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Properties
Property Name | Value |
TranscriptId | 605817 |
Track | FilteredModels2 |
ProteinId | 605731 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_33 | supercontig | scaffold_33:37719..38928 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9226 ID=mRNA_9226|Name=jgi.p|Nanoce1779_2|605731|organism=Nannochloropsis oceanica|type=mRNA|length=558bp CCTCACCGAGACCCTCACGTTCTGGCCGGCGTCATTAAGATTGTCATTCA CAAACGTCCTCCACTTCTCAAGGGCGGCTTCACGGGACATAGTCCGAAGG GGAGGGGTTGCTGGTTTTTTCTTGTTGGGAGGGATGCTAACCGTTGCAAA ACGGCTCGCGGCGGTGTGTCGGAGCAAGCATCGCCTGTCGCTTGTTGATC CTCCCTGGCCTAGGCTTTTGCTGATACTGCTGCTGTATGTATTGAACTGC TGCCGCTGCCGCTGGGTAATGCTGAGAAAGGTTGACGAGACAGGAAGGGA AGGGCAGGCGACGGGGTACGGAGGAATGAAGGCATCAACGACGATGTGGG CCAGCACAAGGCAATGGAAAAAAAGACGGATGAGAGACCTGCCATGCACA CTGCGGGGACTTGAGGGCAAATATCTTTTTCGATGGAGTGGTCGTGGGCC TCTGATTCTGACACTGCTGTCCATGCTCCTGCTCCTGCAGCTGCCGCTGC GTGTCATGACGAGCGGCCTAGTCCCGGCCGCGTGGAATGTGGTGCGTTGG ATGTTCTG back to topprotein sequence of jgi.p|Nanoce1779_2|605731 >mRNA_9226-protein ID=mRNA_9226-protein|Name=jgi.p|Nanoce1779_2|605731|organism=Nannochloropsis oceanica|type=polypeptide|length=141bp MLTVAKRLAAVCRSKHRLSLVDPPWPRLLLILLLYVLNCCRCRWVMLRKV DETGREGQATGYGGMKASTTMWASTRQWKKRRMRDLPCTLRGLEGKYLFR WSGRGPLILTLLSMLLLLQLPLRVMTSGLVPAAWNVVRWMF back to topmRNA from alignment at scaffold_33:37719..38928+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9226 ID=mRNA_9226|Name=jgi.p|Nanoce1779_2|605731|organism=Nannochloropsis oceanica|type=mRNA|length=1210bp|location=Sequence derived from alignment at scaffold_33:37719..38928+ (Nannochloropsis oceanica) CCTCACCGAGACCCTCACGTTCTGGCCGGCGTCATTAAGATTGTCATTCA
CAAACGTCCTCCACTTCTCAAGGGCGGCTGCCAGAGAGGGAGGGAGGGAG
GGAAGGAGGGAGGGAGGGAGGAGGAAGGAAAAATTAACTTTTGTGTACTC
TAAAGGATATTAGAATCGGGAAAAAAATGGAAAAAGAGGAGAAAGGAATG
AAGAGGAGAGGGAGGGAGGATGGGAAAGAGGGAGCAGACGGACCTTCACG
GGACATAGTCCGAAGGGGAGGGGTTGCTGGTTTTTTCTTGTTGGGAGGGA
TGCTAACCGTTGCAAAACGGCTCGCGGCGGTGTGTCGGAGCAAGCATCGC
CTGTCGCTGTTTGTGTTTTTGGTATGTGCGTACGATAGAGAGGGTAGTGG
AAGGGAAGGAAGTTAAATTCGAAATGGAGAGCAGGACACACGTATTAACG
GGGGGAAAATTGTTAATCTGCCGCGTGGGCCTGCGGGGGATAGCGGTGTC
TAAGGCGAGGAGTGTTGAAGCATGTCTGAGTACGCTCCTTCTACTCCCAC
TTCTCATTATACTGTTGCTGCGGTCGCTGCTTCGCACCGGTAAATTGTTT
TTGTGTGATATTCAAAATATTAAAAAAAAAAAAAAAAAAAAAAGTGAAAA
GAAGAGTAGGAATTTAGAGCGTGTGAAGGGGAAAAAATAGGAAATCTGGC
TCGGATAGATGTGTACATATGTATGTTTATATGTGTATTAAATTTGTGAA
AGAGGCGTAGAAAAGGATAGAGTGAAGGAGGAAGGGGGGAAGGAAGGAAC
TGAGGAAAGGGGACGCAGTTGCATGGGCCCGCGGCTGATTACCTTGTTGA
TCCTCCCTGGCCTAGGCTTTTGCTGATACTGCTGCTGTATGTATTGAACT
GCTGCCGCTGCCGCTGGGTAATGCTGAGAAAGGTTGACGAGACAGGAAGG
GAAGGGCAGGCGACGGGGTACGGAGGAATGAAGGCATCAACGACGATGTG
GGCCAGCACAAGGCAATGGAAAAAAAGACGGATGAGAGACCTGCCATGCA
CACTGCGGGGACTTGAGGGCAAATATCTTTTTCGATGGAGTGGTCGTGGG
CCTCTGATTCTGACACTGCTGTCCATGCTCCTGCTCCTGCAGCTGCCGCT
GCGTGTCATGACGAGCGGCCTAGTCCCGGCCGCGTGGAATGTGGTGCGTT
GGATGTTCTG back to topCoding sequence (CDS) from alignment at scaffold_33:37719..38928+ >mRNA_9226 ID=mRNA_9226|Name=jgi.p|Nanoce1779_2|605731|organism=Nannochloropsis oceanica|type=CDS|length=850bp|location=Sequence derived from alignment at scaffold_33:37719..38928+ (Nannochloropsis oceanica) ATGCTAACCGTTGCAAAACGGCTCGCGGCGGTGTGTCGGAGCAAGCATCG CCTGTCGCTTGTTGATCCTCCCTGGCCTAGGCTTTTGCTGATACTGCTGC TGTATGTATTGAACTGCTGCCGCTGCCGCTGGGTAATGCTGAGAAAGGTT GACGAGACAGGAAGGGAAGGGCAGGCGACGGGGTACGGAGGAATGAAGGC ATCAACGACGATGTGGGCCAGCACAAGGCAATGGAAAAAAAGACGGATGA GAGACCTGCCATGCACACTGCGGGGACTTGAGGGCAAATATCTTTTTCGA TGGAGTGGTCGTGGGCCTCTGATTCTGACACTGCTGTCCATGCTCCTGCT CCTGCAGCTGCCGCTGCGTGTCATGACGAGCGGCCTAGTCCCGGCCGCGT GGAATGTGGTGCGTTGGATGTTCTGATGCTAACCGTTGCAAAACGGCTCG CGGCGGTGTGTCGGAGCAAGCATCGCCTGTCGCTTGTTGATCCTCCCTGG CCTAGGCTTTTGCTGATACTGCTGCTGTATGTATTGAACTGCTGCCGCTG CCGCTGGGTAATGCTGAGAAAGGTTGACGAGACAGGAAGGGAAGGGCAGG CGACGGGGTACGGAGGAATGAAGGCATCAACGACGATGTGGGCCAGCACA AGGCAATGGAAAAAAAGACGGATGAGAGACCTGCCATGCACACTGCGGGG ACTTGAGGGCAAATATCTTTTTCGATGGAGTGGTCGTGGGCCTCTGATTC TGACACTGCTGTCCATGCTCCTGCTCCTGCAGCTGCCGCTGCGTGTCATG ACGAGCGGCCTAGTCCCGGCCGCGTGGAATGTGGTGCGTTGGATGTTCTG back to top
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