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Properties
| Property Name | Value |
|---|
| TranscriptId | 605831 |
| Track | FilteredModels2 |
| ProteinId | 605745 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_33 | supercontig | scaffold_33:45611..46939 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9230 ID=mRNA_9230|Name=jgi.p|Nanoce1779_2|605745|organism=Nannochloropsis oceanica|type=mRNA|length=999bp
CAGAAGCGAGATACCCCCAGCCCTCCGAGACACAGAGGAGACGTCCCTTC
AAACGAGTGAATTTGCCTTGCGCACTGCCAATTTCTCCACAGTCATGCAG
ACTTTTTTTCGTTTATCTCCCCCCGATCCTCCATTGGAAGGGGAGTACTT
GGCTGAGCTCTTGGACGCGGGAACAGGGATGAATAACATGCTGGCCACGT
TGGGCTTTGGCAACCCGGTGCTCCCTGGTTTCTGGGTCGGCAAGGGTTTT
CTGAAAGGTGAAAACGGCCGCAGCATGGGCTACAACCTCTTCATGGAGGA
GAGAGGGAGGGCGGGCAGGGCGGAAGGAAGTCAGTTGGTGCGCAAGTACC
GCATGATAACACGGGCGGACGTTCCTTCTGTATGGGACGGAAAACCGAGC
TCAGAATTGGATTATCGGGGCGAGACGCATTACTTGGGGAGGATGGAAAT
GAGGGATGAAGTGCGAGAGGTGGCGCCTGCATTGTACCTAGGTTTGGGGA
GCTTTGGTATGCGAGACGTGAGGAAGGAGCAGCCGTTACCCTTTCTGTTG
CGCGGTCCCTTTCACGCACCTTTGCCCCTGGGAGAAGTAATGATGCTGGA
TCGTGAGGCAGGAGACTAGAATGTCCTCTACCACGTCTATTTCACAAACT
GCGCCCCCTCGCGAGGGTGTCAATACAGGGAAAGGAGAAAGAGGGAAGGA
AATGGAGAAAGGAGGAGAAAGGAGGAGAAGACGGAGGAGGTGGAGATAAA
GGAGCAGAGGGGGAGGACGAAGGGGACGGGAAGCATGACGTGGAAGAGGT
GGTGGTGGATGAGGAGGCAGATGACAAGACAAATTCAAAGCAGGGCACAC
TCAAAGAGAGGCACAGAGCAGAGGAGGAGGATGAAGTGAAAGAAGGACAA
GGAGGGGTAGAAGGGGAGGAGGAGGTTGAAGAGGAGGAGGAGGTTGAAGA
GGAGGGAGGAAACAAAAACAAATACGAGGCAATCATCCGAAAGCTGTCA back to topprotein sequence of jgi.p|Nanoce1779_2|605745 >mRNA_9230-protein ID=mRNA_9230-protein|Name=jgi.p|Nanoce1779_2|605745|organism=Nannochloropsis oceanica|type=polypeptide|length=175bp
MQTFFRLSPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGK
GFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGK
PSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPF
LLRGPFHAPLPLGEVMMLDREAGD* back to topmRNA from alignment at scaffold_33:45611..46939+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9230 ID=mRNA_9230|Name=jgi.p|Nanoce1779_2|605745|organism=Nannochloropsis oceanica|type=mRNA|length=1329bp|location=Sequence derived from alignment at scaffold_33:45611..46939+ (Nannochloropsis oceanica)
CAGAAGCGAGATACCCCCAGCCCTCCGAGACACAGAGGAGACGTCCCTTC
AAACGAGTGAATTTGCCTTGCGCACTGCCAATTTCTCCACAGTCATGCAG
ACTTTTTTTCGTTTATCTCCCCCCGATCCTCCATTGGAAGGGGAGTACTT
GGCTGAGCTCTTGGACGCGGGAACAGGGATGAATAACATGCTGGCCACGT
TGGGCTTTGGCAACCCGGTGCTCCCTGGCAAGTAAAGGAGTGAGCTAGTT
TGCCTCTTGAGGGGCTTTCTTCCCTTTTACGTCAGATTTCTTACTATTAT
ATCCACAAATGGGAAATACTGATTTCGTCCTTACATCCATTCTCCCGCTT
CACTCCTTCCTCCCTATTTTCCATCTTTGTCCTCCCCAAAAGGTTTCTGG
GTCGGCAAGGGTTTTCTGAAAGGTGAAAACGGCCGCAGCATGGGCTACAA
CCTCTTCATGGAGGAGAGAGGGAGGGCGGGCAGGGCGGAAGGAAGTCAGT
TGGTGCGCAAGTACCGCATGATAACACGGGCGGACGTTCCTTCTGTATGG
GACGGAAAACCGAGCTCAGAATTGGATTATCGGGGCGAGACGCATTACTT
GGGGAGGATGGAAATGAGGGATGAAGTGCGAGAGGTGGCGCCTGCATTGT
ACCTAGGTTTGGGGAGCTTTGGTATGCGAGACGTGAGGTAGGAAAGGAGG
GAGAGAAGGAGGGGAGGGGAGGAGGGTAGGGGCGGGAGGGTCAGTTCTCA
TGGAGAATTGTGCTTCGGCATGCCTCTCTCCTAACACGTTTCTCATCTCA
TTTTCCGCTCCCTGTTTATCATTTTTTTGGGATTGAAAAATCCCACGAAC
AGGAAGGAGCAGCCGTTACCCTTTCTGTTGCGCGGTCCCTTTCACGCACC
TTTGCCCCTGGGAGAAGTAATGATGCTGGATCGTGAGGCAGGAGACTAGA
ATGTCCTCTACCACGTCTATTTCACAAACTGCGCCCCCTCGCGAGGGTGT
CAATACAGGGAAAGGAGAAAGAGGGAAGGAAATGGAGAAAGGAGGAGAAA
GGAGGAGAAGACGGAGGAGGTGGAGATAAAGGAGCAGAGGGGGAGGACGA
AGGGGACGGGAAGCATGACGTGGAAGAGGTGGTGGTGGATGAGGAGGCAG
ATGACAAGACAAATTCAAAGCAGGGCACACTCAAAGAGAGGCACAGAGCA
GAGGAGGAGGATGAAGTGAAAGAAGGACAAGGAGGGGTAGAAGGGGAGGA
GGAGGTTGAAGAGGAGGAGGAGGTTGAAGAGGAGGGAGGAAACAAAAACA
AATACGAGGCAATCATCCGAAAGCTGTCA back to topCoding sequence (CDS) from alignment at scaffold_33:45611..46939+ >mRNA_9230 ID=mRNA_9230|Name=jgi.p|Nanoce1779_2|605745|organism=Nannochloropsis oceanica|type=CDS|length=1575bp|location=Sequence derived from alignment at scaffold_33:45611..46939+ (Nannochloropsis oceanica)
ATGCAGACTTTTTTTCGTTTATCTCCCCCCGATCCTCCATTGGAAGGGGA
GTACTTGGCTGAGCTCTTGGACGCGGGAACAGGGATGAATAACATGCTGG
CCACGTTGGGCTTTGGCAACCCGGTGCTCCCTGGTTTCTGGGTCGGCAAG
GGTTTTCTGAAAGGTGAAAACGGCCGCAGCATGGGCTACAACCTCTTCAT
GGAGGAGAGAGGGAGGGCGGGCAGGGCGGAAGGAAGTCAGTTGGTGCGCA
AGTACCGCATGATAACACGGGCGGACGTTCCTTCTGTATGGGACGGAAAA
CCGAGCTCAGAATTGGATTATCGGGGCGAGACGCATTACTTGGGGAGGAT
GGAAATGAGGGATGAAGTGCGAGAGGTGGCGCCTGCATTGTACCTAGGTT
TGGGGAGCTTTGGTATGCGAGACGTGAGGAAGGAGCAGCCGTTACCCTTT
CTGTTGCGCGGTCCCTTTCACGCACCTTTGCCCCTGGGAGAAGTAATGAT
GCTGGATCGTGAGGCAGGAGACTAGATGCAGACTTTTTTTCGTTTATCTC
CCCCCGATCCTCCATTGGAAGGGGAGTACTTGGCTGAGCTCTTGGACGCG
GGAACAGGGATGAATAACATGCTGGCCACGTTGGGCTTTGGCAACCCGGT
GCTCCCTGGTTTCTGGGTCGGCAAGGGTTTTCTGAAAGGTGAAAACGGCC
GCAGCATGGGCTACAACCTCTTCATGGAGGAGAGAGGGAGGGCGGGCAGG
GCGGAAGGAAGTCAGTTGGTGCGCAAGTACCGCATGATAACACGGGCGGA
CGTTCCTTCTGTATGGGACGGAAAACCGAGCTCAGAATTGGATTATCGGG
GCGAGACGCATTACTTGGGGAGGATGGAAATGAGGGATGAAGTGCGAGAG
GTGGCGCCTGCATTGTACCTAGGTTTGGGGAGCTTTGGTATGCGAGACGT
GAGGAAGGAGCAGCCGTTACCCTTTCTGTTGCGCGGTCCCTTTCACGCAC
CTTTGCCCCTGGGAGAAGTAATGATGCTGGATCGTGAGGCAGGAGACTAG
ATGCAGACTTTTTTTCGTTTATCTCCCCCCGATCCTCCATTGGAAGGGGA
GTACTTGGCTGAGCTCTTGGACGCGGGAACAGGGATGAATAACATGCTGG
CCACGTTGGGCTTTGGCAACCCGGTGCTCCCTGGTTTCTGGGTCGGCAAG
GGTTTTCTGAAAGGTGAAAACGGCCGCAGCATGGGCTACAACCTCTTCAT
GGAGGAGAGAGGGAGGGCGGGCAGGGCGGAAGGAAGTCAGTTGGTGCGCA
AGTACCGCATGATAACACGGGCGGACGTTCCTTCTGTATGGGACGGAAAA
CCGAGCTCAGAATTGGATTATCGGGGCGAGACGCATTACTTGGGGAGGAT
GGAAATGAGGGATGAAGTGCGAGAGGTGGCGCCTGCATTGTACCTAGGTT
TGGGGAGCTTTGGTATGCGAGACGTGAGGAAGGAGCAGCCGTTACCCTTT
CTGTTGCGCGGTCCCTTTCACGCACCTTTGCCCCTGGGAGAAGTAATGAT
GCTGGATCGTGAGGCAGGAGACTAG back to top
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