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Properties
| Property Name | Value |
|---|
| TranscriptId | 606637 |
| Track | FilteredModels2 |
| ProteinId | 606551 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_35 | supercontig | scaffold_35:205372..206788 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9360 ID=mRNA_9360|Name=jgi.p|Nanoce1779_2|606551|organism=Nannochloropsis oceanica|type=mRNA|length=1022bp
TGTCTCGCCTGCTGCGCTTACGGCTGTCTCCATTACGACCGGAGGAGGTA
GCCTTCTGCAGCTAAAGCAAAGTGCCCCTCCGTCCATCCCTTCCTCCCTC
CCGCCCTGTTCCTCGTCCTACCTCGTCTTCCTATTCCACCTCTTCCACCT
TTATCGCTTGCCGCCTGTGCTGCTGCGTCTGCTCTGCCACGGAGGAATCC
GCAAGGTGGGAGTGAATATCCTGCACGACATGCACAAGCTGGGCCGGGAC
TGGGGCGAGGAGATCCAGAGGGAGGGTGGCCTCAGGGGATTCGTGGAGCT
TTCCGATCTCGCCAACCACCTCTCTTTCCAGACCTCCGTCCTTCCCTCCC
TCGCCCCCACCAGCAGCAGTGGCAAGTGGAGCTTGGAACATCTGTGTATC
GTTTTCCTCCAACGACAATTGTACAAGCCCGAACGCATTCGAAAAGGAGA
GTGGGAGAAACGCCCGCTGGCACACGAGAAGATGGCCTACGCGGCCAACG
ACGTCTATGCTACTCTCCGCGTCTATCAAGCTCTCCTTCCGTCCCTCCTG
CTGTCCCTCCTTCCGTCCCTCCTTCCCTCCGTGGCTACTCTCACCTACCT
GGCTCCTTCCCCCTCCACCTCCTCCTCCGCCTGCCCTCTCCCTCCTTCCC
TCCCCTCCAAACAAACACAAAACCCCCCATTTAAATTCCCAGAAGTAACG
GCTGCGGCAGGCAGGGAAAAGGGAAATCCAAGCCAAGCTAAATTTAATTA
ACAAAGTCAGGCTTAATCTGATAAAAATGATCACAATCAAGCTTTCTTCT
TCCGAGATCAAAGAGAATTGCGAAAGCGATGTTCGATTATTATTATGGCG
CGCATGCCCAATAGGCGCACTGTGGACAATTAGAGAACCAATCAAACGCC
CATTAGGGTGATCAAAGGTACATTAACGAAATCAAACAACATAAGAGTAC
GACAACACCCATTAGGATTGTCAAACCAAGCAACCACTGTAGATTTAAAA
AGGAAGCGACAAAAGTGTAAAT back to topprotein sequence of jgi.p|Nanoce1779_2|606551 >mRNA_9360-protein ID=mRNA_9360-protein|Name=jgi.p|Nanoce1779_2|606551|organism=Nannochloropsis oceanica|type=polypeptide|length=174bp
MHKLGRDWGEEIQREGGLRGFVELSDLANHLSFQTSVLPSLAPTSSSGKW
SLEHLCIVFLQRQLYKPERIRKGEWEKRPLAHEKMAYAANDVYATLRVYQ
ALLPSLLLSLLPSLLPSVATLTYLAPSPSTSSSACPLPPSLPSKQTQNPP
FKFPEVTAAAGREKGNPSQAKFN* back to topmRNA from alignment at scaffold_35:205372..206788+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9360 ID=mRNA_9360|Name=jgi.p|Nanoce1779_2|606551|organism=Nannochloropsis oceanica|type=mRNA|length=1417bp|location=Sequence derived from alignment at scaffold_35:205372..206788+ (Nannochloropsis oceanica)
TGTCTCGCCTGCTGCGCTTACGGCTGTCTCCATTACGACCGGAGGAGGTA
GCCTTCTGCAGCTAAAGCAAAGTGCCCCTCCGTCCATCCCTTCCTCCCTC
CCGCCCTGTTCCTCGTCCTACCTCGTCTTCCTATTCCACCTCTTCCACCT
TTATCGCTTGCCGCCTGTGCTGCTGCGTCTGCTCTGCCACGGAGGAATCC
GCAAGGTTCAAAGGAAGCTCGGATAGGAGGGAGGGAGGTTGAAACTCCTC
ATTTTCTCTCCGCTGGACATGTATATTCCATCAGCTACCTCATGTTGATG
CGTCACCACTCAACCCCTCCACCCTTCCCCACATCCCTCCCTGCCCCCCC
TTTGTAGGTGGGAGTGAATATCCTGCACGACATGCACAAGCTGGGCCGGG
ACTGGGGCGAGGAGATCCAGAGGGAGGGTGGCCTCAGGGGATTCGTGGAG
GTAAGGGAGGGAAGGAGGGAGAGAGGAATGAACGGAGGGTCAGGATGACG
GGTGTATGTGAACCTGCAGTAGCCGCCTCTTGTCTTCACCCTTGCTTTTT
TCACATGTTACCTTCTCCCTTCCTCCCCCCTCTCCCTCCTCGACCCCACA
AGCTTTCCGATCTCGCCAACCACCTCTCTTTCCAGACCTCCGTCCTTCCC
TCCCTCGCCCCCACCAGCAGCAGTGGCAAGTGGAGCTTGGAACATCTGTG
TATCGTTTTCCTCCAACGACAATTGTACAAGCCCGAACGCATTCGAAAAG
GAGAGTGGGAGAAACGCCCGCTGGCACACGAGAAGATGTAAATCCTTGCT
CTCCCTCCCTCCCTCCCTCCCTCCCTCCAGTTGATCTCACATTCATCTAA
TGTCTCCCTGCTTCACTTCCTCCCCCAGGGCCTACGCGGCCAACGACGTC
TATGCTACTCTCCGCGTCTATCAAGCTCTCCTTCCGTCCCTCCTGCTGTC
CCTCCTTCCGTCCCTCCTTCCCTCCGTGGCTACTCTCACCTACCTGGCTC
CTTCCCCCTCCACCTCCTCCTCCGCCTGCCCTCTCCCTCCTTCCCTCCCC
TCCAAACAAACACAAAACCCCCCATTTAAATTCCCAGAAGTAACGGCTGC
GGCAGGCAGGGAAAAGGGAAATCCAAGCCAAGCTAAATTTAATTAACAAA
GTCAGGCTTAATCTGATAAAAATGATCACAATCAAGCTTTCTTCTTCCGA
GATCAAAGAGAATTGCGAAAGCGATGTTCGATTATTATTATGGCGCGCAT
GCCCAATAGGCGCACTGTGGACAATTAGAGAACCAATCAAACGCCCATTA
GGGTGATCAAAGGTACATTAACGAAATCAAACAACATAAGAGTACGACAA
CACCCATTAGGATTGTCAAACCAAGCAACCACTGTAGATTTAAAAAGGAA
GCGACAAAAGTGTAAAT back to topCoding sequence (CDS) from alignment at scaffold_35:205372..206788+ >mRNA_9360 ID=mRNA_9360|Name=jgi.p|Nanoce1779_2|606551|organism=Nannochloropsis oceanica|type=CDS|length=1566bp|location=Sequence derived from alignment at scaffold_35:205372..206788+ (Nannochloropsis oceanica)
ATGCACAAGCTGGGCCGGGACTGGGGCGAGGAGATCCAGAGGGAGGGTGG
CCTCAGGGGATTCGTGGAGCTTTCCGATCTCGCCAACCACCTCTCTTTCC
AGACCTCCGTCCTTCCCTCCCTCGCCCCCACCAGCAGCAGTGGCAAGTGG
AGCTTGGAACATCTGTGTATCGTTTTCCTCCAACGACAATTGTACAAGCC
CGAACGCATTCGAAAAGGAGAGTGGGAGAAACGCCCGCTGGCACACGAGA
AGATGGCCTACGCGGCCAACGACGTCTATGCTACTCTCCGCGTCTATCAA
GCTCTCCTTCCGTCCCTCCTGCTGTCCCTCCTTCCGTCCCTCCTTCCCTC
CGTGGCTACTCTCACCTACCTGGCTCCTTCCCCCTCCACCTCCTCCTCCG
CCTGCCCTCTCCCTCCTTCCCTCCCCTCCAAACAAACACAAAACCCCCCA
TTTAAATTCCCAGAAGTAACGGCTGCGGCAGGCAGGGAAAAGGGAAATCC
AAGCCAAGCTAAATTTAATTAAATGCACAAGCTGGGCCGGGACTGGGGCG
AGGAGATCCAGAGGGAGGGTGGCCTCAGGGGATTCGTGGAGCTTTCCGAT
CTCGCCAACCACCTCTCTTTCCAGACCTCCGTCCTTCCCTCCCTCGCCCC
CACCAGCAGCAGTGGCAAGTGGAGCTTGGAACATCTGTGTATCGTTTTCC
TCCAACGACAATTGTACAAGCCCGAACGCATTCGAAAAGGAGAGTGGGAG
AAACGCCCGCTGGCACACGAGAAGATGGCCTACGCGGCCAACGACGTCTA
TGCTACTCTCCGCGTCTATCAAGCTCTCCTTCCGTCCCTCCTGCTGTCCC
TCCTTCCGTCCCTCCTTCCCTCCGTGGCTACTCTCACCTACCTGGCTCCT
TCCCCCTCCACCTCCTCCTCCGCCTGCCCTCTCCCTCCTTCCCTCCCCTC
CAAACAAACACAAAACCCCCCATTTAAATTCCCAGAAGTAACGGCTGCGG
CAGGCAGGGAAAAGGGAAATCCAAGCCAAGCTAAATTTAATTAAATGCAC
AAGCTGGGCCGGGACTGGGGCGAGGAGATCCAGAGGGAGGGTGGCCTCAG
GGGATTCGTGGAGCTTTCCGATCTCGCCAACCACCTCTCTTTCCAGACCT
CCGTCCTTCCCTCCCTCGCCCCCACCAGCAGCAGTGGCAAGTGGAGCTTG
GAACATCTGTGTATCGTTTTCCTCCAACGACAATTGTACAAGCCCGAACG
CATTCGAAAAGGAGAGTGGGAGAAACGCCCGCTGGCACACGAGAAGATGG
CCTACGCGGCCAACGACGTCTATGCTACTCTCCGCGTCTATCAAGCTCTC
CTTCCGTCCCTCCTGCTGTCCCTCCTTCCGTCCCTCCTTCCCTCCGTGGC
TACTCTCACCTACCTGGCTCCTTCCCCCTCCACCTCCTCCTCCGCCTGCC
CTCTCCCTCCTTCCCTCCCCTCCAAACAAACACAAAACCCCCCATTTAAA
TTCCCAGAAGTAACGGCTGCGGCAGGCAGGGAAAAGGGAAATCCAAGCCA
AGCTAAATTTAATTAA back to top
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