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Properties
| Property Name | Value |
|---|
| TranscriptId | 606623 |
| Track | FilteredModels2 |
| ProteinId | 606537 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_35 | supercontig | scaffold_35:199904..202724 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9358 ID=mRNA_9358|Name=jgi.p|Nanoce1779_2|606537|organism=Nannochloropsis oceanica|type=mRNA|length=1623bp
CGACACGCCGACCTCCCTCCCGTCTCACAAGGAGACCGAGCAAGAGGCCA
GCGGACACTTTCTCCCTCCCTCCCTCCCTGAGCGCACATTATAAATATAT
AGACGTATGTACGTAATTGTATCGAAATTTATTTATCACATAAAGAAGCG
CAGGACAAGAGATTCTGAAACGGAAAGAGGCAGAGGAGGAAAAGGGAGAG
CACGCGTTGATGCGCCTACTAGAGACGCAATCCTCCGTCCCTCCCTCCAT
CCTTCCCGCTGTCATGGTCCATAGCTCCTCTTCTCTCCGTCCCTCCCTCC
CTCCGTCCGGTCGCCTTTCCATCGTAATCGTACTGTTTGAGTAGTGAGTG
ACACGTCACAATTAGCCAGCCCTCCGCCTCATCCTCCCTCCCCCCGTCCG
AGCACCCTCCATCCACGAACGTACAAATCAAAACATTAGGAAATGATGGT
ACATGGTCTTGTCTTTCCCTCCCTCCCTTCCTGCTTGCCCTCATAAAATA
CACAGGAGTGGGTGCCGTCCATCGGCACGCTCCATCACAGAGCCATCTCT
CCCTCCATCTCTTCCCATTCTCGTGGCCCTCGTTCACGAGTTTAGAATCG
GAAGCGGCGGTTGGCGGCGTAATTCTTTACAAATTCGTCCATCTCTTCGG
GGGAGTTCGCGCGGAGGGCCATGGACGTGACTGGATCAGAGTCGATGAGG
CGCATGACCTCCTTGTTGTCGAGAAGGGACTTGAGGGGGTTGCCTTCGGA
CACGGCCTTGAGCGCGCTGGTGTTAATGCCGGGGAAGAGCTTCTCGTTGA
CCGCAGCCTCGACCTTGGCCATGGCCTCCTTGTCGCCCGAGGAGGCGTCG
TTGAAGACCTCCTGTGAGGAGAAAAAGCAGGAATGGCAGAGGATAAAAAA
GAGAGATGAACACACACATAAAAGGGTGGCGTCCATACATTTACAAGGGA
CTGGTGGTATCCAGCTCCTACGGAAAAGACCAAAGAGTCCAAAACATCAA
GAAATCAACATCTTCTCTCGCAAAGGGGAGAGGCAGCCACGGCCAGTAGA
ACTAGAAATCTCTCAAGATTCGTGTCACCCCTTCCTCCCTCCCTCCCTCC
ATACACTGAAGCCGTCGGCGTCGTCGGCCAGCAACTCGGACAAGACGCGG
GTGGAGATGGTGGGGTCCTTCATGGTCTTGAGCATGTCAGGCAAGGCAGT
CATCATCGCATTGATGCCAGCGGCAAAGCCCGCCTTGGTCCCTTCGGCAT
CAAGGCGGCGGCCGGTGATCTGCTTGAAACCGTCGAAGGCCGCGAGGAGG
GGCAGCTTCTCCATGATCGTGTGCTGGATCTCGGCGTTGTCGAGGACGGC
CTTCATCCCCTCCGACTGGAAGTTGCTCGTGAACACGGACATGACATCCA
GGCCGTTGCGCCAGGCGTCCTGCATCATGGTGAGCTCGGCGTCGGGCTTG
TAGGCGGGGAGCATGTCCTTCAGGGCACCGGTGGTCATTTGCTGCCTGCG
GCGCATGGGGCTCTCGGCAGTGGCGAGGCCAGCAAAGGCGAATATGGCCA
GAGCGACCGCGGAACGAAACAGACGAGCCATTGTATATGTAGCTTGTGGA
TGATGGGTAGCGTGTCTTGCTGT back to topprotein sequence of jgi.p|Nanoce1779_2|606537 >mRNA_9358-protein ID=mRNA_9358-protein|Name=jgi.p|Nanoce1779_2|606537|organism=Nannochloropsis oceanica|type=polypeptide|length=261bp
MDVTGSESMRRMTSLLSRRDLRGLPSDTALSALVLMPGKSFSLTAASTLA
MASLSPEEASLKTSCEEKKQEWQRIKKRDEHTHKRVASIHLQGTGGIQLL
RKRPKSPKHQEINIFSRKGERQPRPVELEISQDSCHPFLPPSLHTLKPSA
SSASNSDKTRVEMVGSFMVLSMSGKAVIIALMPAAKPALVPSASRRRPVI
CLKPSKAARRGSFSMIVCWISALSRTAFIPSDWKLLVNTDMTSRPLRQAS
CIMVSSASGL* back to topmRNA from alignment at scaffold_35:199904..202724- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9358 ID=mRNA_9358|Name=jgi.p|Nanoce1779_2|606537|organism=Nannochloropsis oceanica|type=mRNA|length=2821bp|location=Sequence derived from alignment at scaffold_35:199904..202724- (Nannochloropsis oceanica)
CGACACGCCGACCTCCCTCCCGTCTCACAAGGAGACCGAGCAAGAGGCCA
GCGGACACTTTCTCCCTCCCTCCCTCCCTGAGCGCACATTATAAATATAT
AGACGTATGTACGTAATTGTATCGAAATTTATTTATCACATAAAGAAGCG
CAGGACAAGAGATTCTGAAACGGAAAGAGGCAGAGGAGGAAAAGGGAGAG
CACGCGTTGATGCGCCTACTAGAGACGCAATCCTCCGTCCCTCCCTCCAT
CCTTCCCGCTGTCATGGTCCATAGCTCCTCTTCTCTCCGTCCCTCCCTCC
CTCCGTCCGGTCGCCTTTCCATCGTAATCGTACTGTTTGAGTAGTGAGTG
ACACGTCACAATTAGCCAGCCCTCCGCCTCATCCTCCCTCCCCCCGTCCG
AGCACCCTCCATCCACGAACGTACAAATCAAAACATTAGGAAATGATGGT
ACATGGTCTTGTCTTTCCCTCCCTCCCTTCCTGCTTGCCCTCATAAAATA
CACAGGAGTGGGTGCCGTCCATCGGCACGCTCCATCACAGAGCCATCTCT
CCCTCCATCTCTTCCCATTCTCGTGGCCCTCGTTCACGAGTTTCTGTGGT
TGGAGGGAAAGAGCGAGAAAGACATGGAGGGCAGGTGAGCCGACGGTAGA
CAAGCCGAAAAGAAAAGGAAGGGAGGGAGAGGAGGAAGGTGGGCAGGAAA
AAAAACTACGCACAGAATCGGAAGCGGCGGTTGGCGGCGTAATTCTTTAC
AAATTCGTCCATCTCTTCGGGGGAGTTCGCGCGGAGGGCCATGGACGTGA
CTGGATCAGAGTCGATGAGGCGCATGACCTGGGAGGAGGAAGAGGGAGGG
AGGGAGGGATCAGCACGTGATTGTTTTGAGTGATTAAATGGAAAATAAAG
ACAGTCTTCTCCAGTTCCCCTTCTTTTCTTCCTCTCTTCCTCGTACCTCC
TTGTTGTCGAGAAGGGACTTGAGGGGGTTGCCTTCGGACACGGCCTGTGG
TGGGAAGGGAGAAGGAATAAGGCGGAGGAATGAGAGGCGTAAGGGACGGG
GTAGCTAGAACAAGCTTTCTTCATCCTATTTTCTTCATTGCAAAAAGGAC
GAGAGTAGTGATGATAAAGGTAATGCCTCCCCATACACACAGCGCACACG
GTCTTTCTGTACTTTCATTTCATGCCTCAGGCCTCGACGATATTCAACGG
GTATTGGAAACATGAGTCGACACAACTTTCTCCCTCCCTCCCCCGTGTCT
GAAGGTTTTGTTGCTTACCTTGAGCGCGCTGGTGTTAATGCCGGGGAAGA
GCTTCTCGTTGACCGCAGCCTCGACCTTGGCCATGGCCTCCTTGTCGCCC
GAGGAGGCGTCGTTGAAGACCTCCTGTGAGGAGAAAAAGCAGGAATGGCA
GAGGATAAAAAAGAGAGATGAACACACACATAAAAGGGTGGCGTCCATAC
ATTTACAAGGGACTGGTGGTATCCAGCTCCTACGGAAAAGACCAAAGAGT
CCAAAACATCAAGAAATCAACATCTTCTCTCGCAAAGGGGAGAGGCAGCC
ACGGCCAGTAGAACTAGAAATCTCTCAAGATTCGTGTCACCCCTTCCTCC
CTCCCTCCCTCCATACACTGAAGCCGTCGGCGTCGTCGGCCAGCAACTCG
GACAAGACGCGGGTGGAGATGGTGGGGTCCTTCATGGTCTTGAGCATGTC
AGGCAAGGCAGTCATCATCGCATTGATGCCAGCGGCAAAGCCCGCCTTGG
TCTAGGGGAGGGAGGGAGGAGGGAGGGATGGGAGGGAGGGTGGGTGTAAG
CTGGACGCATGTATATTTCTTGAGAAGGAATCAGACCAGAACGATTTCCT
CCCTCATTCTATTTCCTTACCCCTTCGGCATCAAGGCGGCGGCCGGTGAT
CTGCTTGAAACCGTCGAAGGCCGCGAGGAGGGGCAGCTTCTCCATGATCG
TGTGCTGGATCTCGGCGTTGTCGAGGACGGCCTAAGGCGACGGAGGGAGG
AAGTCATTTCATGAGAGAGGTGTTGCCGAATCTCGGCGCGGTCTAGAAGA
GGACCCACCTCCGTTCCACTTACCTTCATCCCCTCCGACTGGAAGTTGCT
CGTGAACACGGACATGACATCCAGGCCGTTGCGCCAGGCGTCCTACGTAT
GAAAGAAGGGAGGTGGAGAGAAACGACAGGCGTGAGCTTTTCTACATTCA
TTCAATAATAAGGCGATGTTTGACAGGGCTCTCCACAGACAGGATATCGT
TTCACCTTCCGACTGCATTTCTACGTCATCCTCCTACCTGCATCATGGTG
AGCTCGGCGTCGGGCTTGTAGGCGGGGAGCATGTCCTTCAGGGCACCGGT
GGTCATTTGCTATGGAAGAGAGAATGGGAGGGACGGAGGAAGAGGAGTGA
ATGGGATTGTCGGTGCGATGGATGTCCGTCCTTCTAGGGCACGGCACCTG
AGAGAAGAGCCCGTTTTTGATGAATGTCTTAGACGAGCGAACGAGCAGGC
AGGAAAGAGGAGGGCAGAGAGGGAGAAGGAAGATTTCGGTGAGTGTACAT
ATGCATCTCACCCAAATAACGCCTGATTTAATACAGTTCCTGATGACGCC
AGCGTGTCAAAACAAATCGTCTTTAATGACATGCATTTCTATCTTCCTCC
GTTCCTATTCCCTTCCTCCTTGTCCCTCTTTTTCTTTACCTGCCTGCGGC
GCATGGGGCTCTCGGCAGTGGCGAGGCCAGCAAAGGCGAATATGGCCAGA
GCGACCGCGGAACGAAACAGACGAGCCATTGTATATGTAGCTTGTGGATG
ATGGGTAGCGTGTCTTGCTGT back to topCoding sequence (CDS) from alignment at scaffold_35:199904..202724- >mRNA_9358 ID=mRNA_9358|Name=jgi.p|Nanoce1779_2|606537|organism=Nannochloropsis oceanica|type=CDS|length=4698bp|location=Sequence derived from alignment at scaffold_35:199904..202724- (Nannochloropsis oceanica)
CTGCATCATGGTGAGCTCGGCGTCGGGCTTGTAGCTTCATCCCCTCCGAC
TGGAAGTTGCTCGTGAACACGGACATGACATCCAGGCCGTTGCGCCAGGC
GTCCCCTTCGGCATCAAGGCGGCGGCCGGTGATCTGCTTGAAACCGTCGA
AGGCCGCGAGGAGGGGCAGCTTCTCCATGATCGTGTGCTGGATCTCGGCG
TTGTCGAGGACGGCCTTGAGCGCGCTGGTGTTAATGCCGGGGAAGAGCTT
CTCGTTGACCGCAGCCTCGACCTTGGCCATGGCCTCCTTGTCGCCCGAGG
AGGCGTCGTTGAAGACCTCCTGTGAGGAGAAAAAGCAGGAATGGCAGAGG
ATAAAAAAGAGAGATGAACACACACATAAAAGGGTGGCGTCCATACATTT
ACAAGGGACTGGTGGTATCCAGCTCCTACGGAAAAGACCAAAGAGTCCAA
AACATCAAGAAATCAACATCTTCTCTCGCAAAGGGGAGAGGCAGCCACGG
CCAGTAGAACTAGAAATCTCTCAAGATTCGTGTCACCCCTTCCTCCCTCC
CTCCCTCCATACACTGAAGCCGTCGGCGTCGTCGGCCAGCAACTCGGACA
AGACGCGGGTGGAGATGGTGGGGTCCTTCATGGTCTTGAGCATGTCAGGC
AAGGCAGTCATCATCGCATTGATGCCAGCGGCAAAGCCCGCCTTGGTCTC
CTTGTTGTCGAGAAGGGACTTGAGGGGGTTGCCTTCGGACACGGCATGGA
CGTGACTGGATCAGAGTCGATGAGGCGCATGACCTGCATCATGGTGAGCT
CGGCGTCGGGCTTGTAGCTTCATCCCCTCCGACTGGAAGTTGCTCGTGAA
CACGGACATGACATCCAGGCCGTTGCGCCAGGCGTCCCCTTCGGCATCAA
GGCGGCGGCCGGTGATCTGCTTGAAACCGTCGAAGGCCGCGAGGAGGGGC
AGCTTCTCCATGATCGTGTGCTGGATCTCGGCGTTGTCGAGGACGGCCTT
GAGCGCGCTGGTGTTAATGCCGGGGAAGAGCTTCTCGTTGACCGCAGCCT
CGACCTTGGCCATGGCCTCCTTGTCGCCCGAGGAGGCGTCGTTGAAGACC
TCCTGTGAGGAGAAAAAGCAGGAATGGCAGAGGATAAAAAAGAGAGATGA
ACACACACATAAAAGGGTGGCGTCCATACATTTACAAGGGACTGGTGGTA
TCCAGCTCCTACGGAAAAGACCAAAGAGTCCAAAACATCAAGAAATCAAC
ATCTTCTCTCGCAAAGGGGAGAGGCAGCCACGGCCAGTAGAACTAGAAAT
CTCTCAAGATTCGTGTCACCCCTTCCTCCCTCCCTCCCTCCATACACTGA
AGCCGTCGGCGTCGTCGGCCAGCAACTCGGACAAGACGCGGGTGGAGATG
GTGGGGTCCTTCATGGTCTTGAGCATGTCAGGCAAGGCAGTCATCATCGC
ATTGATGCCAGCGGCAAAGCCCGCCTTGGTCTCCTTGTTGTCGAGAAGGG
ACTTGAGGGGGTTGCCTTCGGACACGGCATGGACGTGACTGGATCAGAGT
CGATGAGGCGCATGACCTGCATCATGGTGAGCTCGGCGTCGGGCTTGTAG
CTTCATCCCCTCCGACTGGAAGTTGCTCGTGAACACGGACATGACATCCA
GGCCGTTGCGCCAGGCGTCCCCTTCGGCATCAAGGCGGCGGCCGGTGATC
TGCTTGAAACCGTCGAAGGCCGCGAGGAGGGGCAGCTTCTCCATGATCGT
GTGCTGGATCTCGGCGTTGTCGAGGACGGCCTTGAGCGCGCTGGTGTTAA
TGCCGGGGAAGAGCTTCTCGTTGACCGCAGCCTCGACCTTGGCCATGGCC
TCCTTGTCGCCCGAGGAGGCGTCGTTGAAGACCTCCTGTGAGGAGAAAAA
GCAGGAATGGCAGAGGATAAAAAAGAGAGATGAACACACACATAAAAGGG
TGGCGTCCATACATTTACAAGGGACTGGTGGTATCCAGCTCCTACGGAAA
AGACCAAAGAGTCCAAAACATCAAGAAATCAACATCTTCTCTCGCAAAGG
GGAGAGGCAGCCACGGCCAGTAGAACTAGAAATCTCTCAAGATTCGTGTC
ACCCCTTCCTCCCTCCCTCCCTCCATACACTGAAGCCGTCGGCGTCGTCG
GCCAGCAACTCGGACAAGACGCGGGTGGAGATGGTGGGGTCCTTCATGGT
CTTGAGCATGTCAGGCAAGGCAGTCATCATCGCATTGATGCCAGCGGCAA
AGCCCGCCTTGGTCTCCTTGTTGTCGAGAAGGGACTTGAGGGGGTTGCCT
TCGGACACGGCATGGACGTGACTGGATCAGAGTCGATGAGGCGCATGACC
TGCATCATGGTGAGCTCGGCGTCGGGCTTGTAGCTTCATCCCCTCCGACT
GGAAGTTGCTCGTGAACACGGACATGACATCCAGGCCGTTGCGCCAGGCG
TCCCCTTCGGCATCAAGGCGGCGGCCGGTGATCTGCTTGAAACCGTCGAA
GGCCGCGAGGAGGGGCAGCTTCTCCATGATCGTGTGCTGGATCTCGGCGT
TGTCGAGGACGGCCTTGAGCGCGCTGGTGTTAATGCCGGGGAAGAGCTTC
TCGTTGACCGCAGCCTCGACCTTGGCCATGGCCTCCTTGTCGCCCGAGGA
GGCGTCGTTGAAGACCTCCTGTGAGGAGAAAAAGCAGGAATGGCAGAGGA
TAAAAAAGAGAGATGAACACACACATAAAAGGGTGGCGTCCATACATTTA
CAAGGGACTGGTGGTATCCAGCTCCTACGGAAAAGACCAAAGAGTCCAAA
ACATCAAGAAATCAACATCTTCTCTCGCAAAGGGGAGAGGCAGCCACGGC
CAGTAGAACTAGAAATCTCTCAAGATTCGTGTCACCCCTTCCTCCCTCCC
TCCCTCCATACACTGAAGCCGTCGGCGTCGTCGGCCAGCAACTCGGACAA
GACGCGGGTGGAGATGGTGGGGTCCTTCATGGTCTTGAGCATGTCAGGCA
AGGCAGTCATCATCGCATTGATGCCAGCGGCAAAGCCCGCCTTGGTCTCC
TTGTTGTCGAGAAGGGACTTGAGGGGGTTGCCTTCGGACACGGCATGGAC
GTGACTGGATCAGAGTCGATGAGGCGCATGACCTGCATCATGGTGAGCTC
GGCGTCGGGCTTGTAGCTTCATCCCCTCCGACTGGAAGTTGCTCGTGAAC
ACGGACATGACATCCAGGCCGTTGCGCCAGGCGTCCCCTTCGGCATCAAG
GCGGCGGCCGGTGATCTGCTTGAAACCGTCGAAGGCCGCGAGGAGGGGCA
GCTTCTCCATGATCGTGTGCTGGATCTCGGCGTTGTCGAGGACGGCCTTG
AGCGCGCTGGTGTTAATGCCGGGGAAGAGCTTCTCGTTGACCGCAGCCTC
GACCTTGGCCATGGCCTCCTTGTCGCCCGAGGAGGCGTCGTTGAAGACCT
CCTGTGAGGAGAAAAAGCAGGAATGGCAGAGGATAAAAAAGAGAGATGAA
CACACACATAAAAGGGTGGCGTCCATACATTTACAAGGGACTGGTGGTAT
CCAGCTCCTACGGAAAAGACCAAAGAGTCCAAAACATCAAGAAATCAACA
TCTTCTCTCGCAAAGGGGAGAGGCAGCCACGGCCAGTAGAACTAGAAATC
TCTCAAGATTCGTGTCACCCCTTCCTCCCTCCCTCCCTCCATACACTGAA
GCCGTCGGCGTCGTCGGCCAGCAACTCGGACAAGACGCGGGTGGAGATGG
TGGGGTCCTTCATGGTCTTGAGCATGTCAGGCAAGGCAGTCATCATCGCA
TTGATGCCAGCGGCAAAGCCCGCCTTGGTCTCCTTGTTGTCGAGAAGGGA
CTTGAGGGGGTTGCCTTCGGACACGGCATGGACGTGACTGGATCAGAGTC
GATGAGGCGCATGACCTGCATCATGGTGAGCTCGGCGTCGGGCTTGTAGC
TTCATCCCCTCCGACTGGAAGTTGCTCGTGAACACGGACATGACATCCAG
GCCGTTGCGCCAGGCGTCCCCTTCGGCATCAAGGCGGCGGCCGGTGATCT
GCTTGAAACCGTCGAAGGCCGCGAGGAGGGGCAGCTTCTCCATGATCGTG
TGCTGGATCTCGGCGTTGTCGAGGACGGCCTTGAGCGCGCTGGTGTTAAT
GCCGGGGAAGAGCTTCTCGTTGACCGCAGCCTCGACCTTGGCCATGGCCT
CCTTGTCGCCCGAGGAGGCGTCGTTGAAGACCTCCTGTGAGGAGAAAAAG
CAGGAATGGCAGAGGATAAAAAAGAGAGATGAACACACACATAAAAGGGT
GGCGTCCATACATTTACAAGGGACTGGTGGTATCCAGCTCCTACGGAAAA
GACCAAAGAGTCCAAAACATCAAGAAATCAACATCTTCTCTCGCAAAGGG
GAGAGGCAGCCACGGCCAGTAGAACTAGAAATCTCTCAAGATTCGTGTCA
CCCCTTCCTCCCTCCCTCCCTCCATACACTGAAGCCGTCGGCGTCGTCGG
CCAGCAACTCGGACAAGACGCGGGTGGAGATGGTGGGGTCCTTCATGGTC
TTGAGCATGTCAGGCAAGGCAGTCATCATCGCATTGATGCCAGCGGCAAA
GCCCGCCTTGGTCTCCTTGTTGTCGAGAAGGGACTTGAGGGGGTTGCCTT
CGGACACGGCATGGACGTGACTGGATCAGAGTCGATGAGGCGCATGAC back to top
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