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Properties
| Property Name | Value |
|---|
| TranscriptId | 574775 |
| Track | FilteredModels2 |
| ProteinId | 574689 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:769970..772723 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_927 ID=mRNA_927|Name=jgi.p|Nanoce1779_2|574689|organism=Nannochloropsis oceanica|type=mRNA|length=2600bp
GCGCCCGAGGCCGACCTTACCTGGGGGCTACGAATACATAGAGCACTGTC
TTGTGCTTCTTCTACTGTCGCACAGGAGCCCATAAGGCCCTTTCCTCCAT
CAACAGAAGGGGTTTAGCTGCGAGCGCGCTCGCCTGCTCGCCAACCTCAC
TCTCTCTCAAACATCACACATTCACATATTTACGGAGAAATGCCTAGACG
CCATGGGGGAGGAAGCGGGTCATATTATGACGAGGAAAAGGCAGCGCAGA
GTCCTCATGCTCTACTGCAAGCTCCCTTGCTCCTCCGGATGGAGCAGGGG
AATGACGAGGAGGAGCATAACGGCTTGGAGAGGGATCAGGAGATTGCAAG
AGTACCAAGTTGCGGTGCCAGCACAGCTCAATGTCTCATTTGGGCGCGGC
GAAAACTTTTGGGATATGTCGTATTACTGCTGCTTGGCCTTGTTTTGGGT
TTGGCATTGCCTAAGAATAAGCAGCTTCAGCACGACCCTGCCTCTGCCGC
TCTCTCCAATATTCTGGGATGGACGTACTTCCTGGCCTGGACTGTCAGTT
TCTATCCGCAACTTCTTCTTAACTACCGGCAGCAAACTACTGAAGGACTT
TCCCTGGACTTTGAACTCCTGAATTTTCTGGGCTTCTTATTCTATACGGC
TTTTGCACTGGCTCTCCAGACGGCCCCTTCCATCCAGCAAGCGTATCGAA
ATCAGAACGATGGCCACGAAAACAAAGTGACGATCCAGGACGTGGTCTTT
GCGGGGCACGCCGTCCTCATAACTGCTGTAACTATCGCTCAAATGTTCTA
TTACGATGGCTTTGATCCAAAAAGAAAGCGACTTTCGAGGCCCATCTCCC
TGGTCGTGCTTGGATTGCTTGCCACCACCGTATTGGCTTTGACTGTCGCA
GGCGCGCGGGGAGCTAAGCCGTCGGACTGGCTTGATTTTTTGTACATTTT
GTCATATATGAAGCTCTTTATTACAATCATTAAAGGCATACCTCAAGCAT
ACTTAAACTATATACGCAAATCCACCTCGGGCTGGTCGATTCACAACATA
TTGTGCGACTTCACAGGCGGCCTCTTTTCGGTGATGCAACTTGTGGTGGA
CTGCCAAGTGACGAACGATTGGAAGGGTATCAATGGCGACCTTCTCAAGT
TCTTTTTAGGGCTGTTCTCCATGGCCTTCGATGTATTTTTCATCGTCCAG
CATTTTATCCTTTACCCCTCGCCTCACGCTGCAAAGGCACGACCGAAGTC
AGCCCATGAGCCTCGGCGGCGAGGGCGAGGAGGAGAAGTCGCGGTACAAG
ACTAGGAGAGTCAGACGGACGTTTTCACGCATCTCCACACGTGAAAATAT
TTGAATTGGTTTATGTACATGTGCAAAAATCACTACTGTCCGGCCGCGGC
AAGAAATCTCGTGAGCAGCAGCTGCTCTACTGAGAGCAGTGTGTAGATAG
GAATTGACATAAATGTACAGCAGAAACAGGCACACTGGCTTCCAGGCTGG
TTTCTTGGCGACGTTGAAGAAAGAACAAATGTCAATTACAAGTTAGAATT
AGTAGCAAGGAAGCTCGAGCGGGTGCGATACTCGGATGCCTGCACTTACA
TGCGTAATATCTTTTCCTCAACTTTGAAAGCCTTTCGCACCTATCACACT
GTACAAATTTTATCCACATCTCACACTTTTACACAGGTTTCCCACTATAC
GCATGGAGGAAGCCGAGAAGGGGGAAATGCTTCTAAACAGACGTCTGGCG
ACCTCGTCAACCTCGACTTTCCCTGCTCCACACGTTCCGCTCTCCGCCGC
ATCTCGAGCTGCTGTTGCAATAATATTGCGCGTAGCGGCTACTGCAGACG
CTACTGCTGCTATCGATCACGTCGCCTTCCCTCATAACCTTCATAGCTTT
CGAGCCTGGTACGAATCATTCCCCAAGTCTGCCCGGCCTGGGATGGAAGT
GCTTTTCATTCGCCGCCGCCCATAACCCGCAAGATAGATGGAGCGGCCAG
GTGGCTTTGCCGGGCGATCGTCACGTCCCAAAGGAGCAGATTTGGATTGT
GCCGTAAGAGGAGTGAAAAAAGAAGTGCGCATAGACCTGGCTTCGGGTGA
TGGACACTTTCATCTACTAGGGCGGCTGCCAGATCGCTTCGTGCGCACTG
CCAAGCCCTTTTTTGTTGCGTCGTTTGTTTTCCTACAGCTCGACACTGGA
TCCACGGAACTACTCCTTGCCGAGAAGGAAGTAGCAGATGCTTTCTGGTG
CTCCGACCTACTGCGGGACTGCCTTCTCTTTCAGAGCGACGGCGGGGTGA
ACTGGGTCCCGCACACCTTCACCAGAATCTCGATTCGCCGTTTCTTACTG
ACTGCCGCCTTCTCAATACTCTGCTCGAAATCAATTACGCTGGCCGTCAA
GCGCGTGTCTCTCGATGGATCGTGATGCTTGTGCTTGGATCAGCGGGCAC
TGTCATGCGTAGGTTATCGATTGCGGATAGAAGAATGGGCACAACTAGGC
TGCGATGGAAGACTTCAATAAAATAAACAAAAGCTTTCGGGGTGGGTTTA
TCAAGGACCAAATTAATCAGATCAAAATTCAAAATTTAGCCAGTATGCAA back to topprotein sequence of jgi.p|Nanoce1779_2|574689 >mRNA_927-protein ID=mRNA_927-protein|Name=jgi.p|Nanoce1779_2|574689|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MPRRHGGGSGSYYDEEKAAQSPHALLQAPLLLRMEQGNDEEEHNGLERDQ
EIARVPSCGASTAQCLIWARRKLLGYVVLLLLGLVLGLALPKNKQLQHDP
ASAALSNILGWTYFLAWTVSFYPQLLLNYRQQTTEGLSLDFELLNFLGFL
FYTAFALALQTAPSIQQAYRNQNDGHENKVTIQDVVFAGHAVLITAVTIA
QMFYYDGFDPKRKRLSRPISLVVLGLLATTVLALTVAGARGAKPSDWLDF
LYILSYMKLFITIIKGIPQAYLNYIRKSTSGWSIHNILCDFTGGLFSVMQ
LVVDCQVTNDWKGINGDLLKFFLGLFSMAFDVFFIVQHFILYPSPHAAKA
RPKSAHEPRRRGRGGEVAVQD* back to topmRNA from alignment at scaffold_2:769970..772723- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_927 ID=mRNA_927|Name=jgi.p|Nanoce1779_2|574689|organism=Nannochloropsis oceanica|type=mRNA|length=2754bp|location=Sequence derived from alignment at scaffold_2:769970..772723- (Nannochloropsis oceanica)
GCGCCCGAGGCCGACCTTACCTGGGGGCTACGAATACATAGAGCACTGTC
TTGTGCTTCTTCTACTGTCGCACAGGAGCCCATAAGGCCCTTTCCTCCAT
CAACAGAAGGGGTTTAGCTGCGAGCGCGCTCGCCTGCTCGCCAACCTCAC
TCTCTCTCAAACATCACACATTCACATATTTACGGAGAAATGCCTAGACG
CCATGGGGGAGGAAGCGGGTCATATTATGACGAGGAAAAGGCAGCGCAGA
GTCCTCATGCTCTACTGCAAGCTCCCTTGCTCCTCCGGATGGAGCAGGGG
AATGACGAGGAGGAGCATAACGGCTTGGAGAGGGATCAGGAGATTGCAAG
AGTACCAAGTTGCGGTGCCAGCACAGCTCAATGTCTCATTTGGGCGCGGC
GAAAACTTTTGGGATATGTCGTATTACTGCTGCTTGGCCTTGTTTTGGGT
TTGGCATTGCCTAAGAATAAGCAGCTTCAGCACGACCCTGCCTCTGCCGC
TCTCTCCAATATTCTGGGATGGACGTACTTCCTGGCCTGGACTGTCAGTT
TCTATCCGCAACTTCTTCTTAACTACCGGCAGCAAACTACTGAAGGACTT
TCCCTGGACTTTGAACTCCTGAATTTTCTGGGCTTCTTATTCTATACGGC
TTTTGCACTGGCTCTCCAGACGGCCCCTTCCATCCAGCAAGCGTATCGAA
ATCAGAACGATGGCCACGAAAACAAAGTGACGATCCAGGACGTGGTCTTT
GCGGGGCACGCCGTCCTCATAACTGCTGTAACTATCGCTCAAATGTTCTA
TTACGATGGCTTTGATCCAAAAAGAAAGCGACTTTCGAGGCCCATCTCCC
TGGTCGTGCTTGGATTGCTTGCCACCACCGTATTGGCTTTGACTGTCGCA
GGCGCGCGGGGAGCTAAGCCGTCGGACTGGCTTGATTTTTTGTACATTTT
GTCATATATGAAGCTCTTTATTACAATCATTAAAGGCATACCTCAAGCAT
ACTTAAACTATATACGCAAATCCACCTCGGGCTGGTCGATTCACAACATA
TTGTGCGACTTCACAGGTAGGTGTGCCATATGTTTTTTCCATCTTTCGAT
CATTCTTTCTTCCTTGTTTCATCCAACTTGCAACATCAAGATTCTTTCCT
CCCCAAGTGTTTTGTTCTACCCAATGTTTCAACCCCTCTTCACCATCCCT
CATCTACCAAAACAAAACAGGCGGCCTCTTTTCGGTGATGCAACTTGTGG
TGGACTGCCAAGTGACGAACGATTGGAAGGGTATCAATGGCGACCTTCTC
AAGTTCTTTTTAGGGCTGTTCTCCATGGCCTTCGATGTATTTTTCATCGT
CCAGCATTTTATCCTTTACCCCTCGCCTCACGCTGCAAAGGCACGACCGA
AGTCAGCCCATGAGCCTCGGCGGCGAGGGCGAGGAGGAGAAGTCGCGGTA
CAAGACTAGGAGAGTCAGACGGACGTTTTCACGCATCTCCACACGTGAAA
ATATTTGAATTGGTTTATGTACATGTGCAAAAATCACTACTGTCCGGCCG
CGGCAAGAAATCTCGTGAGCAGCAGCTGCTCTACTGAGAGCAGTGTGTAG
ATAGGAATTGACATAAATGTACAGCAGAAACAGGCACACTGGCTTCCAGG
CTGGTTTCTTGGCGACGTTGAAGAAAGAACAAATGTCAATTACAAGTTAG
AATTAGTAGCAAGGAAGCTCGAGCGGGTGCGATACTCGGATGCCTGCACT
TACATGCGTAATATCTTTTCCTCAACTTTGAAAGCCTTTCGCACCTATCA
CACTGTACAAATTTTATCCACATCTCACACTTTTACACAGGTTTCCCACT
ATACGCATGGAGGAAGCCGAGAAGGGGGAAATGCTTCTAAACAGACGTCT
GGCGACCTCGTCAACCTCGACTTTCCCTGCTCCACACGTTCCGCTCTCCG
CCGCATCTCGAGCTGCTGTTGCAATAATATTGCGCGTAGCGGCTACTGCA
GACGCTACTGCTGCTATCGATCACGTCGCCTTCCCTCATAACCTTCATAG
CTTTCGAGCCTGGTACGAATCATTCCCCAAGTCTGCCCGGCCTGGGATGG
AAGTGCTTTTCATTCGCCGCCGCCCATAACCCGCAAGATAGATGGAGCGG
CCAGGTGGCTTTGCCGGGCGATCGTCACGTCCCAAAGGAGCAGATTTGGA
TTGTGCCGTAAGAGGAGTGAAAAAAGAAGTGCGCATAGACCTGGCTTCGG
GTGATGGACACTTTCATCTACTAGGGCGGCTGCCAGATCGCTTCGTGCGC
ACTGCCAAGCCCTTTTTTGTTGCGTCGTTTGTTTTCCTACAGCTCGACAC
TGGATCCACGGAACTACTCCTTGCCGAGAAGGAAGTAGCAGATGCTTTCT
GGTGCTCCGACCTACTGCGGGACTGCCTTCTCTTTCAGAGCGACGGCGGG
GTGAACTGGGTCCCGCACACCTTCACCAGAATCTCGATTCGCCGTTTCTT
ACTGACTGCCGCCTTCTCAATACTCTGCTCGAAATCAATTACGCTGGCCG
TCAAGCGCGTGTCTCTCGATGGATCGTGATGCTTGTGCTTGGATCAGCGG
GCACTGTCATGCGTAGGTTATCGATTGCGGATAGAAGAATGGGCACAACT
AGGCTGCGATGGAAGACTTCAATAAAATAAACAAAAGCTTTCGGGGTGGG
TTTATCAAGGACCAAATTAATCAGATCAAAATTCAAAATTTAGCCAGTAT
GCAA back to topCoding sequence (CDS) from alignment at scaffold_2:769970..772723- >mRNA_927 ID=mRNA_927|Name=jgi.p|Nanoce1779_2|574689|organism=Nannochloropsis oceanica|type=CDS|length=2232bp|location=Sequence derived from alignment at scaffold_2:769970..772723- (Nannochloropsis oceanica)
GCGGCCTCTTTTCGGTGATGCAACTTGTGGTGGACTGCCAAGTGACGAAC
GATTGGAAGGGTATCAATGGCGACCTTCTCAAGTTCTTTTTAGGGCTGTT
CTCCATGGCCTTCGATGTATTTTTCATCGTCCAGCATTTTATCCTTTACC
CCTCGCCTCACGCTGCAAAGGCACGACCGAAGTCAGCCCATGAGCCTCGG
CGGCGAGGGCGAGGAGGAGAAGTCGCGGTACAAGACTAGATGCCTAGACG
CCATGGGGGAGGAAGCGGGTCATATTATGACGAGGAAAAGGCAGCGCAGA
GTCCTCATGCTCTACTGCAAGCTCCCTTGCTCCTCCGGATGGAGCAGGGG
AATGACGAGGAGGAGCATAACGGCTTGGAGAGGGATCAGGAGATTGCAAG
AGTACCAAGTTGCGGTGCCAGCACAGCTCAATGTCTCATTTGGGCGCGGC
GAAAACTTTTGGGATATGTCGTATTACTGCTGCTTGGCCTTGTTTTGGGT
TTGGCATTGCCTAAGAATAAGCAGCTTCAGCACGACCCTGCCTCTGCCGC
TCTCTCCAATATTCTGGGATGGACGTACTTCCTGGCCTGGACTGTCAGTT
TCTATCCGCAACTTCTTCTTAACTACCGGCAGCAAACTACTGAAGGACTT
TCCCTGGACTTTGAACTCCTGAATTTTCTGGGCTTCTTATTCTATACGGC
TTTTGCACTGGCTCTCCAGACGGCCCCTTCCATCCAGCAAGCGTATCGAA
ATCAGAACGATGGCCACGAAAACAAAGTGACGATCCAGGACGTGGTCTTT
GCGGGGCACGCCGTCCTCATAACTGCTGTAACTATCGCTCAAATGTTCTA
TTACGATGGCTTTGATCCAAAAAGAAAGCGACTTTCGAGGCCCATCTCCC
TGGTCGTGCTTGGATTGCTTGCCACCACCGTATTGGCTTTGACTGTCGCA
GGCGCGCGGGGAGCTAAGCCGTCGGACTGGCTTGATTTTTTGTACATTTT
GTCATATATGAAGCTCTTTATTACAATCATTAAAGGCATACCTCAAGCAT
ACTTAAACTATATACGCAAATCCACCTCGGGCTGGTCGATTCACAACATA
TTGTGCGACTTCACAGGCGGCCTCTTTTCGGTGATGCAACTTGTGGTGGA
CTGCCAAGTGACGAACGATTGGAAGGGTATCAATGGCGACCTTCTCAAGT
TCTTTTTAGGGCTGTTCTCCATGGCCTTCGATGTATTTTTCATCGTCCAG
CATTTTATCCTTTACCCCTCGCCTCACGCTGCAAAGGCACGACCGAAGTC
AGCCCATGAGCCTCGGCGGCGAGGGCGAGGAGGAGAAGTCGCGGTACAAG
ACTAGATGCCTAGACGCCATGGGGGAGGAAGCGGGTCATATTATGACGAG
GAAAAGGCAGCGCAGAGTCCTCATGCTCTACTGCAAGCTCCCTTGCTCCT
CCGGATGGAGCAGGGGAATGACGAGGAGGAGCATAACGGCTTGGAGAGGG
ATCAGGAGATTGCAAGAGTACCAAGTTGCGGTGCCAGCACAGCTCAATGT
CTCATTTGGGCGCGGCGAAAACTTTTGGGATATGTCGTATTACTGCTGCT
TGGCCTTGTTTTGGGTTTGGCATTGCCTAAGAATAAGCAGCTTCAGCACG
ACCCTGCCTCTGCCGCTCTCTCCAATATTCTGGGATGGACGTACTTCCTG
GCCTGGACTGTCAGTTTCTATCCGCAACTTCTTCTTAACTACCGGCAGCA
AACTACTGAAGGACTTTCCCTGGACTTTGAACTCCTGAATTTTCTGGGCT
TCTTATTCTATACGGCTTTTGCACTGGCTCTCCAGACGGCCCCTTCCATC
CAGCAAGCGTATCGAAATCAGAACGATGGCCACGAAAACAAAGTGACGAT
CCAGGACGTGGTCTTTGCGGGGCACGCCGTCCTCATAACTGCTGTAACTA
TCGCTCAAATGTTCTATTACGATGGCTTTGATCCAAAAAGAAAGCGACTT
TCGAGGCCCATCTCCCTGGTCGTGCTTGGATTGCTTGCCACCACCGTATT
GGCTTTGACTGTCGCAGGCGCGCGGGGAGCTAAGCCGTCGGACTGGCTTG
ATTTTTTGTACATTTTGTCATATATGAAGCTCTTTATTACAATCATTAAA
GGCATACCTCAAGCATACTTAAACTATATACGCAAATCCACCTCGGGCTG
GTCGATTCACAACATATTGTGCGACTTCACAG back to top
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