTCAACGACCGCCTCGCCGACCCCCCCC
CTCTGCTCTCAAGGGACAAGCGCTCTTCCAGTCCCCCTTGGCGCCACTCC
TCCCAGGACGCGAGGTGAGGAAAGAGAATGCGAGGGAAGGAGGCCGAAAC
AGCTGAAGCAACGCACACAAATTACTCTATCGCACCTTGCTCTGCCCTTC
TTACTCACATGTCACCCCTCTGCTCCCTCCCTTTCGATTTTCCCCCACAG
AACTACTCGCCTTCCTCCATGCACAAGACCCCGCCGCCTCCCCCCCTCCC
TGCCCCTACCCCTCCCTCCGTCCTCTCCTCGCGCCTCTCCTCTCATCCCT
CATCCTCCACCACCACCACCCGCGGCATCCTGCGTCCCCGGGACCCCAAC
ATTCTGCTCCCTTCAGCTTCTCGGGCTCAGGCTGGGCGGACCACGCCGGC
CATTCAAAGGTAGGAAAGGAAGGAAAGAAAGGAGGAAGGGAAGGAGAGGG
CTTAAGGGGGAAATAAGTGTGTAACTATCTGGTCTCTGTAACTATCTGAT
ATCTCATACCACTCCCGTTCCCCCCACCCTCCATCCCTCCCTCAGTCCCT
TCCTCGAAGCCTACAAAGTCCGGCGGCAACGGCAACAGCAGGAGCAACAG
CCACCGCCCTCTCCCTCCCTCCCTCCCTCCTACCAGCCCTACCTCCGCAC
CTCCCACGGTAGCAGCAGCGGCATCGGCGGCGTCAGTTGTAGCACAGGCA
AGGACCGATGATGGGGAGGGAAGGAGGATGG back to topCoding sequence (CDS) from alignment at scaffold_35:216043..217523+ >mRNA_9364 ID=mRNA_9364|Name=jgi.p|Nanoce1779_2|272466|organism=Nannochloropsis oceanica|type=CDS|length=2853bp|location=Sequence derived from alignment at scaffold_35:216043..217523+ (Nannochloropsis oceanica) ATGTCCCTGGGCAGCCACGCCTCTTCTCTCTGCGACGCAGCTGCGGCTGC AGCTGCAGCTGCTGTTGCCGAGAGCCATCACGACCCGCACACTACCCTCG AGGAGGAAGGGAGCGAGGAGGAGGAGAGCGAAGAAGAGGGGGACGAGGAA GAGGAGGTAGTACGTCACCGCGTTCCTCGCCGCTCTCCGCTTCCTCCTTC TCTCCCTCCCTCCCGCCGACAACAGCAGCAGCAGCAGCAGCAGCAGCAAC AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA CAACAACAACAGGGGGCTCCCGCTCCTTCCCCTTCCCGTCCTTTTGTCTC CCGTCTGACCCCTCGCCAGCAGCAGCAGCGACCTTCATCCCCTTCCTCCT TCCAACCCTCTCCTTCCTCCTCTACCATCGCTACCGCCGCCGCTGGTGCC GCTGGTGCCAGCAGCATCAGCAGCAGCAACAGTAGCAGCAGCAAGGCTTC GCGGAGGGAGGGAGGGAGGGAGGGCAGAAGGCCGTCAACGACCGCCTCGC CGACCCCCCCCCTCTGCTCTCAAGGGACAAGCGCTCTTCCAGTCCCCCTT GGCGCCACTCCTCCCAGGACGCGAGAACTACTCGCCTTCCTCCATGCACA AGACCCCGCCGCCTCCCCCCCTCCCTGCCCCTACCCCTCCCTCCGTCCTC TCCTCGCGCCTCTCCTCTCATCCCTCATCCTCCACCACCACCACCCGCGG CATCCTGCGTCCCCGGGACCCCAACATTCTGCTCCCTTCAGCTTCTCGGG CTCAGGCTGGGCGGACCACGCCGGCCATTCAAAGTCCCTTCCTCGAAGCC TACAAAGTCCGGCGGCAACGGCAACAGCAGGAGCAACAGCCACCGCCCTC TCCCTCCCTCCCTCCCTCCTACCAGCCCTACCTCCGCACCTCCCACGGTA GATGTCCCTGGGCAGCCACGCCTCTTCTCTCTGCGACGCAGCTGCGGCTG CAGCTGCAGCTGCTGTTGCCGAGAGCCATCACGACCCGCACACTACCCTC GAGGAGGAAGGGAGCGAGGAGGAGGAGAGCGAAGAAGAGGGGGACGAGGA AGAGGAGGTAGTACGTCACCGCGTTCCTCGCCGCTCTCCGCTTCCTCCTT CTCTCCCTCCCTCCCGCCGACAACAGCAGCAGCAGCAGCAGCAGCAGCAA CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA ACAACAACAACAGGGGGCTCCCGCTCCTTCCCCTTCCCGTCCTTTTGTCT CCCGTCTGACCCCTCGCCAGCAGCAGCAGCGACCTTCATCCCCTTCCTCC TTCCAACCCTCTCCTTCCTCCTCTACCATCGCTACCGCCGCCGCTGGTGC CGCTGGTGCCAGCAGCATCAGCAGCAGCAACAGTAGCAGCAGCAAGGCTT CGCGGAGGGAGGGAGGGAGGGAGGGCAGAAGGCCGTCAACGACCGCCTCG CCGACCCCCCCCCTCTGCTCTCAAGGGACAAGCGCTCTTCCAGTCCCCCT TGGCGCCACTCCTCCCAGGACGCGAGAACTACTCGCCTTCCTCCATGCAC AAGACCCCGCCGCCTCCCCCCCTCCCTGCCCCTACCCCTCCCTCCGTCCT CTCCTCGCGCCTCTCCTCTCATCCCTCATCCTCCACCACCACCACCCGCG GCATCCTGCGTCCCCGGGACCCCAACATTCTGCTCCCTTCAGCTTCTCGG GCTCAGGCTGGGCGGACCACGCCGGCCATTCAAAGTCCCTTCCTCGAAGC CTACAAAGTCCGGCGGCAACGGCAACAGCAGGAGCAACAGCCACCGCCCT CTCCCTCCCTCCCTCCCTCCTACCAGCCCTACCTCCGCACCTCCCACGGT AGATGTCCCTGGGCAGCCACGCCTCTTCTCTCTGCGACGCAGCTGCGGCT GCAGCTGCAGCTGCTGTTGCCGAGAGCCATCACGACCCGCACACTACCCT CGAGGAGGAAGGGAGCGAGGAGGAGGAGAGCGAAGAAGAGGGGGACGAGG AAGAGGAGGTAGTACGTCACCGCGTTCCTCGCCGCTCTCCGCTTCCTCCT TCTCTCCCTCCCTCCCGCCGACAACAGCAGCAGCAGCAGCAGCAGCAGCA ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC AACAACAACAACAGGGGGCTCCCGCTCCTTCCCCTTCCCGTCCTTTTGTC TCCCGTCTGACCCCTCGCCAGCAGCAGCAGCGACCTTCATCCCCTTCCTC CTTCCAACCCTCTCCTTCCTCCTCTACCATCGCTACCGCCGCCGCTGGTG CCGCTGGTGCCAGCAGCATCAGCAGCAGCAACAGTAGCAGCAGCAAGGCT TCGCGGAGGGAGGGAGGGAGGGAGGGCAGAAGGCCGTCAACGACCGCCTC GCCGACCCCCCCCCTCTGCTCTCAAGGGACAAGCGCTCTTCCAGTCCCCC TTGGCGCCACTCCTCCCAGGACGCGAGAACTACTCGCCTTCCTCCATGCA CAAGACCCCGCCGCCTCCCCCCCTCCCTGCCCCTACCCCTCCCTCCGTCC TCTCCTCGCGCCTCTCCTCTCATCCCTCATCCTCCACCACCACCACCCGC GGCATCCTGCGTCCCCGGGACCCCAACATTCTGCTCCCTTCAGCTTCTCG GGCTCAGGCTGGGCGGACCACGCCGGCCATTCAAAGTCCCTTCCTCGAAG CCTACAAAGTCCGGCGGCAACGGCAACAGCAGGAGCAACAGCCACCGCCC TCTCCCTCCCTCCCTCCCTCCTACCAGCCCTACCTCCGCACCTCCCACGG TAG back to top
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