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Properties
| Property Name | Value |
|---|
| TranscriptId | 659083 |
| Track | FilteredModels2 |
| ProteinId | 658997 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_35 | supercontig | scaffold_35:7131..8651 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9294 ID=mRNA_9294|Name=jgi.p|Nanoce1779_2|658997|organism=Nannochloropsis oceanica|type=mRNA|length=1521bp
TCATGTGTATTTAATCTCCAGGTGACCTTTCGCGGTTAAATAGATCGTTA
TCCACAATGACCCTAACCTTATGCAAGCGTGGAATGATCGTAGCTGTCCC
CCAGCCCTTTTCTTTCTCTACCTCCTCTACCCTTCAGACTACAACTTTGC
TTCTCATTTCATCTATTAAGAGTGCTTTTCGGTTGGAGCAACTCCCTCAT
TCTACTTACGTATATACTCGTTCTCACCCCCTTAAAGTCTAAGCTGCTTC
GTTCCCATGGAAAATTAAGTTACGTGCCTGTCGTGTTGCTCTTATGCGTG
TTTCTGCTTGGTGGTGGTGTAATGTGTTGAGCATGGCCTTACCCCAGGCG
ATCCCACGCATTGAATCAGTCAGGCAGGTTGGCCCCATTTATCACCTTCT
TATTGTTGTTACTGGCCTTCCAAAAATGCATGTGTGGTTGTGATGGCATG
CTTTACATACCCATCTTATACCTCCCTGGGAAGTTGATGAAATGGAAAAA
AGACGAGACGAAGGGGGCGGTCCCTCGTGACTCACACGGTGCATTCATGC
TTATCTCCCTTGTTCTGATCCTTACAGCGCCCGTCTCTCTCTCCCGTCCA
TCGAGCGAACAAGAGAAAAACATGTCACAGGTCTTCCTCTCTCTTTTCTC
TCGGTTGTTCTCGCTCAATCTCTCTTTCGCTCGGTGTTTTTCGCCCTGCC
CCTCCCCCCCCAATTGGGGCACATCCGACTCCTTCTCTCTTGCTTTATTG
GAGTCCCAACGCCAGAATACTATTTACTCTGATCTCCCTCCATTCTGCCT
CTTCTCTCCACCCTCCCTTTGCCTATCCTCTCTTCGAGTCAGTCGAAAAA
CACTCCTACCGATACTTGACATGTTCATCTTACAAAACTTATCCTCTGCC
TTCCTTGCCCCGCGTACAAAATGGCTCTCCCTCCCTCCCTTCCTCAATCA
ATCAATCAAACCATTCACATCCTCCTCTCCCTTTATCCTTCCTTCCTTCC
TATCTCCTTTTCTAGAGCTACACCCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTTTTTTCTCTCCTCCCCCTATTC
GCCCTGCCTCTTCTCTCTCCTGCTGCTGCTGCTGCCGGTGACACACACAT
CCAACCACACTTGGCCCATGCGCCCCAGCCCAACACATTCCTCGCTCCTC
CCCTTCCCCCCCTCCCCCCCCTCCTTCCCCCACCTCGACCGGAATCAGTC
GAATTCGGAGATATCCCAAACGGATAATGACGCAACTCTCCGCTCCGGGG
GCTGAAGAAACTCGTCGTCCAACCCTCGCTTCCCCCACTCCCGGCACCCC
CTCCTCCCTCCCTTCCTCCCACTGACTCCACATTGACGTTGATCGGGATG
GCGACCGGACCTTCCATCCCCTTTTGCCCGCCTTCACCTCCTCCGCCCCC
CACTTCTCCTCCTCCGCCCCCCACTCCTCCTCCACGTTCCGGAGATGGTG
AGTCAAGATGGAGGGAACCAT back to topprotein sequence of jgi.p|Nanoce1779_2|658997 >mRNA_9294-protein ID=mRNA_9294-protein|Name=jgi.p|Nanoce1779_2|658997|organism=Nannochloropsis oceanica|type=polypeptide|length=292bp
MCGCDGMLYIPILYLPGKLMKWKKDETKGAVPRDSHGAFMLISLVLILTA
PVSLSRPSSEQEKNMSQVFLSLFSRLFSLNLSFARCFSPCPSPPNWGTSD
SFSLALLESQRQNTIYSDLPPFCLFSPPSLCLSSLRVSRKTLLPILDMFI
LQNLSSAFLAPRTKWLSLPPFLNQSIKPFTSSSPFILPSFLSPFLELHPS
SSSSSSSSSSSSSSSSFFLSSPYSPCLFSLLLLLLPVTHTSNHTWPMRPS
PTHSSLLPFPPSPPSFPHLDRNQSNSEISQTDNDATLRSGG* back to topmRNA from alignment at scaffold_35:7131..8651+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9294 ID=mRNA_9294|Name=jgi.p|Nanoce1779_2|658997|organism=Nannochloropsis oceanica|type=mRNA|length=1521bp|location=Sequence derived from alignment at scaffold_35:7131..8651+ (Nannochloropsis oceanica)
TCATGTGTATTTAATCTCCAGGTGACCTTTCGCGGTTAAATAGATCGTTA
TCCACAATGACCCTAACCTTATGCAAGCGTGGAATGATCGTAGCTGTCCC
CCAGCCCTTTTCTTTCTCTACCTCCTCTACCCTTCAGACTACAACTTTGC
TTCTCATTTCATCTATTAAGAGTGCTTTTCGGTTGGAGCAACTCCCTCAT
TCTACTTACGTATATACTCGTTCTCACCCCCTTAAAGTCTAAGCTGCTTC
GTTCCCATGGAAAATTAAGTTACGTGCCTGTCGTGTTGCTCTTATGCGTG
TTTCTGCTTGGTGGTGGTGTAATGTGTTGAGCATGGCCTTACCCCAGGCG
ATCCCACGCATTGAATCAGTCAGGCAGGTTGGCCCCATTTATCACCTTCT
TATTGTTGTTACTGGCCTTCCAAAAATGCATGTGTGGTTGTGATGGCATG
CTTTACATACCCATCTTATACCTCCCTGGGAAGTTGATGAAATGGAAAAA
AGACGAGACGAAGGGGGCGGTCCCTCGTGACTCACACGGTGCATTCATGC
TTATCTCCCTTGTTCTGATCCTTACAGCGCCCGTCTCTCTCTCCCGTCCA
TCGAGCGAACAAGAGAAAAACATGTCACAGGTCTTCCTCTCTCTTTTCTC
TCGGTTGTTCTCGCTCAATCTCTCTTTCGCTCGGTGTTTTTCGCCCTGCC
CCTCCCCCCCCAATTGGGGCACATCCGACTCCTTCTCTCTTGCTTTATTG
GAGTCCCAACGCCAGAATACTATTTACTCTGATCTCCCTCCATTCTGCCT
CTTCTCTCCACCCTCCCTTTGCCTATCCTCTCTTCGAGTCAGTCGAAAAA
CACTCCTACCGATACTTGACATGTTCATCTTACAAAACTTATCCTCTGCC
TTCCTTGCCCCGCGTACAAAATGGCTCTCCCTCCCTCCCTTCCTCAATCA
ATCAATCAAACCATTCACATCCTCCTCTCCCTTTATCCTTCCTTCCTTCC
TATCTCCTTTTCTAGAGCTACACCCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTTTTTTCTCTCCTCCCCCTATTC
GCCCTGCCTCTTCTCTCTCCTGCTGCTGCTGCTGCCGGTGACACACACAT
CCAACCACACTTGGCCCATGCGCCCCAGCCCAACACATTCCTCGCTCCTC
CCCTTCCCCCCCTCCCCCCCCTCCTTCCCCCACCTCGACCGGAATCAGTC
GAATTCGGAGATATCCCAAACGGATAATGACGCAACTCTCCGCTCCGGGG
GCTGAAGAAACTCGTCGTCCAACCCTCGCTTCCCCCACTCCCGGCACCCC
CTCCTCCCTCCCTTCCTCCCACTGACTCCACATTGACGTTGATCGGGATG
GCGACCGGACCTTCCATCCCCTTTTGCCCGCCTTCACCTCCTCCGCCCCC
CACTTCTCCTCCTCCGCCCCCCACTCCTCCTCCACGTTCCGGAGATGGTG
AGTCAAGATGGAGGGAACCAT back to topCoding sequence (CDS) from alignment at scaffold_35:7131..8651+ >mRNA_9294 ID=mRNA_9294|Name=jgi.p|Nanoce1779_2|658997|organism=Nannochloropsis oceanica|type=CDS|length=876bp|location=Sequence derived from alignment at scaffold_35:7131..8651+ (Nannochloropsis oceanica)
ATGTGTGGTTGTGATGGCATGCTTTACATACCCATCTTATACCTCCCTGG
GAAGTTGATGAAATGGAAAAAAGACGAGACGAAGGGGGCGGTCCCTCGTG
ACTCACACGGTGCATTCATGCTTATCTCCCTTGTTCTGATCCTTACAGCG
CCCGTCTCTCTCTCCCGTCCATCGAGCGAACAAGAGAAAAACATGTCACA
GGTCTTCCTCTCTCTTTTCTCTCGGTTGTTCTCGCTCAATCTCTCTTTCG
CTCGGTGTTTTTCGCCCTGCCCCTCCCCCCCCAATTGGGGCACATCCGAC
TCCTTCTCTCTTGCTTTATTGGAGTCCCAACGCCAGAATACTATTTACTC
TGATCTCCCTCCATTCTGCCTCTTCTCTCCACCCTCCCTTTGCCTATCCT
CTCTTCGAGTCAGTCGAAAAACACTCCTACCGATACTTGACATGTTCATC
TTACAAAACTTATCCTCTGCCTTCCTTGCCCCGCGTACAAAATGGCTCTC
CCTCCCTCCCTTCCTCAATCAATCAATCAAACCATTCACATCCTCCTCTC
CCTTTATCCTTCCTTCCTTCCTATCTCCTTTTCTAGAGCTACACCCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTT
TTTTCTCTCCTCCCCCTATTCGCCCTGCCTCTTCTCTCTCCTGCTGCTGC
TGCTGCCGGTGACACACACATCCAACCACACTTGGCCCATGCGCCCCAGC
CCAACACATTCCTCGCTCCTCCCCTTCCCCCCCTCCCCCCCCTCCTTCCC
CCACCTCGACCGGAATCAGTCGAATTCGGAGATATCCCAAACGGATAATG
ACGCAACTCTCCGCTCCGGGGGCTGA back to top
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