Properties
| Property Name | Value |
|---|
| TranscriptId | 606437 |
| Track | FilteredModels2 |
| ProteinId | 606351 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_35 | supercontig | scaffold_35:54537..57570 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9314 ID=mRNA_9314|Name=jgi.p|Nanoce1779_2|606351|organism=Nannochloropsis oceanica|type=mRNA|length=909bp
CAAATACGCCCGTCAGTCTGGCAAGTCCCTTCTCTACACATCGCACGCCT
CGTCCCGTTCCCAGGAGCAGCAGCAGGAGCAGCAGCAGGCCCGCCTCCGC
TCTTCCCTCCCGTCGTTTTCCCTCTCGACCGCCCTCCCTCCCGCCCTCCT
CGGCCTGCCGGAGGAGGTTGACTGGGTCAAGGAGGGCGTGGTAACCCCCG
TGAAGAACCAGGGCATGTGCGGCTCTTGCTGGGCGTTCTCCACCACTGGT
GCCTTGGAGGGAGCCTACGCGCTCAAGACGGGCAAGCTCCTCTCCTTTTC
GGAGCAGGAGCTGGTCGACTGCGATGGCAACGACTACGGGTGCAATGGCG
GTCTCATGGACAATGCCTTCAGCTGGGTCCAGAACAACGGAGGCTTGACG
CTGGAGAGCGACTACCCTTACGAAGGAACAGAGGGGAGGTGCAAGTTGAG
CGTGGACCTCGTGGAGGGCACGGAGGTGACGGGATACCGTGACGTGGAGG
GTGGGAATGACAGTGCATTTGTGGTGGCCCTGGCCAAGCAGCCGCTGTCG
GTGGCGATCGAAGCCGACGAACGCGCGTTCCAGTTGTACTCCTCTGGAGT
GTTCTCAAGCTCCTGCGGGACCTCCCTCGACCATGGCGTGCTGGCCGTGG
GCTACGGCACAGAGGACGGGTTGGATTTTATTAAAATCAAGAACTCCTGG
GGCGAGACGTGGGGCGAGGATGGGTACATCCGCCTGAAGCGTGGCGTGCG
TCAGGAGGGCGGGCAATGCGGCGTGCTGATGGCGGCTTCCTACCCCTCCG
TGTAGAGCATGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGACAATTTCGT
GTGTTGATGGCGGCCTCCTACTTCTTTGTGTAGAGCATGGAAGGGAGGGA
GGGAGGGAG back to topprotein sequence of jgi.p|Nanoce1779_2|606351 >mRNA_9314-protein ID=mRNA_9314-protein|Name=jgi.p|Nanoce1779_2|606351|organism=Nannochloropsis oceanica|type=polypeptide|length=197bp
MCGSCWAFSTTGALEGAYALKTGKLLSFSEQELVDCDGNDYGCNGGLMDN
AFSWVQNNGGLTLESDYPYEGTEGRCKLSVDLVEGTEVTGYRDVEGGNDS
AFVVALAKQPLSVAIEADERAFQLYSSGVFSSSCGTSLDHGVLAVGYGTE
DGLDFIKIKNSWGETWGEDGYIRLKRGVRQEGGQCGVLMAASYPSV* back to topmRNA from alignment at scaffold_35:54537..57570- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9314 ID=mRNA_9314|Name=jgi.p|Nanoce1779_2|606351|organism=Nannochloropsis oceanica|type=mRNA|length=3034bp|location=Sequence derived from alignment at scaffold_35:54537..57570- (Nannochloropsis oceanica)
CAAATACGCCCGTCAGTCTGGCAAGTCCCTTCTCTACACATCGCACGCCT
CGTCCCGTTCCCAGGAGCAGCAGCAGGAGCAGCAGCAGGCCCGCCTCCGC
TCTTCCCTCCCGTCGTTTTCCCTCTCGACCGCCCTCCCTCCCGCCCTCCT
CGGCCTGCCGGAGGAGGTTGACTGGGTCAAGGAGGGCGTGGTAACCCCCG
TGAAGAACCAGGGCATGTGCGGGTACGAAGGGAGGGAGGGCGGGAGGGAA
GCGCCAAAATCACTGTTACAATACCAACCCCCGCCACCCCTCCCTCCCCC
CCTCCCTCCCCCCCCGGTAGCTCTTGCTGGGCGTTCTCCACCACTGGTGC
CTTGGAGGGAGCCTACGCGCTCAAGACGGGCAAGCTCCTCTCCTTTTCGG
AGCAGGAGCTGGTCGACTGCGATGGTACATCCCTCCTTCCCTCCCTCCCT
CCCTCGGACTGCCCTTTCAGAGAGCATATCCTCACGTCATTGTCACGATC
GAACCGACAATACCTTCGGTCCCTCTATCCCTACTACGCCCCGTCCCTCT
CATATCTCTTTCGACTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCAGGCAACGACTACGGGTGCAATGGCGGTCTCATGGACAATGCCT
TCAGCTGGGTCCAGGTGAGGAGGGAGGGAGGGAGGGAGGGACGGAAGGAG
GGAGGGAGGGAGGAAAGGTGAGGGAGAGTGAAGCTCCACATAGGGAAGGA
AGACAAGGAGGGAGGAGGGAGGGGAGGGAGGAGGGAGGGCAAAGAGGGTG
AGATAGAGGCCCTCACGCACACCCTGGTGTATGTAATGTATGTTACTGTT
ACAACATACGTAATGTATGTTACTGTTACAGCATACGTAATGTATGTTAC
TGTTACAGCATACGTAATGTATGTTACTGTTACAGCATACGTAATGTATG
TTACTGTTACAGCATACGTAATGTATGTTACTGTTACAACATACGTAATG
TATGTTACTGTTACAGCATACGTAATGTATGTTACTGTTACAGCATACGT
AATGTATGTTACTGTTACAGCATACGTAATGTATGTTACTGTTACAGCAT
ACGTAATGTATGTTACTGTTACAGCATACGTAATGTATGTTACTGTTACA
GCATACGTAATGTATGTTACTGTTACAACATACGTAATGTATGTTACTGT
TACAACATACGTAATGTATGTTACTGTTACAGCATACGTAATGTATGTTA
CTGTTACAGCATACGTAATGTATGTTACTGTTACAACATACGTAATGTAT
GTTACTGTTACAACATACGTAATGTATGTTACTGTTACAACATACGTAAT
GTATATCACACTTTAAATGTATGCAATGTATATCACCAGTAACAGGTTTG
TAATGTACATTACCGTTAAAATGTATGTAATGTACATTGTTATTAAATTA
TATGTAGCGTATGTTACTACTTAACGTATATGAACTGTATATTCTATTGA
TACAACACGACAGAACAACGGAGGCTTGACGCTGGAGAGCGACTACCCTT
ACGAAGGAACAGAGGGGAGGTGCAAGTTGAGCGTGGACCTCGTGGAGGGC
ACGGAGGTGACGGGGGAGGGAGGGAGGGCGGGAGGGAGGGCAGGCACCTT
TCTTCGTTCCCTCGACCAACATCCAGGATCCGCTTTCATTTCCCTCCCCT
TTCTGGTGTCGTCCCGCCCACCTTCCTCTCATCGCCTCCTCCACCCCATC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCCTCCCGTCCAGGTGACGG
GATACCGTGACGTGGAGGGTGGGAATGACAGTGCATTTGTGGTGGCCCTG
GCCAAGCAGCCGCTGTCGGTGGCGATCGAAGCCGACGAACGCGCGTTCCA
GGTATAGCAAGGGAAGGGAGGGAAGGGAGGGAAGGAGGGAAGGGAGGGAG
AAAGAGAGGGAAGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGGG
AGGAGGCATCGGAGGGAGAGAGAGTGGGCAGGAGGGAGGGCGAGAGGCAT
TGATGGTTCATTCAAGTGCTCACTGCATTTTGACCTGTTATCCCTCCCTC
CCCCCCTCCCTCCCTCCCTCCCTCCCCCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCCCCCTCCCTCCCTCTCTCCCCCCCTCCCTCCCTC
CCTGCCTAGTTGTACTCCTCTGGAGTGTTCTCAAGCTCCTGCGGGACCTC
CCTCGACCATGGCGTGCTGGTGAGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAAGGGGAAGATTTTGAATACGCATTGAGAGTGGAG
GAATGAAGGAGGGAGAGAGGGAGGGAGAGAGGGAGGGAAGAAGAGACGGG
CCACCAAATGTAATCATGCAAACTCTCTCTATGATCGCTATGACCCACCC
CTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTTCCTCCCT
GACAGGCCGTGGGCTACGGCACAGAGGACGGGTTGGATTTTATTAAAATC
AAGAACTCCTGGGGCGAGACGTAAGTCACTGTCTCTTCTCCCTCCCTCCC
TCTCCCTCCTTTCTTCTTTATTTGCAATGTCAACCCTGCATATCCTCACC
TACCCTCCCTCCCTCCCTCTCGTCCAGGTGGGGCGAGGATGGGTACATCC
GCCTGAAGCGTGGCGTGCGTCAGGAGGGCGGGCAATGCGGCGTGTTGATG
GCGGCTTCCTACCCCTCCGTGTAGAGCATGGAAGGGAGGGAGGGAGGGAG
GGAGGGAGGGCAATGCGGCGTGCTGATGGCGGCTTCCTACCCCTCCGTGT
AGAGCATGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGCAATGCGGCGTG
CTGATGGCGGCTTCCTACCCCTCCGTGTAGAGCATGGAAGGGAGGGAGGG
AGGGAGGGAGGGAGGACAATTTCGTGTGTTGATGGCGGCCTCCTACTTCT
TTGTGTAGAGCATGGAAGGGAGGGAGGGAGGGAG back to topCoding sequence (CDS) from alignment at scaffold_35:54537..57570- >mRNA_9314 ID=mRNA_9314|Name=jgi.p|Nanoce1779_2|606351|organism=Nannochloropsis oceanica|type=CDS|length=5319bp|location=Sequence derived from alignment at scaffold_35:54537..57570- (Nannochloropsis oceanica)
GGGCAATGCGGCGTGCTGATGGCGGCTTCCTACCCCTCCGTGTAGGTGGG
GCGAGGATGGGTACATCCGCCTGAAGCGTGGCGTGCGTCAGGAGGGCGCC
GTGGGCTACGGCACAGAGGACGGGTTGGATTTTATTAAAATCAAGAACTC
CTGGGGCGAGACTTGTACTCCTCTGGAGTGTTCTCAAGCTCCTGCGGGAC
CTCCCTCGACCATGGCGTGCTGGTGACGGGATACCGTGACGTGGAGGGTG
GGAATGACAGTGCATTTGTGGTGGCCCTGGCCAAGCAGCCGCTGTCGGTG
GCGATCGAAGCCGACGAACGCGCGTTCCAGAACAACGGAGGCTTGACGCT
GGAGAGCGACTACCCTTACGAAGGAACAGAGGGGAGGTGCAAGTTGAGCG
TGGACCTCGTGGAGGGCACGGAGGCAACGACTACGGGTGCAATGGCGGTC
TCATGGACAATGCCTTCAGCTGGGTCCAGCTCTTGCTGGGCGTTCTCCAC
CACTGGTGCCTTGGAGGGAGCCTACGCGCTCAAGACGGGCAAGCTCCTCT
CCTTTTCGGAGCAGGAGCTGGTCGACTGCGATGATGTGCGGGGGCAATGC
GGCGTGCTGATGGCGGCTTCCTACCCCTCCGTGTAGGTGGGGCGAGGATG
GGTACATCCGCCTGAAGCGTGGCGTGCGTCAGGAGGGCGCCGTGGGCTAC
GGCACAGAGGACGGGTTGGATTTTATTAAAATCAAGAACTCCTGGGGCGA
GACTTGTACTCCTCTGGAGTGTTCTCAAGCTCCTGCGGGACCTCCCTCGA
CCATGGCGTGCTGGTGACGGGATACCGTGACGTGGAGGGTGGGAATGACA
GTGCATTTGTGGTGGCCCTGGCCAAGCAGCCGCTGTCGGTGGCGATCGAA
GCCGACGAACGCGCGTTCCAGAACAACGGAGGCTTGACGCTGGAGAGCGA
CTACCCTTACGAAGGAACAGAGGGGAGGTGCAAGTTGAGCGTGGACCTCG
TGGAGGGCACGGAGGCAACGACTACGGGTGCAATGGCGGTCTCATGGACA
ATGCCTTCAGCTGGGTCCAGCTCTTGCTGGGCGTTCTCCACCACTGGTGC
CTTGGAGGGAGCCTACGCGCTCAAGACGGGCAAGCTCCTCTCCTTTTCGG
AGCAGGAGCTGGTCGACTGCGATGATGTGCGGGGGCAATGCGGCGTGCTG
ATGGCGGCTTCCTACCCCTCCGTGTAGGTGGGGCGAGGATGGGTACATCC
GCCTGAAGCGTGGCGTGCGTCAGGAGGGCGCCGTGGGCTACGGCACAGAG
GACGGGTTGGATTTTATTAAAATCAAGAACTCCTGGGGCGAGACTTGTAC
TCCTCTGGAGTGTTCTCAAGCTCCTGCGGGACCTCCCTCGACCATGGCGT
GCTGGTGACGGGATACCGTGACGTGGAGGGTGGGAATGACAGTGCATTTG
TGGTGGCCCTGGCCAAGCAGCCGCTGTCGGTGGCGATCGAAGCCGACGAA
CGCGCGTTCCAGAACAACGGAGGCTTGACGCTGGAGAGCGACTACCCTTA
CGAAGGAACAGAGGGGAGGTGCAAGTTGAGCGTGGACCTCGTGGAGGGCA
CGGAGGCAACGACTACGGGTGCAATGGCGGTCTCATGGACAATGCCTTCA
GCTGGGTCCAGCTCTTGCTGGGCGTTCTCCACCACTGGTGCCTTGGAGGG
AGCCTACGCGCTCAAGACGGGCAAGCTCCTCTCCTTTTCGGAGCAGGAGC
TGGTCGACTGCGATGATGTGCGGGGGCAATGCGGCGTGCTGATGGCGGCT
TCCTACCCCTCCGTGTAGGTGGGGCGAGGATGGGTACATCCGCCTGAAGC
GTGGCGTGCGTCAGGAGGGCGCCGTGGGCTACGGCACAGAGGACGGGTTG
GATTTTATTAAAATCAAGAACTCCTGGGGCGAGACTTGTACTCCTCTGGA
GTGTTCTCAAGCTCCTGCGGGACCTCCCTCGACCATGGCGTGCTGGTGAC
GGGATACCGTGACGTGGAGGGTGGGAATGACAGTGCATTTGTGGTGGCCC
TGGCCAAGCAGCCGCTGTCGGTGGCGATCGAAGCCGACGAACGCGCGTTC
CAGAACAACGGAGGCTTGACGCTGGAGAGCGACTACCCTTACGAAGGAAC
AGAGGGGAGGTGCAAGTTGAGCGTGGACCTCGTGGAGGGCACGGAGGCAA
CGACTACGGGTGCAATGGCGGTCTCATGGACAATGCCTTCAGCTGGGTCC
AGCTCTTGCTGGGCGTTCTCCACCACTGGTGCCTTGGAGGGAGCCTACGC
GCTCAAGACGGGCAAGCTCCTCTCCTTTTCGGAGCAGGAGCTGGTCGACT
GCGATGATGTGCGGGGGCAATGCGGCGTGCTGATGGCGGCTTCCTACCCC
TCCGTGTAGGTGGGGCGAGGATGGGTACATCCGCCTGAAGCGTGGCGTGC
GTCAGGAGGGCGCCGTGGGCTACGGCACAGAGGACGGGTTGGATTTTATT
AAAATCAAGAACTCCTGGGGCGAGACTTGTACTCCTCTGGAGTGTTCTCA
AGCTCCTGCGGGACCTCCCTCGACCATGGCGTGCTGGTGACGGGATACCG
TGACGTGGAGGGTGGGAATGACAGTGCATTTGTGGTGGCCCTGGCCAAGC
AGCCGCTGTCGGTGGCGATCGAAGCCGACGAACGCGCGTTCCAGAACAAC
GGAGGCTTGACGCTGGAGAGCGACTACCCTTACGAAGGAACAGAGGGGAG
GTGCAAGTTGAGCGTGGACCTCGTGGAGGGCACGGAGGCAACGACTACGG
GTGCAATGGCGGTCTCATGGACAATGCCTTCAGCTGGGTCCAGCTCTTGC
TGGGCGTTCTCCACCACTGGTGCCTTGGAGGGAGCCTACGCGCTCAAGAC
GGGCAAGCTCCTCTCCTTTTCGGAGCAGGAGCTGGTCGACTGCGATGATG
TGCGGGGGCAATGCGGCGTGCTGATGGCGGCTTCCTACCCCTCCGTGTAG
GTGGGGCGAGGATGGGTACATCCGCCTGAAGCGTGGCGTGCGTCAGGAGG
GCGCCGTGGGCTACGGCACAGAGGACGGGTTGGATTTTATTAAAATCAAG
AACTCCTGGGGCGAGACTTGTACTCCTCTGGAGTGTTCTCAAGCTCCTGC
GGGACCTCCCTCGACCATGGCGTGCTGGTGACGGGATACCGTGACGTGGA
GGGTGGGAATGACAGTGCATTTGTGGTGGCCCTGGCCAAGCAGCCGCTGT
CGGTGGCGATCGAAGCCGACGAACGCGCGTTCCAGAACAACGGAGGCTTG
ACGCTGGAGAGCGACTACCCTTACGAAGGAACAGAGGGGAGGTGCAAGTT
GAGCGTGGACCTCGTGGAGGGCACGGAGGCAACGACTACGGGTGCAATGG
CGGTCTCATGGACAATGCCTTCAGCTGGGTCCAGCTCTTGCTGGGCGTTC
TCCACCACTGGTGCCTTGGAGGGAGCCTACGCGCTCAAGACGGGCAAGCT
CCTCTCCTTTTCGGAGCAGGAGCTGGTCGACTGCGATGATGTGCGGGGGC
AATGCGGCGTGCTGATGGCGGCTTCCTACCCCTCCGTGTAGGTGGGGCGA
GGATGGGTACATCCGCCTGAAGCGTGGCGTGCGTCAGGAGGGCGCCGTGG
GCTACGGCACAGAGGACGGGTTGGATTTTATTAAAATCAAGAACTCCTGG
GGCGAGACTTGTACTCCTCTGGAGTGTTCTCAAGCTCCTGCGGGACCTCC
CTCGACCATGGCGTGCTGGTGACGGGATACCGTGACGTGGAGGGTGGGAA
TGACAGTGCATTTGTGGTGGCCCTGGCCAAGCAGCCGCTGTCGGTGGCGA
TCGAAGCCGACGAACGCGCGTTCCAGAACAACGGAGGCTTGACGCTGGAG
AGCGACTACCCTTACGAAGGAACAGAGGGGAGGTGCAAGTTGAGCGTGGA
CCTCGTGGAGGGCACGGAGGCAACGACTACGGGTGCAATGGCGGTCTCAT
GGACAATGCCTTCAGCTGGGTCCAGCTCTTGCTGGGCGTTCTCCACCACT
GGTGCCTTGGAGGGAGCCTACGCGCTCAAGACGGGCAAGCTCCTCTCCTT
TTCGGAGCAGGAGCTGGTCGACTGCGATGATGTGCGGGGGCAATGCGGCG
TGCTGATGGCGGCTTCCTACCCCTCCGTGTAGGTGGGGCGAGGATGGGTA
CATCCGCCTGAAGCGTGGCGTGCGTCAGGAGGGCGCCGTGGGCTACGGCA
CAGAGGACGGGTTGGATTTTATTAAAATCAAGAACTCCTGGGGCGAGACT
TGTACTCCTCTGGAGTGTTCTCAAGCTCCTGCGGGACCTCCCTCGACCAT
GGCGTGCTGGTGACGGGATACCGTGACGTGGAGGGTGGGAATGACAGTGC
ATTTGTGGTGGCCCTGGCCAAGCAGCCGCTGTCGGTGGCGATCGAAGCCG
ACGAACGCGCGTTCCAGAACAACGGAGGCTTGACGCTGGAGAGCGACTAC
CCTTACGAAGGAACAGAGGGGAGGTGCAAGTTGAGCGTGGACCTCGTGGA
GGGCACGGAGGCAACGACTACGGGTGCAATGGCGGTCTCATGGACAATGC
CTTCAGCTGGGTCCAGCTCTTGCTGGGCGTTCTCCACCACTGGTGCCTTG
GAGGGAGCCTACGCGCTCAAGACGGGCAAGCTCCTCTCCTTTTCGGAGCA
GGAGCTGGTCGACTGCGATGATGTGCGGGGGCAATGCGGCGTGCTGATGG
CGGCTTCCTACCCCTCCGTGTAGGTGGGGCGAGGATGGGTACATCCGCCT
GAAGCGTGGCGTGCGTCAGGAGGGCGCCGTGGGCTACGGCACAGAGGACG
GGTTGGATTTTATTAAAATCAAGAACTCCTGGGGCGAGACTTGTACTCCT
CTGGAGTGTTCTCAAGCTCCTGCGGGACCTCCCTCGACCATGGCGTGCTG
GTGACGGGATACCGTGACGTGGAGGGTGGGAATGACAGTGCATTTGTGGT
GGCCCTGGCCAAGCAGCCGCTGTCGGTGGCGATCGAAGCCGACGAACGCG
CGTTCCAGAACAACGGAGGCTTGACGCTGGAGAGCGACTACCCTTACGAA
GGAACAGAGGGGAGGTGCAAGTTGAGCGTGGACCTCGTGGAGGGCACGGA
GGCAACGACTACGGGTGCAATGGCGGTCTCATGGACAATGCCTTCAGCTG
GGTCCAGCTCTTGCTGGGCGTTCTCCACCACTGGTGCCTTGGAGGGAGCC
TACGCGCTCAAGACGGGCAAGCTCCTCTCCTTTTCGGAGCAGGAGCTGGT
CGACTGCGATGATGTGCGG back to top
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