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Properties
Property Name | Value |
TranscriptId | 606492 |
Track | FilteredModels2 |
ProteinId | 606406 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_35 | supercontig | scaffold_35:89778..92249 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9325 ID=mRNA_9325|Name=jgi.p|Nanoce1779_2|606406|organism=Nannochloropsis oceanica|type=mRNA|length=1609bp AAGGGCCAGAGCAGAGGTGGATGGGGATGATGAAAGAAGAGAAGAGGGAG ATGAAAGAGAAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGAT GGAGGAGGAGGATGGGTGACTGGTTTGTGGCGACGCCGTTTCCACCGTCG GGAAGGAGCGGGGGACGAGGGTGGAGGCCGATGGGAGGGAGGAGGAAGAA GGAGTGGGATGGAGGGTGGAAGCATGTGGTCTCAGTTGGGAGGATGCTTG GCCTTAGCAGTTGTGGTTTTGGCAATAGAAGCAGTCGTTTTGGGAAGACT GGCCGACTATAGAAAACCCTCGTCCTGGGGAGGAGATGGGGGAAGGACGG AGGAAGGGATTATTGCCGCTGGAGGAGAAGGAGGAGGAGGAGGAGTGATC GGTTCAATGAAGCGTTGGGTGCAAGACCATCAAGAGACCCAGATATTGTG GCAGCGATACCGCGAGGTACGGCACGAATTCGAGGGCTACCTCCAAGAGC GGGAGGCGTTAGAACGACCCCAGGGATGGGCCGTACTCACCACAAGTCGT GACAACCGTTTGAAGGTCTCTATCCGTTGGCCCGAGCCGTCGCAGCCCGG GAAAGGCGTTCCGTTGATGATAGCCGAGGGGCTCTTCAAGAACAGAACAG CTGATGCCTTGTGGGAAGCGATGAGGGTGGGGAGTACCCACAAGACCATG CCGCGGCTCGATCCCTTCTATGAGTCTTACACTCCCCTGCACGTCTACAA CCACCAAATCGAGGTGAAAGGCCTTCCTCTCCCTCCTTCCCTCCTTCCCT CGCACTCTATCATGATCCTAAATTTGTCCCATCCCCTCCCTCCATCCCTC CCTCCCTCCCTCCCTTTCTCCCTCTCTCCCTTTCTCCCCCAGATCGGACG CCGCACCACCAAACGCTTGCTCGTCTACGGGAAACGAGACTTTATTTTTG CGTCCTTCGAAGAAAAAGAAGCAGCAGCAGCAGCTACCGGCAAGAAGGCA AAGCGCAGCCAGAAGAGGCAGGGAGGAAGGGAGGGAGGAAGGGAAGGCGA ACAACTCCACGTCACAGCCAGCATCTCCCTCTCCCTCGAAGGGACACAAC AAATCGGTGGCCGTCACACCTTCCTCCCTCCCTCTTTCCCCCCCTCCGGC CTGGGGGAAAGAGAGGGTTATACCCGCGCGCACCAGGACCTTGTCGGTTT CTATTTCCCCTGTCCGGAGGATGCGTTTGCCACACGCGCGACTATAATCA TGCGAACCGATTTGAAAGGCAATATCCCGCATTGGGTGTTTAGTAAAAGC GTGGGCACCACTGGCATGCATTTTTTGCAGACGCTCGAGGACATCACCAA GGCGACCGGGAAGAGAAAGTGATGAGAGGGACCTAGATTGAAGGGATGGT GTGTAGGAAGACAGGGAAGGGCAAGTGATAGAGGAAGATCGGAGGGAGGG ACAAAAGAAAACGTGTGTATATTGCTAGCTAGAAAGAGAAGGGGCGCGTA GTTAGAAATGAGAACAAGGACAGCAAAAGAAAGGAAAGTGGAAAAATGAC ACCAGATGCTATGATTTGTTTTCTCTCTTATCCCGCCATCAAATAAGCCA ATCCCAGCC back to topprotein sequence of jgi.p|Nanoce1779_2|606406 >mRNA_9325-protein ID=mRNA_9325-protein|Name=jgi.p|Nanoce1779_2|606406|organism=Nannochloropsis oceanica|type=polypeptide|length=388bp MEGGSMWSQLGGCLALAVVVLAIEAVVLGRLADYRKPSSWGGDGGRTEEG IIAAGGEGGGGGVIGSMKRWVQDHQETQILWQRYREVRHEFEGYLQEREA LERPQGWAVLTTSRDNRLKVSIRWPEPSQPGKGVPLMIAEGLFKNRTADA LWEAMRVGSTHKTMPRLDPFYESYTPLHVYNHQIEVKGLPLPPSLLPSHS IMILNLSHPLPPSLPPSLPFSLSPFLPQIGRRTTKRLLVYGKRDFIFASF EEKEAAAAATGKKAKRSQKRQGGREGGREGEQLHVTASISLSLEGTQQIG GRHTFLPPSFPPSGLGEREGYTRAHQDLVGFYFPCPEDAFATRATIIMRT DLKGNIPHWVFSKSVGTTGMHFLQTLEDITKATGKRK* back to topmRNA from alignment at scaffold_35:89778..92249+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9325 ID=mRNA_9325|Name=jgi.p|Nanoce1779_2|606406|organism=Nannochloropsis oceanica|type=mRNA|length=2472bp|location=Sequence derived from alignment at scaffold_35:89778..92249+ (Nannochloropsis oceanica) AAGGGCCAGAGCAGAGGTGGATGGGGATGATGAAAGAAGAGAAGAGGGAG
ATGAAAGAGAAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGAT
GGAGGAGGAGGATGGGTGACTGGTTTGTGGCGACGCCGTTTCCACCGTCG
GGAAGGAGCGGGGGACGAGGGTGGAGGCCGATGGGAGGGAGGAGGAAGAA
GGAGTGGGATGGAGGGTGGAAGCATGTGGTCTCAGTTGGGAGGATGCTTG
GCCTTAGCAGTTGTGGTTTTGGCAATAGAAGCAGTCGTTTTGGGAAGACT
GGCCGACTATAGAAAACCCTCGTCCTGGGGAGGAGATGGGGGAAGGACGG
AGGAAGGGATTATTGCCGCTGGAGGAGAAGGAGGAGGAGGAGGAGTGATC
GGTTCAATGAAGCGTTGGGTGCAAGACCATCAAGAGACCCAGATATTGTG
GCAGCGATACCGCGAGGTAAAGACCAGAGGGAAGGGAGGGAGGGAGGGGA
GGGAGGGAAGGTTAGGGTTAACCCTAACCATACATGCACCATTCCTATGT
CTCCGTGTCTTCTTTCTTATCATCATGCAAACATCACCGTCGCTGCCATC
CTTTCCCTCCTCTCCTCCCTCTCATGTTTCTCCTCCTCCTTTCCTCCCCT
CCCATTTACTCGCTCACGCACGCTTACGGCACTCATGTGATATATCGATA
TTTCCAAGGTACGGCACGAATTCGAGGGCTACCTCCAAGAGCGGGAGGCG
TTAGAACGACCCCAGGGATGGGCCGTACTCACCACAAGGTAAAGGAGGGA
GGGAGCGAGGGAGCGAGGGAGCGAGGAAAGGGAATGTTGTGTCATTTTTC
ATCTCCACAGGAAGAAGAGGGAGGGTGCTGTGATGCCCCCCCTCGTCCCT
CTTTATTACTTCGCTCCCCGAGCCTTTCCCTGCCGTCCTTACTCTTGTCG
TCATTCCCTTCTCTCCCCTTCCCTTGCTTTCCGTTTCCTTGCCTCGTGTG
AGGGGGGATCGTGCGAGGAGCTTTTGAGAGCTCTCAGACCTCCACGCAAC
GAAATGCTCTGTCACTGACCCCCTCCTTCCCTCCTTCCCTCCCTCCCTGC
CTCCTTCCCTCCCTCCCTCCCTGCCTCTCTCCCGTCCTCCCTAGTCGTGA
CAACCGTTTGAAGGTCTCTATCCGTTGGCCCGAGCCGTCGCAGCCCGGGA
AAGGCGTTCCGTTGATGATAGCCGAGGGGCTCTTCAAGAACAGAACAGCT
GATGCCTTGTGGGAAGCGATGAGGGTGGGGAGGTAGGTGCGGAGGGAGGG
AGGGAGGGAGGGAGGGATGGGCTAGGTCACGCACCTGGTCGATCCGTGGC
TTACCTTTTCCCCGCCCTCCTTCCCTCCCTCCTGCCCTCCCTCCCTCCCT
CCCTCCCTCCCACAGTACCCACAAGACCATGCCGCGGCTCGATCCCTTCT
ATGAGTCTTACACTCCCCTGCACGTCTACAACCACCAAATCGAGGTGAAA
GGCCTTCCTCTCCCTCCTTCCCTCCTTCCCTCGCACTCTATCATGATCCT
AAATTTGTCCCATCCCCTCCCTCCATCCCTCCCTCCCTCCCTCCCTTTCT
CCCTCTCTCCCTTTCTCCCCCAGATCGGACGCCGCACCACCAAACGCTTG
CTCGTCTACGGGAAACGAGACTTTATTTTTGCGTCCTTCGAAGAAAAAGA
AGCAGCAGCAGCAGCTACCGGCAAGAAGGCAAAGCGCAGCCAGAAGAGGC
AGGGAGGAAGGGAGGGAGGAAGGGAAGGCGAACAACTCCACGTCACAGCC
AGCATCTCCCTCTCCCTCGAAGGGACACAACAAATCGGTGGCCGTCACAC
CTTCCTCCCTCCCTCTTTCCCCCCCTCCGGCCTGGGGGAAAGAGAGGGTT
ATACCCGCGCGCACCAGGACCTTGTCGGTTTCTATTTCCCCTGTCCGGAG
GATGCGTTTGCCACACGCGCGACTATAATCATGCGAACCGGTAGGGAGAA
AGGGATGGAGGGAGGGAGGGAGGGAGGAATCTGTGGTGTGTTTGTTACTT
GAGGAGCTTTCGATCTGTCTGACACATACACACATACACACATACACACA
TACACACACCGGACTTACACAGATTTGAAAGGCAATATCCCGCATTGGGT
GTTTAGTAAAAGCGTGGGCACCACTGGCATGCATTTTTTGCAGACGCTCG
AGGACATCACCAAGGCGACCGGGAAGAGAAAGTGATGAGAGGGACCTAGA
TTGAAGGGATGGTGTGTAGGAAGACAGGGAAGGGCAAGTGATAGAGGAAG
ATCGGAGGGAGGGACAAAAGAAAACGTGTGTATATTGCTAGCTAGAAAGA
GAAGGGGCGCGTAGTTAGAAATGAGAACAAGGACAGCAAAAGAAAGGAAA
GTGGAAAAATGACACCAGATGCTATGATTTGTTTTCTCTCTTATCCCGCC
ATCAAATAAGCCAATCCCAGCC back to topCoding sequence (CDS) from alignment at scaffold_35:89778..92249+ >mRNA_9325 ID=mRNA_9325|Name=jgi.p|Nanoce1779_2|606406|organism=Nannochloropsis oceanica|type=CDS|length=5820bp|location=Sequence derived from alignment at scaffold_35:89778..92249+ (Nannochloropsis oceanica) ATGGAGGGTGGAAGCATGTGGTCTCAGTTGGGAGGATGCTTGGCCTTAGC AGTTGTGGTTTTGGCAATAGAAGCAGTCGTTTTGGGAAGACTGGCCGACT ATAGAAAACCCTCGTCCTGGGGAGGAGATGGGGGAAGGACGGAGGAAGGG ATTATTGCCGCTGGAGGAGAAGGAGGAGGAGGAGGAGTGATCGGTTCAAT GAAGCGTTGGGTGCAAGACCATCAAGAGACCCAGATATTGTGGCAGCGAT ACCGCGAGGTACGGCACGAATTCGAGGGCTACCTCCAAGAGCGGGAGGCG TTAGAACGACCCCAGGGATGGGCCGTACTCACCACAAGTCGTGACAACCG TTTGAAGGTCTCTATCCGTTGGCCCGAGCCGTCGCAGCCCGGGAAAGGCG TTCCGTTGATGATAGCCGAGGGGCTCTTCAAGAACAGAACAGCTGATGCC TTGTGGGAAGCGATGAGGGTGGGGAGTACCCACAAGACCATGCCGCGGCT CGATCCCTTCTATGAGTCTTACACTCCCCTGCACGTCTACAACCACCAAA TCGAGGTGAAAGGCCTTCCTCTCCCTCCTTCCCTCCTTCCCTCGCACTCT ATCATGATCCTAAATTTGTCCCATCCCCTCCCTCCATCCCTCCCTCCCTC CCTCCCTTTCTCCCTCTCTCCCTTTCTCCCCCAGATCGGACGCCGCACCA CCAAACGCTTGCTCGTCTACGGGAAACGAGACTTTATTTTTGCGTCCTTC GAAGAAAAAGAAGCAGCAGCAGCAGCTACCGGCAAGAAGGCAAAGCGCAG CCAGAAGAGGCAGGGAGGAAGGGAGGGAGGAAGGGAAGGCGAACAACTCC ACGTCACAGCCAGCATCTCCCTCTCCCTCGAAGGGACACAACAAATCGGT GGCCGTCACACCTTCCTCCCTCCCTCTTTCCCCCCCTCCGGCCTGGGGGA AAGAGAGGGTTATACCCGCGCGCACCAGGACCTTGTCGGTTTCTATTTCC CCTGTCCGGAGGATGCGTTTGCCACACGCGCGACTATAATCATGCGAACC GATTTGAAAGGCAATATCCCGCATTGGGTGTTTAGTAAAAGCGTGGGCAC CACTGGCATGCATTTTTTGCAGACGCTCGAGGACATCACCAAGGCGACCG GGAAGAGAAAGTGAATGGAGGGTGGAAGCATGTGGTCTCAGTTGGGAGGA TGCTTGGCCTTAGCAGTTGTGGTTTTGGCAATAGAAGCAGTCGTTTTGGG AAGACTGGCCGACTATAGAAAACCCTCGTCCTGGGGAGGAGATGGGGGAA GGACGGAGGAAGGGATTATTGCCGCTGGAGGAGAAGGAGGAGGAGGAGGA GTGATCGGTTCAATGAAGCGTTGGGTGCAAGACCATCAAGAGACCCAGAT ATTGTGGCAGCGATACCGCGAGGTACGGCACGAATTCGAGGGCTACCTCC AAGAGCGGGAGGCGTTAGAACGACCCCAGGGATGGGCCGTACTCACCACA AGTCGTGACAACCGTTTGAAGGTCTCTATCCGTTGGCCCGAGCCGTCGCA GCCCGGGAAAGGCGTTCCGTTGATGATAGCCGAGGGGCTCTTCAAGAACA GAACAGCTGATGCCTTGTGGGAAGCGATGAGGGTGGGGAGTACCCACAAG ACCATGCCGCGGCTCGATCCCTTCTATGAGTCTTACACTCCCCTGCACGT CTACAACCACCAAATCGAGGTGAAAGGCCTTCCTCTCCCTCCTTCCCTCC TTCCCTCGCACTCTATCATGATCCTAAATTTGTCCCATCCCCTCCCTCCA TCCCTCCCTCCCTCCCTCCCTTTCTCCCTCTCTCCCTTTCTCCCCCAGAT CGGACGCCGCACCACCAAACGCTTGCTCGTCTACGGGAAACGAGACTTTA TTTTTGCGTCCTTCGAAGAAAAAGAAGCAGCAGCAGCAGCTACCGGCAAG AAGGCAAAGCGCAGCCAGAAGAGGCAGGGAGGAAGGGAGGGAGGAAGGGA AGGCGAACAACTCCACGTCACAGCCAGCATCTCCCTCTCCCTCGAAGGGA CACAACAAATCGGTGGCCGTCACACCTTCCTCCCTCCCTCTTTCCCCCCC TCCGGCCTGGGGGAAAGAGAGGGTTATACCCGCGCGCACCAGGACCTTGT CGGTTTCTATTTCCCCTGTCCGGAGGATGCGTTTGCCACACGCGCGACTA TAATCATGCGAACCGATTTGAAAGGCAATATCCCGCATTGGGTGTTTAGT AAAAGCGTGGGCACCACTGGCATGCATTTTTTGCAGACGCTCGAGGACAT CACCAAGGCGACCGGGAAGAGAAAGTGAATGGAGGGTGGAAGCATGTGGT CTCAGTTGGGAGGATGCTTGGCCTTAGCAGTTGTGGTTTTGGCAATAGAA GCAGTCGTTTTGGGAAGACTGGCCGACTATAGAAAACCCTCGTCCTGGGG AGGAGATGGGGGAAGGACGGAGGAAGGGATTATTGCCGCTGGAGGAGAAG GAGGAGGAGGAGGAGTGATCGGTTCAATGAAGCGTTGGGTGCAAGACCAT CAAGAGACCCAGATATTGTGGCAGCGATACCGCGAGGTACGGCACGAATT CGAGGGCTACCTCCAAGAGCGGGAGGCGTTAGAACGACCCCAGGGATGGG CCGTACTCACCACAAGTCGTGACAACCGTTTGAAGGTCTCTATCCGTTGG CCCGAGCCGTCGCAGCCCGGGAAAGGCGTTCCGTTGATGATAGCCGAGGG GCTCTTCAAGAACAGAACAGCTGATGCCTTGTGGGAAGCGATGAGGGTGG GGAGTACCCACAAGACCATGCCGCGGCTCGATCCCTTCTATGAGTCTTAC ACTCCCCTGCACGTCTACAACCACCAAATCGAGGTGAAAGGCCTTCCTCT CCCTCCTTCCCTCCTTCCCTCGCACTCTATCATGATCCTAAATTTGTCCC ATCCCCTCCCTCCATCCCTCCCTCCCTCCCTCCCTTTCTCCCTCTCTCCC TTTCTCCCCCAGATCGGACGCCGCACCACCAAACGCTTGCTCGTCTACGG GAAACGAGACTTTATTTTTGCGTCCTTCGAAGAAAAAGAAGCAGCAGCAG CAGCTACCGGCAAGAAGGCAAAGCGCAGCCAGAAGAGGCAGGGAGGAAGG GAGGGAGGAAGGGAAGGCGAACAACTCCACGTCACAGCCAGCATCTCCCT CTCCCTCGAAGGGACACAACAAATCGGTGGCCGTCACACCTTCCTCCCTC CCTCTTTCCCCCCCTCCGGCCTGGGGGAAAGAGAGGGTTATACCCGCGCG CACCAGGACCTTGTCGGTTTCTATTTCCCCTGTCCGGAGGATGCGTTTGC CACACGCGCGACTATAATCATGCGAACCGATTTGAAAGGCAATATCCCGC ATTGGGTGTTTAGTAAAAGCGTGGGCACCACTGGCATGCATTTTTTGCAG ACGCTCGAGGACATCACCAAGGCGACCGGGAAGAGAAAGTGAATGGAGGG TGGAAGCATGTGGTCTCAGTTGGGAGGATGCTTGGCCTTAGCAGTTGTGG TTTTGGCAATAGAAGCAGTCGTTTTGGGAAGACTGGCCGACTATAGAAAA CCCTCGTCCTGGGGAGGAGATGGGGGAAGGACGGAGGAAGGGATTATTGC CGCTGGAGGAGAAGGAGGAGGAGGAGGAGTGATCGGTTCAATGAAGCGTT GGGTGCAAGACCATCAAGAGACCCAGATATTGTGGCAGCGATACCGCGAG GTACGGCACGAATTCGAGGGCTACCTCCAAGAGCGGGAGGCGTTAGAACG ACCCCAGGGATGGGCCGTACTCACCACAAGTCGTGACAACCGTTTGAAGG TCTCTATCCGTTGGCCCGAGCCGTCGCAGCCCGGGAAAGGCGTTCCGTTG ATGATAGCCGAGGGGCTCTTCAAGAACAGAACAGCTGATGCCTTGTGGGA AGCGATGAGGGTGGGGAGTACCCACAAGACCATGCCGCGGCTCGATCCCT TCTATGAGTCTTACACTCCCCTGCACGTCTACAACCACCAAATCGAGGTG AAAGGCCTTCCTCTCCCTCCTTCCCTCCTTCCCTCGCACTCTATCATGAT CCTAAATTTGTCCCATCCCCTCCCTCCATCCCTCCCTCCCTCCCTCCCTT TCTCCCTCTCTCCCTTTCTCCCCCAGATCGGACGCCGCACCACCAAACGC TTGCTCGTCTACGGGAAACGAGACTTTATTTTTGCGTCCTTCGAAGAAAA AGAAGCAGCAGCAGCAGCTACCGGCAAGAAGGCAAAGCGCAGCCAGAAGA GGCAGGGAGGAAGGGAGGGAGGAAGGGAAGGCGAACAACTCCACGTCACA GCCAGCATCTCCCTCTCCCTCGAAGGGACACAACAAATCGGTGGCCGTCA CACCTTCCTCCCTCCCTCTTTCCCCCCCTCCGGCCTGGGGGAAAGAGAGG GTTATACCCGCGCGCACCAGGACCTTGTCGGTTTCTATTTCCCCTGTCCG GAGGATGCGTTTGCCACACGCGCGACTATAATCATGCGAACCGATTTGAA AGGCAATATCCCGCATTGGGTGTTTAGTAAAAGCGTGGGCACCACTGGCA TGCATTTTTTGCAGACGCTCGAGGACATCACCAAGGCGACCGGGAAGAGA AAGTGAATGGAGGGTGGAAGCATGTGGTCTCAGTTGGGAGGATGCTTGGC CTTAGCAGTTGTGGTTTTGGCAATAGAAGCAGTCGTTTTGGGAAGACTGG CCGACTATAGAAAACCCTCGTCCTGGGGAGGAGATGGGGGAAGGACGGAG GAAGGGATTATTGCCGCTGGAGGAGAAGGAGGAGGAGGAGGAGTGATCGG TTCAATGAAGCGTTGGGTGCAAGACCATCAAGAGACCCAGATATTGTGGC AGCGATACCGCGAGGTACGGCACGAATTCGAGGGCTACCTCCAAGAGCGG GAGGCGTTAGAACGACCCCAGGGATGGGCCGTACTCACCACAAGTCGTGA CAACCGTTTGAAGGTCTCTATCCGTTGGCCCGAGCCGTCGCAGCCCGGGA AAGGCGTTCCGTTGATGATAGCCGAGGGGCTCTTCAAGAACAGAACAGCT GATGCCTTGTGGGAAGCGATGAGGGTGGGGAGTACCCACAAGACCATGCC GCGGCTCGATCCCTTCTATGAGTCTTACACTCCCCTGCACGTCTACAACC ACCAAATCGAGGTGAAAGGCCTTCCTCTCCCTCCTTCCCTCCTTCCCTCG CACTCTATCATGATCCTAAATTTGTCCCATCCCCTCCCTCCATCCCTCCC TCCCTCCCTCCCTTTCTCCCTCTCTCCCTTTCTCCCCCAGATCGGACGCC GCACCACCAAACGCTTGCTCGTCTACGGGAAACGAGACTTTATTTTTGCG TCCTTCGAAGAAAAAGAAGCAGCAGCAGCAGCTACCGGCAAGAAGGCAAA GCGCAGCCAGAAGAGGCAGGGAGGAAGGGAGGGAGGAAGGGAAGGCGAAC AACTCCACGTCACAGCCAGCATCTCCCTCTCCCTCGAAGGGACACAACAA ATCGGTGGCCGTCACACCTTCCTCCCTCCCTCTTTCCCCCCCTCCGGCCT GGGGGAAAGAGAGGGTTATACCCGCGCGCACCAGGACCTTGTCGGTTTCT ATTTCCCCTGTCCGGAGGATGCGTTTGCCACACGCGCGACTATAATCATG CGAACCGATTTGAAAGGCAATATCCCGCATTGGGTGTTTAGTAAAAGCGT GGGCACCACTGGCATGCATTTTTTGCAGACGCTCGAGGACATCACCAAGG CGACCGGGAAGAGAAAGTGA back to top
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