jgi.p|Nanoce1779_2|659258, mRNA_9211 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|659258
Unique NamemRNA_9211
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length814
Alignment locationscaffold_36:229778..230591 -

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Properties
Property NameValue
TranscriptId659344
TrackFilteredModels2
ProteinId659258
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:229778..230591 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|659258gene_9211Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|659258mRNA_9211-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_9211CDS_9211Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_9211 ID=mRNA_9211|Name=jgi.p|Nanoce1779_2|659258|organism=Nannochloropsis oceanica|type=mRNA|length=814bp
CAAGGCCGACCAAAGGAAACGCTCGAAATAATTGCGCGAACCCTCGTGTT
CAAGGACGCAGATAGGGTGAAGGTAGGACTAAAGGCCCTTAAACCGGAGG
CAGAAGGGCTGGAGGGAGGGAGTCCAGAAGTGAGGGGAACGAGGGGTTGG
TTGGGAGGGCTGTTGTCGAGGGTGGAAGGGGCGATTAGCTCGCCCAGGAA
GGCATATGTCCCGGAGGATGGGGTCCTGGAGGGGAAATCACTTGGGGATT
TATGGATGGATTACTTGATGAATGAGACAGAGGAGGAAGGGGAGGGGGAA
GAAGGGGTAGAAGAGGCTCCGCCGTCTCCGCCAGATTTGGCGGCATTGGT
CCGGAGAGAGGCGCCAGCAGGAGCAGTGAAAGCAGAGGGGGAAGGGAATT
CGGTAGATGATGCTGCTAAATATTTTGGTGTGGGTGGTAAAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGTGGAAGAGAGCAAGGTGACGGTGACGAGTGATTAAAGGA
TGTATATAAGAGGTGCTCAGGGGAAATGAGTGCAGAAGATCATGTTTTAA
AAGAAGAAGGAATGACCACACAATTTTGAGGCGAAATGTGTCAGCTGGTA
CCATTCCTGTCGTACAATTCATTCATTGGCTTCATCTTCACACACGCACG
CAGGCAAGGACCTTCTCTCCTTCTTTTGTTAGTTTCTCCTTAATCCCTAC
TTTTGGTACAAAATTCTAGACATGCCTTGGACATCTTGTTTTCAAGTGAT
CTTTATTTTCCTCA
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protein sequence of jgi.p|Nanoce1779_2|659258

>mRNA_9211-protein ID=mRNA_9211-protein|Name=jgi.p|Nanoce1779_2|659258|organism=Nannochloropsis oceanica|type=polypeptide|length=182bp
QGRPKETLEIIARTLVFKDADRVKVGLKALKPEAEGLEGGSPEVRGTRGW
LGGLLSRVEGAISSPRKAYVPEDGVLEGKSLGDLWMDYLMNETEEEGEGE
EGVEEAPPSPPDLAALVRREAPAGAVKAEGEGNSVDDAAKYFGVGGKGGG
GGGGGGGGGGGGGGGGGGGGVEESKVTVTSD*
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mRNA from alignment at scaffold_36:229778..230591-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9211 ID=mRNA_9211|Name=jgi.p|Nanoce1779_2|659258|organism=Nannochloropsis oceanica|type=mRNA|length=814bp|location=Sequence derived from alignment at scaffold_36:229778..230591- (Nannochloropsis oceanica)
CAAGGCCGACCAAAGGAAACGCTCGAAATAATTGCGCGAACCCTCGTGTT
CAAGGACGCAGATAGGGTGAAGGTAGGACTAAAGGCCCTTAAACCGGAGG
CAGAAGGGCTGGAGGGAGGGAGTCCAGAAGTGAGGGGAACGAGGGGTTGG
TTGGGAGGGCTGTTGTCGAGGGTGGAAGGGGCGATTAGCTCGCCCAGGAA
GGCATATGTCCCGGAGGATGGGGTCCTGGAGGGGAAATCACTTGGGGATT
TATGGATGGATTACTTGATGAATGAGACAGAGGAGGAAGGGGAGGGGGAA
GAAGGGGTAGAAGAGGCTCCGCCGTCTCCGCCAGATTTGGCGGCATTGGT
CCGGAGAGAGGCGCCAGCAGGAGCAGTGAAAGCAGAGGGGGAAGGGAATT
CGGTAGATGATGCTGCTAAATATTTTGGTGTGGGTGGTAAAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGTGGAAGAGAGCAAGGTGACGGTGACGAGTGATTAAAGGA
TGTATATAAGAGGTGCTCAGGGGAAATGAGTGCAGAAGATCATGTTTTAA
AAGAAGAAGGAATGACCACACAATTTTGAGGCGAAATGTGTCAGCTGGTA
CCATTCCTGTCGTACAATTCATTCATTGGCTTCATCTTCACACACGCACG
CAGGCAAGGACCTTCTCTCCTTCTTTTGTTAGTTTCTCCTTAATCCCTAC
TTTTGGTACAAAATTCTAGACATGCCTTGGACATCTTGTTTTCAAGTGAT
CTTTATTTTCCTCA
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Coding sequence (CDS) from alignment at scaffold_36:229778..230591-

>mRNA_9211 ID=mRNA_9211|Name=jgi.p|Nanoce1779_2|659258|organism=Nannochloropsis oceanica|type=CDS|length=546bp|location=Sequence derived from alignment at scaffold_36:229778..230591- (Nannochloropsis oceanica)
CAAGGCCGACCAAAGGAAACGCTCGAAATAATTGCGCGAACCCTCGTGTT
CAAGGACGCAGATAGGGTGAAGGTAGGACTAAAGGCCCTTAAACCGGAGG
CAGAAGGGCTGGAGGGAGGGAGTCCAGAAGTGAGGGGAACGAGGGGTTGG
TTGGGAGGGCTGTTGTCGAGGGTGGAAGGGGCGATTAGCTCGCCCAGGAA
GGCATATGTCCCGGAGGATGGGGTCCTGGAGGGGAAATCACTTGGGGATT
TATGGATGGATTACTTGATGAATGAGACAGAGGAGGAAGGGGAGGGGGAA
GAAGGGGTAGAAGAGGCTCCGCCGTCTCCGCCAGATTTGGCGGCATTGGT
CCGGAGAGAGGCGCCAGCAGGAGCAGTGAAAGCAGAGGGGGAAGGGAATT
CGGTAGATGATGCTGCTAAATATTTTGGTGTGGGTGGTAAAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGTGGAAGAGAGCAAGGTGACGGTGACGAGTGATTAA
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Synonyms
Publications