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Properties
| Property Name | Value |
|---|
| TranscriptId | 606395 |
| Track | FilteredModels2 |
| ProteinId | 606309 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_35 | supercontig | scaffold_35:29289..31451 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9302 ID=mRNA_9302|Name=jgi.p|Nanoce1779_2|606309|organism=Nannochloropsis oceanica|type=mRNA|length=1716bp
ACAGAGCCAGCTGGACCAGCTGCATATTCCTAACGGCGGCTACTCATTAG
TCGCCTTGCAAAATTTTCATCCTCCTGCTGCTCAACAGGGGGCCCTCCAT
CGTCGCCGCCTCCTTCAGGTCACGCTGCCATCATCATCACAGCATGATGC
CCGCACCTGCCCCCTCATCGACGTCAACAACTACCGCAGACAAACCCCTT
CTGCCGCTCGCACTGGTGGTTGGCGGAACAGGCCTTCAGGGAGCTGGCTG
CCTCCAGGATTTACGAAGCAGTGGTCGCTTCCGCATGCGCACCATCACGC
GGAACGCGAGAAGCAAGCCCGCCGTGGCACTCGCAGCCCAGGGGGTTGAG
CTCTATCAAGGCACGCTGCTTGACCGTCCTTTTTTAGACAAGGCCATGGC
AGGGGTTGATGTCCTCTTCTTGGCCACCTTTTCGGACCACGATGGTACGG
AACTCCGGCAAGGCAAGAATTTGGGGAATGCAGCGGTTGCCGCGGGTGTG
CAGCGCGTCGTATTTTCGGGTGGGGAGCGCATTGGCGTAGATACAATGGA
CAACAAGATCAAGATTGAGGAATACCTGCGGACGCTGCCATTGCCCCATG
TCGTGTACCTTCACACTGCCTTTTTCTTTGAAAACGTGGCGACCAAGCGG
GGGACGAAGCGTGTACGTGTCACTCGTGATCCTCGACAGGGCCACATCAC
CCAGTACACGTTCTCCATCCCTTTGTTACAAGACATGCGCATTCCCTTTA
TTTCCCCGACGGATATTGGTCGGGTCGCGGCTACCGTCCTGCTGGCTCCG
ATCACTCAATTCCCTTCTGGGAGCATTTTGCCTATTGCCGGAGATGTGCT
ATCTCCTCGAGAATTTGTCTCCGCCGTGGCTAGATTGACGGGTGCCAAGG
CCACATATACCCAGCTATCGCTGGATTTCTTTCGACGTTTGCCCATTCCG
GGGGCAGAACTCATCGTCCAGATGTACGAGTGGTACCACGCAGGCTGTCC
GGGGGAAGGGCATTCACGTGATCCTGCCGCCACACGGGCGTTGTGCACAC
ATGTGCGGAATGTGGAGGAATGGCTGCAGAGCGATGGCCTGGCCTTGATC
GATCGGATGGCGTATGAGGAGGGGTGGGGGAGTTGGATGCATGACGGACT
ACTGTGGGGGATGACTCACGTGTATGGGACATATATGAGATTGAAAGGCT
TCGTTGAGAGAGGGTATCAATGGAGAGGAGAAGCGGATGGACAGATAAGT
AGTAACGAATAATTGAATAAATAATATGCGGGCGCGTCCAATTGCTTGTC
AGTATCGTAAAAAGCTACCCGTAAATTAAGCTGTAAAAAGAGGCGCAAGC
GGACGATTTGATTCAAGTACACCCTCATGCGAAGGAGCTTGTATATGAGC
GAGAATAATTCTTGCAGTGCAATATTCTTCATTTGTCGTTGTTTGTCGTC
TTGCCTCGTCAACAACACAAGTCATCATCATCATCACTTCTCTGTCTGTC
ACTGTCTCTGCCTCTGTTTGTCTTTGTCTCCTACATCTATGTCTATTCCT
CTCGCTGGGTGACTCCTCCCCCCTTCAGTGAATCAAAGATACTGTGATTA
TCCCTTTTCCTCCGCTTGTGACACCTGCCTGTGCCTTCTTCCGTCCTTCT
ATTCTTACCCTCCACTTGTCCCTCTTTTTGTTCTTGTTCTTGTTCTTCTT
CTTCTTCTTCTTCTTT back to topprotein sequence of jgi.p|Nanoce1779_2|606309 >mRNA_9302-protein ID=mRNA_9302-protein|Name=jgi.p|Nanoce1779_2|606309|organism=Nannochloropsis oceanica|type=polypeptide|length=373bp
MMPAPAPSSTSTTTADKPLLPLALVVGGTGLQGAGCLQDLRSSGRFRMRT
ITRNARSKPAVALAAQGVELYQGTLLDRPFLDKAMAGVDVLFLATFSDHD
GTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDTMDNKIKIEEYLRTLPL
PHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRI
PFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTG
AKATYTQLSLDFFRRLPIPGAELIVQMYEWYHAGCPGEGHSRDPAATRAL
CTHVRNVEEWLQSDGLALIDRMAYEEGWGSWMHDGLLWGMTHVYGTYMRL
KGFVERGYQWRGEADGQISSNE* back to topmRNA from alignment at scaffold_35:29289..31451- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9302 ID=mRNA_9302|Name=jgi.p|Nanoce1779_2|606309|organism=Nannochloropsis oceanica|type=mRNA|length=2163bp|location=Sequence derived from alignment at scaffold_35:29289..31451- (Nannochloropsis oceanica)
ACAGAGCCAGCTGGACCAGCTGCATATTCCTAACGGCGGCTACTCATTAG
TCGCCTTGCAAAATTTTCATCCTCCTGCTGCTCAACAGGGGGCCCTCCAT
CGTCGCCGCCTCCTTCAGGTCACGCTGCCATCATCATCACAGCATGATGC
CCGCACCTGCCCCCTCATCGACGTCAACAACTACCGCAGACAAACCCCTT
CTGCCGCTCGCACTGGTGGTTGGCGGAACAGGCCTTCAGGGAGCTGGCTG
CCTCCAGGATTTACGAAGCAGTGGTCGCTTCCGCATGCGCACCATCACGC
GGAACGCGAGAAGCAAGGTGCGTGAACATGCGTGATGTGGCCCCATCGTC
TTGAAGTACCTCTAGTCACTTCCCTGCTTCCACAACATATCCTTCTTCGT
CTGTCACCAACATGAATTCCTTGCCGCGCATACAATGAACGTATTTGCTC
GTACATTCTTACCCTTCATCACCTCCATCCCCCACCCACTCTATTCCTTC
CAACCCTCACCCACAGCCCGCCGTGGCACTCGCAGCCCAGGGGGTTGAGC
TCTATCAAGGCACGCTGCTTGACCGTCCTTTTTTAGACAAGGCCATGGCA
GGGGTTGATGTCCTCTTCTTGGCCACCTTTTCGGACCACGATGGTACGGA
ACTCCGGCAAGGCAAGAATTTGGGGAATGCAGCGGTTGCCGCGGGTGTGC
AGCGCGTCGTATTTTCGGGTGGGGAGCGCATTGGCGTAGATACAATGGAC
AACAAGATCAAGATTGAGGAATACCTGCGGACGCTGCCATTGCCCCATGT
CGTGTACCTTCACACTGCCTTTTTCTTTGAAAACGTGGCGACCAAGCGGG
GGACGAAGCGTGTACGTGTCACTCGTGATCCTCGACAGGGCCACATCACC
CAGTACACGTTCTCCATCCCTTTGTTACAAGACATGCGCATTCCCTTTAT
TTCCCCGACGGATATTGGTCGGGTCGCGGCTACCGTCCTGCTGGCTCCGA
TCACTCAATTCCCTTCTGGGAGCATTTTGCCTATTGCCGGAGATGTGCTA
TCTCCTCGAGAATTTGTCTCCGCCGTGGCTAGATTGACGGGTGCCAAGGC
CACATATACCCAGCTATCGCTGGATTTCTTTCGACGTTTGCCCATTCCGG
GGGCAGAACTCATGTATGTAGTGGATAGGCGAAGGGGAGGATGGGGAAGG
AGCTTGTAAAAGAGCGGGATGAGACCATGTATGGAATTCTGATCCCACCG
CTGCTGCTGCTCCTGCCGCCGCTACGATTGGTGCTGCTGTTGAAGCCATT
ACACCATGTTGACTGTCATGCGCATAACTAGAGAGCGGACATCAATACCT
TCGAACCGACTCAATCCTCCATCCCCTTCCCCTCCCCTTTCCCTCCTCTC
CACAAACCCAGCGTCCAGATGTACGAGTGGTACCACGCAGGCTGTCCGGG
GGAAGGGCATTCACGTGATCCTGCCGCCACACGGGCGTTGTGCACACATG
TGCGGAATGTGGAGGAATGGCTGCAGAGCGATGGCCTGGCCTTGATCGAT
CGGATGGCGTATGAGGAGGGGTGGGGGAGTTGGATGCATGACGGACTACT
GTGGGGGATGACTCACGTGTATGGGACATATATGAGATTGAAAGGCTTCG
TTGAGAGAGGGTATCAATGGAGAGGAGAAGCGGATGGACAGATAAGTAGT
AACGAATAATTGAATAAATAATATGCGGGCGCGTCCAATTGCTTGTCAGT
ATCGTAAAAAGCTACCCGTAAATTAAGCTGTAAAAAGAGGCGCAAGCGGA
CGATTTGATTCAAGTACACCCTCATGCGAAGGAGCTTGTATATGAGCGAG
AATAATTCTTGCAGTGCAATATTCTTCATTTGTCGTTGTTTGTCGTCTTG
CCTCGTCAACAACACAAGTCATCATCATCATCACTTCTCTGTCTGTCACT
GTCTCTGCCTCTGTTTGTCTTTGTCTCCTACATCTATGTCTATTCCTCTC
GCTGGGTGACTCCTCCCCCCTTCAGTGAATCAAAGATACTGTGATTATCC
CTTTTCCTCCGCTTGTGACACCTGCCTGTGCCTTCTTCCGTCCTTCTATT
CTTACCCTCCACTTGTCCCTCTTTTTGTTCTTGTTCTTGTTCTTCTTCTT
CTTCTTCTTCTTT back to topCoding sequence (CDS) from alignment at scaffold_35:29289..31451- >mRNA_9302 ID=mRNA_9302|Name=jgi.p|Nanoce1779_2|606309|organism=Nannochloropsis oceanica|type=CDS|length=3357bp|location=Sequence derived from alignment at scaffold_35:29289..31451- (Nannochloropsis oceanica)
CGTCCAGATGTACGAGTGGTACCACGCAGGCTGTCCGGGGGAAGGGCATT
CACGTGATCCTGCCGCCACACGGGCGTTGTGCACACATGTGCGGAATGTG
GAGGAATGGCTGCAGAGCGATGGCCTGGCCTTGATCGATCGGATGGCGTA
TGAGGAGGGGTGGGGGAGTTGGATGCATGACGGACTACTGTGGGGGATGA
CTCACGTGTATGGGACATATATGAGATTGAAAGGCTTCGTTGAGAGAGGG
TATCAATGGAGAGGAGAAGCGGATGGACAGATAAGTAGTAACGAATAACC
CGCCGTGGCACTCGCAGCCCAGGGGGTTGAGCTCTATCAAGGCACGCTGC
TTGACCGTCCTTTTTTAGACAAGGCCATGGCAGGGGTTGATGTCCTCTTC
TTGGCCACCTTTTCGGACCACGATGGTACGGAACTCCGGCAAGGCAAGAA
TTTGGGGAATGCAGCGGTTGCCGCGGGTGTGCAGCGCGTCGTATTTTCGG
GTGGGGAGCGCATTGGCGTAGATACAATGGACAACAAGATCAAGATTGAG
GAATACCTGCGGACGCTGCCATTGCCCCATGTCGTGTACCTTCACACTGC
CTTTTTCTTTGAAAACGTGGCGACCAAGCGGGGGACGAAGCGTGTACGTG
TCACTCGTGATCCTCGACAGGGCCACATCACCCAGTACACGTTCTCCATC
CCTTTGTTACAAGACATGCGCATTCCCTTTATTTCCCCGACGGATATTGG
TCGGGTCGCGGCTACCGTCCTGCTGGCTCCGATCACTCAATTCCCTTCTG
GGAGCATTTTGCCTATTGCCGGAGATGTGCTATCTCCTCGAGAATTTGTC
TCCGCCGTGGCTAGATTGACGGGTGCCAAGGCCACATATACCCAGCTATC
GCTGGATTTCTTTCGACGTTTGCCCATTCCGGGGGCAGAACTCATATGAT
GCCCGCACCTGCCCCCTCATCGACGTCAACAACTACCGCAGACAAACCCC
TTCTGCCGCTCGCACTGGTGGTTGGCGGAACAGGCCTTCAGGGAGCTGGC
TGCCTCCAGGATTTACGAAGCAGTGGTCGCTTCCGCATGCGCACCATCAC
GCGGAACGCGAGAAGCAAGCGTCCAGATGTACGAGTGGTACCACGCAGGC
TGTCCGGGGGAAGGGCATTCACGTGATCCTGCCGCCACACGGGCGTTGTG
CACACATGTGCGGAATGTGGAGGAATGGCTGCAGAGCGATGGCCTGGCCT
TGATCGATCGGATGGCGTATGAGGAGGGGTGGGGGAGTTGGATGCATGAC
GGACTACTGTGGGGGATGACTCACGTGTATGGGACATATATGAGATTGAA
AGGCTTCGTTGAGAGAGGGTATCAATGGAGAGGAGAAGCGGATGGACAGA
TAAGTAGTAACGAATAACCCGCCGTGGCACTCGCAGCCCAGGGGGTTGAG
CTCTATCAAGGCACGCTGCTTGACCGTCCTTTTTTAGACAAGGCCATGGC
AGGGGTTGATGTCCTCTTCTTGGCCACCTTTTCGGACCACGATGGTACGG
AACTCCGGCAAGGCAAGAATTTGGGGAATGCAGCGGTTGCCGCGGGTGTG
CAGCGCGTCGTATTTTCGGGTGGGGAGCGCATTGGCGTAGATACAATGGA
CAACAAGATCAAGATTGAGGAATACCTGCGGACGCTGCCATTGCCCCATG
TCGTGTACCTTCACACTGCCTTTTTCTTTGAAAACGTGGCGACCAAGCGG
GGGACGAAGCGTGTACGTGTCACTCGTGATCCTCGACAGGGCCACATCAC
CCAGTACACGTTCTCCATCCCTTTGTTACAAGACATGCGCATTCCCTTTA
TTTCCCCGACGGATATTGGTCGGGTCGCGGCTACCGTCCTGCTGGCTCCG
ATCACTCAATTCCCTTCTGGGAGCATTTTGCCTATTGCCGGAGATGTGCT
ATCTCCTCGAGAATTTGTCTCCGCCGTGGCTAGATTGACGGGTGCCAAGG
CCACATATACCCAGCTATCGCTGGATTTCTTTCGACGTTTGCCCATTCCG
GGGGCAGAACTCATATGATGCCCGCACCTGCCCCCTCATCGACGTCAACA
ACTACCGCAGACAAACCCCTTCTGCCGCTCGCACTGGTGGTTGGCGGAAC
AGGCCTTCAGGGAGCTGGCTGCCTCCAGGATTTACGAAGCAGTGGTCGCT
TCCGCATGCGCACCATCACGCGGAACGCGAGAAGCAAGCGTCCAGATGTA
CGAGTGGTACCACGCAGGCTGTCCGGGGGAAGGGCATTCACGTGATCCTG
CCGCCACACGGGCGTTGTGCACACATGTGCGGAATGTGGAGGAATGGCTG
CAGAGCGATGGCCTGGCCTTGATCGATCGGATGGCGTATGAGGAGGGGTG
GGGGAGTTGGATGCATGACGGACTACTGTGGGGGATGACTCACGTGTATG
GGACATATATGAGATTGAAAGGCTTCGTTGAGAGAGGGTATCAATGGAGA
GGAGAAGCGGATGGACAGATAAGTAGTAACGAATAACCCGCCGTGGCACT
CGCAGCCCAGGGGGTTGAGCTCTATCAAGGCACGCTGCTTGACCGTCCTT
TTTTAGACAAGGCCATGGCAGGGGTTGATGTCCTCTTCTTGGCCACCTTT
TCGGACCACGATGGTACGGAACTCCGGCAAGGCAAGAATTTGGGGAATGC
AGCGGTTGCCGCGGGTGTGCAGCGCGTCGTATTTTCGGGTGGGGAGCGCA
TTGGCGTAGATACAATGGACAACAAGATCAAGATTGAGGAATACCTGCGG
ACGCTGCCATTGCCCCATGTCGTGTACCTTCACACTGCCTTTTTCTTTGA
AAACGTGGCGACCAAGCGGGGGACGAAGCGTGTACGTGTCACTCGTGATC
CTCGACAGGGCCACATCACCCAGTACACGTTCTCCATCCCTTTGTTACAA
GACATGCGCATTCCCTTTATTTCCCCGACGGATATTGGTCGGGTCGCGGC
TACCGTCCTGCTGGCTCCGATCACTCAATTCCCTTCTGGGAGCATTTTGC
CTATTGCCGGAGATGTGCTATCTCCTCGAGAATTTGTCTCCGCCGTGGCT
AGATTGACGGGTGCCAAGGCCACATATACCCAGCTATCGCTGGATTTCTT
TCGACGTTTGCCCATTCCGGGGGCAGAACTCATATGATGCCCGCACCTGC
CCCCTCATCGACGTCAACAACTACCGCAGACAAACCCCTTCTGCCGCTCG
CACTGGTGGTTGGCGGAACAGGCCTTCAGGGAGCTGGCTGCCTCCAGGAT
TTACGAAGCAGTGGTCGCTTCCGCATGCGCACCATCACGCGGAACGCGAG
AAGCAAG back to top
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