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Properties
| Property Name | Value |
|---|
| TranscriptId | 659136 |
| Track | FilteredModels2 |
| ProteinId | 659050 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_35 | supercontig | scaffold_35:105531..107454 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9332 ID=mRNA_9332|Name=jgi.p|Nanoce1779_2|659050|organism=Nannochloropsis oceanica|type=mRNA|length=855bp
TTCGAGGATTTCACCCGACAGGTCGATCTTTACGGTATTCAAAGCGTGAC
ATTCGCTGGACACAGCCTGGGCGGAGCTATCTCACAGGTGGCCGCGGCCT
TCATGGTCAAGCATTACAGTCACATCAAAATTAATTGCGTCACATTCGGA
TCACCACAGGTCGGCGATCGGACCTTCACTGATTTCTTGAACGCCCGTGT
CAATCTCCGACGCATGGCCTACATTGGATCCGGGCAGCTTAATGAGCCGG
CAGAACGAGGCCTTAATTACGGCCTGGGCGACGTGATCACTCAGATGCCT
CTGGCGTGCTACAACCTCTCCATGCCCTTTTGCTCGCATATGACGTTTAT
CGACAACAAGGACGATCTCTCAAGTTTCCAATTCGTCATGGCGGCGGGCA
ACGTTCCGATCTACGCTTCCGACCTGCGAAATACCCAGGAGTGGCTGAAA
AAGGAAAATTTTCTTTTTGGAGCCCGGACGTTTAGAGACATCCCAGAAGG
AGCAATGGCTTGTCACATATGCTCCTATGCGTGCTGGACCTCGGCCGCAA
CTGACGACCCTGACAACCGGTGTTATTTCTCCGGGAAGGGAGGGAGGGAG
GGAGGGAAGGAGGGAGGGCAGGCGGAAGGGAGGTATTTGTGCGAGATTGA
TTTGACCGAGAGTTTGACTGCTCGTTTTCCCAATTTGGAAGGGAATCCGG
TTAATAGCGACTTGGTGCGTGAGGGGTCAGTGGCAGAGGGGAAGGGAGGG
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGAGGCGG
CGGGTTAATGGATGGAATGTTGATGGGGGGGAAAAGGGGGTTGAGGATCA
AGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|659050 >mRNA_9332-protein ID=mRNA_9332-protein|Name=jgi.p|Nanoce1779_2|659050|organism=Nannochloropsis oceanica|type=polypeptide|length=285bp
FEDFTRQVDLYGIQSVTFAGHSLGGAISQVAAAFMVKHYSHIKINCVTFG
SPQVGDRTFTDFLNARVNLRRMAYIGSGQLNEPAERGLNYGLGDVITQMP
LACYNLSMPFCSHMTFIDNKDDLSSFQFVMAAGNVPIYASDLRNTQEWLK
KENFLFGARTFRDIPEGAMACHICSYACWTSAATDDPDNRCYFSGKGGRE
GGKEGGQAEGRYLCEIDLTESLTARFPNLEGNPVNSDLVREGSVAEGKGG
GGGGGGGGGGGGGGGGGGLMDGMLMGGKRGLRIK* back to topmRNA from alignment at scaffold_35:105531..107454- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9332 ID=mRNA_9332|Name=jgi.p|Nanoce1779_2|659050|organism=Nannochloropsis oceanica|type=mRNA|length=1924bp|location=Sequence derived from alignment at scaffold_35:105531..107454- (Nannochloropsis oceanica)
TTCGAGGATTTCACCCGACAGGTCGATCTTTACGGTATTCAAAGCGTGAC
ATTCGCTGGACACAGGTAAGGGGGCAGGCAGGGGGAAGGGGAGGGGGGGG
GAACCTATCATCATCACGGTCATCTGCAAACTCATGTCACTGACTCATGC
ATCCCTCCCTCACTATCTCATTTCCTCCTTCCTAATTCTCATTTCCTCCT
TCCTAATTCTCTTTGCCTTTCAGCCTGGGCGGAGCTATCTCACAGGTGGC
CGCGGCCTTCATGGTCAAGCATTACAGTCACATCAAAATTAATTGCGTCA
CATTCGGGTACGTTGTCTTCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTT
CCTCCCTTGCTTCCTTCCTCCCTTACCTTATGGCTTCTGACAGTGTCATA
CTTTAATAATATAATTATTATTGTTAATAATTCTAAAAACGCAGCACATC
GCCCATCTGGATAGAAGGACCTCTCACTTCTCTTCCTCCCTCCCTCCCCC
CTTCCTTATTCAGATCACCACAGGTCGGCGATCGGACCTTCACTGATTTC
TTGAACGCCCGTGTCAATCTCCGACGCATGGCCTACATTGGATCCGGGCA
GCTTAATGAGCCGGCAGAACGAGGCCTTAATTACGGCCTGGGCGACGTGA
TCACTCAGGTACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTGCCTGCCTGCCTGCCTTGAGGGACACATCGACCTTCACAAGAGAG
ATGGCTTTTCCTTACCTTTTTTTGAAAGTTGGAGGGAAAAGAAACGGCAA
GTTGATCCAGTATTTCAAACATCCACCACTCTATGCTGTTTATCATGTGA
TCTTCGTCAACCGCTCCCTCACTCAATTCCTCCCTCCCTCCCTCCTTCCC
CAGATGCCTCTGGCGTGCTACAACCTCTCCATGCCCTTTTGCTCGCATAT
GACGTTTATCGACAACAAGGACGATCTCTCAAGTTTCCAATTCGTCATGG
CGGCGGGCAACGTTCCGATCTACGCTTCCGACCTGCGAAATACCCAGGAG
TGGCTGAAAAAGGTAAGCGGGGGGGAAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGTGCTAAGGGAGGGAGAGGGAGGAAGAGGGAGGGAGG
GAGGGAGAGGGAGGGAGAGGGAGGGAGGGAGGGAGGGAGGGAGAGGGAGT
GCTAAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGTGCTAAGGGAGGGAGA
GGAAGGAAGAGGGAGGGAGGGAAGGAGGGAGTGCTAAGAGAGGGAGAGGG
AGGAAGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAAGGGAAGGAGCGACG
ACCATCCTCTCGATTCTGTGGGGGGCGGTGCGTGTGTCTTCCGTCCTTTC
GTAAGAAAAAGGGAGTCAAGAAGGGAAAGAGCGCTCGTGTGTGTATGTGT
GTGTGTGTGTGTTCTCCCCTTCCATCCGTTCACGTCTTCCCTTCCCCCCC
CCTCCCTCGGTCCCTTCCTCAGGAAAATTTTCTTTTTGGAGCCCGGACGT
TTAGAGACATCCCAGAAGGAGCAATGGCTTGTCACATATGCTCCTATGCG
TGCTGGACCTCGGCCGCAACTGACGACCCTGACAACCGGTGTTATTTCTC
CGGGAAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGCAGGCGGAAGGGA
GGTATTTGTGCGAGATTGATTTGACCGAGAGTTTGACTGCTCGTTTTCCC
AATTTGGAAGGGAATCCGGTTAATAGCGACTTGGTGCGTGAGGGGTCAGT
GGCAGAGGGGAAGGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGCGGAGGAGGCGGCGGGTTAATGGATGGAATGTTGATGGGGGGG
AAAAGGGGGTTGAGGATCAAGTAG back to topCoding sequence (CDS) from alignment at scaffold_35:105531..107454- >mRNA_9332 ID=mRNA_9332|Name=jgi.p|Nanoce1779_2|659050|organism=Nannochloropsis oceanica|type=CDS|length=4275bp|location=Sequence derived from alignment at scaffold_35:105531..107454- (Nannochloropsis oceanica)
GAAAATTTTCTTTTTGGAGCCCGGACGTTTAGAGACATCCCAGAAGGAGC
AATGGCTTGTCACATATGCTCCTATGCGTGCTGGACCTCGGCCGCAACTG
ACGACCCTGACAACCGGTGTTATTTCTCCGGGAAGGGAGGGAGGGAGGGA
GGGAAGGAGGGAGGGCAGGCGGAAGGGAGGTATTTGTGCGAGATTGATTT
GACCGAGAGTTTGACTGCTCGTTTTCCCAATTTGGAAGGGAATCCGGTTA
ATAGCGACTTGGTGCGTGAGGGGTCAGTGGCAGAGGGGAAGGGAGGGGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGAGGCGGCGG
GTTAATGGATGGAATGTTGATGGGGGGGAAAAGGGGGTTGAGGATCAAGT
AGATGCCTCTGGCGTGCTACAACCTCTCCATGCCCTTTTGCTCGCATATG
ACGTTTATCGACAACAAGGACGATCTCTCAAGTTTCCAATTCGTCATGGC
GGCGGGCAACGTTCCGATCTACGCTTCCGACCTGCGAAATACCCAGGAGT
GGCTGAAAAAGATCACCACAGGTCGGCGATCGGACCTTCACTGATTTCTT
GAACGCCCGTGTCAATCTCCGACGCATGGCCTACATTGGATCCGGGCAGC
TTAATGAGCCGGCAGAACGAGGCCTTAATTACGGCCTGGGCGACGTGATC
ACTCAGCCTGGGCGGAGCTATCTCACAGGTGGCCGCGGCCTTCATGGTCA
AGCATTACAGTCACATCAAAATTAATTGCGTCACATTCGGTTCGAGGATT
TCACCCGACAGGTCGATCTTTACGGTATTCAAAGCGTGACATTCGCTGGA
CACAGGAAAATTTTCTTTTTGGAGCCCGGACGTTTAGAGACATCCCAGAA
GGAGCAATGGCTTGTCACATATGCTCCTATGCGTGCTGGACCTCGGCCGC
AACTGACGACCCTGACAACCGGTGTTATTTCTCCGGGAAGGGAGGGAGGG
AGGGAGGGAAGGAGGGAGGGCAGGCGGAAGGGAGGTATTTGTGCGAGATT
GATTTGACCGAGAGTTTGACTGCTCGTTTTCCCAATTTGGAAGGGAATCC
GGTTAATAGCGACTTGGTGCGTGAGGGGTCAGTGGCAGAGGGGAAGGGAG
GGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGAGGC
GGCGGGTTAATGGATGGAATGTTGATGGGGGGGAAAAGGGGGTTGAGGAT
CAAGTAGATGCCTCTGGCGTGCTACAACCTCTCCATGCCCTTTTGCTCGC
ATATGACGTTTATCGACAACAAGGACGATCTCTCAAGTTTCCAATTCGTC
ATGGCGGCGGGCAACGTTCCGATCTACGCTTCCGACCTGCGAAATACCCA
GGAGTGGCTGAAAAAGATCACCACAGGTCGGCGATCGGACCTTCACTGAT
TTCTTGAACGCCCGTGTCAATCTCCGACGCATGGCCTACATTGGATCCGG
GCAGCTTAATGAGCCGGCAGAACGAGGCCTTAATTACGGCCTGGGCGACG
TGATCACTCAGCCTGGGCGGAGCTATCTCACAGGTGGCCGCGGCCTTCAT
GGTCAAGCATTACAGTCACATCAAAATTAATTGCGTCACATTCGGTTCGA
GGATTTCACCCGACAGGTCGATCTTTACGGTATTCAAAGCGTGACATTCG
CTGGACACAGGAAAATTTTCTTTTTGGAGCCCGGACGTTTAGAGACATCC
CAGAAGGAGCAATGGCTTGTCACATATGCTCCTATGCGTGCTGGACCTCG
GCCGCAACTGACGACCCTGACAACCGGTGTTATTTCTCCGGGAAGGGAGG
GAGGGAGGGAGGGAAGGAGGGAGGGCAGGCGGAAGGGAGGTATTTGTGCG
AGATTGATTTGACCGAGAGTTTGACTGCTCGTTTTCCCAATTTGGAAGGG
AATCCGGTTAATAGCGACTTGGTGCGTGAGGGGTCAGTGGCAGAGGGGAA
GGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAG
GAGGCGGCGGGTTAATGGATGGAATGTTGATGGGGGGGAAAAGGGGGTTG
AGGATCAAGTAGATGCCTCTGGCGTGCTACAACCTCTCCATGCCCTTTTG
CTCGCATATGACGTTTATCGACAACAAGGACGATCTCTCAAGTTTCCAAT
TCGTCATGGCGGCGGGCAACGTTCCGATCTACGCTTCCGACCTGCGAAAT
ACCCAGGAGTGGCTGAAAAAGATCACCACAGGTCGGCGATCGGACCTTCA
CTGATTTCTTGAACGCCCGTGTCAATCTCCGACGCATGGCCTACATTGGA
TCCGGGCAGCTTAATGAGCCGGCAGAACGAGGCCTTAATTACGGCCTGGG
CGACGTGATCACTCAGCCTGGGCGGAGCTATCTCACAGGTGGCCGCGGCC
TTCATGGTCAAGCATTACAGTCACATCAAAATTAATTGCGTCACATTCGG
TTCGAGGATTTCACCCGACAGGTCGATCTTTACGGTATTCAAAGCGTGAC
ATTCGCTGGACACAGGAAAATTTTCTTTTTGGAGCCCGGACGTTTAGAGA
CATCCCAGAAGGAGCAATGGCTTGTCACATATGCTCCTATGCGTGCTGGA
CCTCGGCCGCAACTGACGACCCTGACAACCGGTGTTATTTCTCCGGGAAG
GGAGGGAGGGAGGGAGGGAAGGAGGGAGGGCAGGCGGAAGGGAGGTATTT
GTGCGAGATTGATTTGACCGAGAGTTTGACTGCTCGTTTTCCCAATTTGG
AAGGGAATCCGGTTAATAGCGACTTGGTGCGTGAGGGGTCAGTGGCAGAG
GGGAAGGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
CGGAGGAGGCGGCGGGTTAATGGATGGAATGTTGATGGGGGGGAAAAGGG
GGTTGAGGATCAAGTAGATGCCTCTGGCGTGCTACAACCTCTCCATGCCC
TTTTGCTCGCATATGACGTTTATCGACAACAAGGACGATCTCTCAAGTTT
CCAATTCGTCATGGCGGCGGGCAACGTTCCGATCTACGCTTCCGACCTGC
GAAATACCCAGGAGTGGCTGAAAAAGATCACCACAGGTCGGCGATCGGAC
CTTCACTGATTTCTTGAACGCCCGTGTCAATCTCCGACGCATGGCCTACA
TTGGATCCGGGCAGCTTAATGAGCCGGCAGAACGAGGCCTTAATTACGGC
CTGGGCGACGTGATCACTCAGCCTGGGCGGAGCTATCTCACAGGTGGCCG
CGGCCTTCATGGTCAAGCATTACAGTCACATCAAAATTAATTGCGTCACA
TTCGGTTCGAGGATTTCACCCGACAGGTCGATCTTTACGGTATTCAAAGC
GTGACATTCGCTGGACACAGGAAAATTTTCTTTTTGGAGCCCGGACGTTT
AGAGACATCCCAGAAGGAGCAATGGCTTGTCACATATGCTCCTATGCGTG
CTGGACCTCGGCCGCAACTGACGACCCTGACAACCGGTGTTATTTCTCCG
GGAAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGCAGGCGGAAGGGAGG
TATTTGTGCGAGATTGATTTGACCGAGAGTTTGACTGCTCGTTTTCCCAA
TTTGGAAGGGAATCCGGTTAATAGCGACTTGGTGCGTGAGGGGTCAGTGG
CAGAGGGGAAGGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGCGGAGGAGGCGGCGGGTTAATGGATGGAATGTTGATGGGGGGGAA
AAGGGGGTTGAGGATCAAGTAGATGCCTCTGGCGTGCTACAACCTCTCCA
TGCCCTTTTGCTCGCATATGACGTTTATCGACAACAAGGACGATCTCTCA
AGTTTCCAATTCGTCATGGCGGCGGGCAACGTTCCGATCTACGCTTCCGA
CCTGCGAAATACCCAGGAGTGGCTGAAAAAGATCACCACAGGTCGGCGAT
CGGACCTTCACTGATTTCTTGAACGCCCGTGTCAATCTCCGACGCATGGC
CTACATTGGATCCGGGCAGCTTAATGAGCCGGCAGAACGAGGCCTTAATT
ACGGCCTGGGCGACGTGATCACTCAGCCTGGGCGGAGCTATCTCACAGGT
GGCCGCGGCCTTCATGGTCAAGCATTACAGTCACATCAAAATTAATTGCG
TCACATTCGGTTCGAGGATTTCACCCGACAGGTCGATCTTTACGGTATTC
AAAGCGTGACATTCGCTGGACACAG back to top
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