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Properties
| Property Name | Value |
|---|
| TranscriptId | 574739 |
| Track | FilteredModels2 |
| ProteinId | 574653 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:755517..758507 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_921 ID=mRNA_921|Name=jgi.p|Nanoce1779_2|574653|organism=Nannochloropsis oceanica|type=mRNA|length=2823bp
AAGGAATATTGGTAGTCGTCCAACGTGTGATTTGAAGCCCCCCCCCCCCC
GCCTACCACGGTGCTCAATTCCGTGACACATTATTCCGCCCCTCGGTAGC
CGGTTTGCGTGGCTTGTATTGCTGCGCTCTCCTGGGAAGGCGTGCAAAGA
AAACAATACCACGGTCTAACCTTGCTTCCCTTTTCATTTTCTCGAGAAGA
CAGCCTGTGAGCAGCGGCGGTGAATTTCTCAGCTGAGCAACATCACTTGA
GAGAATTCTGTCCTGACCGCAATGATGGGGGGGGCGCAAGGCATCCCACG
GGCGTTGGCACCAGTGGTGCTGCTTTCATTCTGCGTAATTGCACCTTCTT
GGGCATTTGTTCGACCCGTTCCCGCCAGATGCACACTTTCTTCCTCTCTT
TCCGGCCACACCATAATCGCAAGTGCCACCCACGTTCCTGGAAGCACACT
GGCATGCTCAACGCCTACGGCAGCCAGCTACAGTCAAAAAAGGGCAGTTA
TAAAATTCATTACGAGCAATCCTCTTAAAACGCGTGAAGTGCAAGCCCTA
TTGGCGGAAGGAGGTCTTCGAGTGCCCTTCGACATTCAGACTCTTGATAT
ACAGCTGCCTGAGCTGCAAGAGTCTCCGCTGGTGATTGCAATTGAAAAGA
CTCGGCTAGCCTCAAACAGAGTAAAGGCGCCATGCCTTGTAGAGGACACC
TCGTTGTGCCTCAACGCACTCGGCGGGTTACCAGGACCATACATCAAGCA
CTTCTTGGATGAGTTGGGAAGCGCGGGATTGTTTAAGATGGTGGAAGCTT
ACGAAGACCGCTCCGCCAGGGCCATCTGCAACGTCGGGTTTTCTCCCGGT
CCAGGGCAGCAGCCCGTAATTTTTACTGGTATCACATACGGCGAAATTGT
TCTCCCGGAAGAGGACGACAACGGGTTTGGATGGGATACTTGCTTTCGTC
CTTCTGGGTTCACCACCACTTTCTCGAAGATGACGGTCAATGAGAAGAAT
GCCATTTCTCACCGCAGTTTGGCGTTGCGCCAATTCCAACAATACATAGC
AGATAATTGGGGCGAGGGAGGATTTGATGAAAGGGGTGTATTCAAGTAGG
CATGGCTCTGGTCGCACTCACCAGAGCCCGTATTAACTGTCGATTGAGTT
AACATATGGAGTCATAGTCTCATTTTGGTTTTCATTTTGACTTGCCCGAG
AGCAGCAGCGGTAATATTTGATTCTGATGAGGCAATCAAAGCTTCTGCTG
TTCAAATATCAAATATCGTGTGTGTTCAAGAGTCAAGATGAGATTAAGAT
AGGCGAAAAGAAAGATCATTCCAGACCTGGCATAGAGAAGAGCGTGGAGG
AAGTGAATGGCTTTAAAAATCTAAAAATGGTTCTACAAAGGACATTTTGC
ATTCTTAGAGGCCTATTTGAGTCGCAGGGCATTACATAGCTTCCCTACAG
ACTTCTGTACAGCAAAGTGTGGACAACACAACACCCAAAGCATCCAAAGA
ATAAAGTGGCAGCACAGCAAAAGCCAAAAAAAAAAGATCGGGTGGCCGCA
TACCGAAGGATGTCTGTTACACCACCAAGCAGACTCGAGTATTCCATCAC
TGCATGGCTCGTCACGGACCCTCTCGGGTTTGAGCCTCGCCCCTTGGGGT
TCTACTCACGATAGTCACTACCTCTGCTTCAAGGTGAGATTCCTCTTCTT
TCTAAACAATGTCAATATGTTCTTTAACATCTTAGTGGGAGTCATTCACT
TGTTTGTCGGGGCTGACTAGAGACATTTCAAAAGAAAGAAAGCCTTGGCC
CCCTTCCTGAACGTCTTATTACATAACTGTAGCATGATTGTATATTACAC
TACTTTCTATTACAGGAGGGTGATGGATCCTAAGTCAACGACTGAAGTGA
GAAAAATCACACTTCTTGCTTTTACTAGATCGGAAGCATCAGTGCTCGCC
TATCTATTTATCAAACATGCTTTTGCTCTCTCCTCAGCCTCCAATCCCTA
GCCTGTCTTCAGCTCAGCCTAAGCTACTTATACCGCTCCATTCGGATTGT
TTATTTCGCCCGTTTCCTCACAACATAGCTCAGTGTCCACGTAACTGTCT
GGGCATTCCCTTCGGGAAAACGGATCTTCCACACGGTACGGATGTGGCCC
AACGATGTGATCGAGTAAATAGACAGAGGTTCTTCTGTGTGTGAACGTAC
ACGAGGCATGTGCGGCAGATGAAGTCCGTGTGGTGATCCTTGTACCGATC
CCTGCACCTTTTCGGACCCCTCGGGTGCCCCTTCCAAAACTGTGGTGTCC
TCCGATCCAGGCAAGTCCAACCAAATATGGTGCAGGCCCCCGTCCACCTG
CTTGCCTGCGTCAAGCGTCACGCGTACTATCACCCGAGTCCCTTTTTCTT
CCTTCCTCTTGGAGAGTAACTCCCCCCAATCCAAACATCTCAACTCCCAT
CCGCACGTGAAATGCACATCCGAACCTAGGTACATAGGTGGCAGCTGTAG
TAGCTGCTGCTGTTCCTGAGATGAACACGCGGCATGTTCCCCGCGTTCAT
CGATACGCACAGCATATAGGCGCGCCGAGTGAGGCAACACGCCACCGCCG
ATTGTTGACAGGGCAGATGCGCTCATGACTGCATCGGGTGTGGCATTTAA
ATCTAACCGCACTCGGAAATATTCGGAGGTCCAAAACTCGAGCACGTGCA
AAGTCAATGGCCCCATCGCGCCCCCAACGACGCCATCATTGCTGCTGCTG
CTGCTGCTGCTGCTGCCGGTAGCCCCGGACAACAACGGTCGCAGCAAAGC
CTTCCAAGGATAGGTGACTTCCT back to topprotein sequence of jgi.p|Nanoce1779_2|574653 >mRNA_921-protein ID=mRNA_921-protein|Name=jgi.p|Nanoce1779_2|574653|organism=Nannochloropsis oceanica|type=polypeptide|length=276bp
MMGGAQGIPRALAPVVLLSFCVIAPSWAFVRPVPARCTLSSSLSGHTIIA
SATHVPGSTLACSTPTAASYSQKRAVIKFITSNPLKTREVQALLAEGGLR
VPFDIQTLDIQLPELQESPLVIAIEKTRLASNRVKAPCLVEDTSLCLNAL
GGLPGPYIKHFLDELGSAGLFKMVEAYEDRSARAICNVGFSPGPGQQPVI
FTGITYGEIVLPEEDDNGFGWDTCFRPSGFTTTFSKMTVNEKNAISHRSL
ALRQFQQYIADNWGEGGFDERGVFK* back to topmRNA from alignment at scaffold_2:755517..758507- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_921 ID=mRNA_921|Name=jgi.p|Nanoce1779_2|574653|organism=Nannochloropsis oceanica|type=mRNA|length=2991bp|location=Sequence derived from alignment at scaffold_2:755517..758507- (Nannochloropsis oceanica)
AAGGAATATTGGTAGTCGTCCAACGTGTGATTTGAAGCCCCCCCCCCCCC
GCCTACCACGGTGCTCAATTCCGTGACACATTATTCCGCCCCTCGGTAGC
CGGTTTGCGTGGCTTGTATTGCTGCGCTCTCCTGGGAAGGCGTGCAAAGA
AAACAATACCACGGTCTAACCTTGCTTCCCTTTTCATTTTCTCGAGAAGA
CAGCCTGTGAGCAGCGGCGGTGAATTTCTCAGCTGAGCAACATCACTTGA
GAGAATTCTGTCCTGACCGCAATGATGGGGGGGGCGCAAGGCATCCCACG
GGCGTTGGCACCAGTGGTGCTGCTTTCATTCTGCGTAATTGCACCTTCTT
GGGCATTTGTTCGACCCGTTCCCGCCAGATGCACACTTTCTTCCTCTCTT
TCCGGCCACACCATAATCGCAAGTGCCACCCACGTTCCTGGAAGCACACT
GGCATGCTCAACGCCTACGGCAGCCAGCTACAGTCAAAAAAGGGCAGTTA
TAAAATTCATTACGAGCAATCCTCTTAAAACGCGTGAAGTGCAAGCCCTA
TTGGCGGAAGGAGGTCTTCGAGTGCCCTTCGACATTCAGACTCTTGATAT
ACAGCTGCCTGAGCTGCAAGAGTCTCCGCTGGTGATTGCAATTGAAAAGA
CTCGGCTAGCCTCAAACAGAGTAAAGGTAAGCTTTTTCATTTCCTCGCCA
CCAACTCACTTCTGCTTCCTTCCAGTAAGTCACTTCTTACCTGTCCCTTC
CCTTTGACACGTACAGGCGCCATGCCTTGTAGAGGACACCTCGTTGTGCC
TCAACGCACTCGGCGGGTTACCAGGACCATACATCAAGCACTTCTTGGAT
GAGTTGGGAAGCGCGGGATTGTTTAAGGTATGCTTTTCAACATGTATTCG
TGGAGGAGAGGTTGACCCACATCATCTACCTTCCCTCCTCCTGTACCTCC
CCCAGATGGTGGAAGCTTACGAAGACCGCTCCGCCAGGGCCATCTGCAAC
GTCGGGTTTTCTCCCGGTCCAGGGCAGCAGCCCGTAATTTTTACTGGTAT
CACATACGGCGAAATTGTTCTCCCGGAAGAGGACGACAACGGGTTTGGAT
GGGATACTTGCTTTCGTCCTTCTGGGTTCACCACCACTTTCTCGAAGATG
ACGGTCAATGAGAAGAATGCCATTTCTCACCGCAGTTTGGCGTTGCGCCA
ATTCCAACAATACATAGCAGATAATTGGGGCGAGGGAGGATTTGATGAAA
GGGGTGTATTCAAGTAGGCATGGCTCTGGTCGCACTCACCAGAGCCCGTA
TTAACTGTCGATTGAGTTAACATATGGAGTCATAGTCTCATTTTGGTTTT
CATTTTGACTTGCCCGAGAGCAGCAGCGGTAATATTTGATTCTGATGAGG
CAATCAAAGCTTCTGCTGTTCAAATATCAAATATCGTGTGTGTTCAAGAG
TCAAGATGAGATTAAGATAGGCGAAAAGAAAGATCATTCCAGACCTGGCA
TAGAGAAGAGCGTGGAGGAAGTGAATGGCTTTAAAAATCTAAAAATGGTT
CTACAAAGGACATTTTGCATTCTTAGAGGCCTATTTGAGTCGCAGGGCAT
TACATAGCTTCCCTACAGACTTCTGTACAGCAAAGTGTGGACAACACAAC
ACCCAAAGCATCCAAAGAATAAAGTGGCAGCACAGCAAAAGCCAAAAAAA
AAAGATCGGGTGGCCGCATACCGAAGGATGTCTGTTACACCACCAAGCAG
ACTCGAGTATTCCATCACTGCATGGCTCGTCACGGACCCTCTCGGGTTTG
AGCCTCGCCCCTTGGGGTTCTACTCACGATAGTCACTACCTCTGCTTCAA
GGTGAGATTCCTCTTCTTTCTAAACAATGTCAATATGTTCTTTAACATCT
TAGTGGGAGTCATTCACTTGTTTGTCGGGGCTGACTAGAGACATTTCAAA
AGAAAGAAAGCCTTGGCCCCCTTCCTGAACGTCTTATTACATAACTGTAG
CATGATTGTATATTACACTACTTTCTATTACAGGAGGGTGATGGATCCTA
AGTCAACGACTGAAGTGAGAAAAATCACACTTCTTGCTTTTACTAGATCG
GAAGCATCAGTGCTCGCCTATCTATTTATCAAACATGCTTTTGCTCTCTC
CTCAGCCTCCAATCCCTAGCCTGTCTTCAGCTCAGCCTAAGCTACTTATA
CCGCTCCATTCGGATTGTTTATTTCGCCCGTTTCCTCACAACATAGCTCA
GTGTCCACGTAACTGTCTGGGCATTCCCTTCGGGAAAACGGATCTTCCAC
ACGGTACGGATGTGGCCCAACGATGTGATCGAGTAAATAGACAGAGGTTC
TTCTGTGTGTGAACGTACACGAGGCATGTGCGGCAGATGAAGTCCGTGTG
GTGATCCTTGTACCGATCCCTGCACCTTTTCGGACCCCTCGGGTGCCCCT
TCCAAAACTGTGGTGTCCTCCGATCCAGGCAAGTCCAACCAAATATGGTG
CAGGCCCCCGTCCACCTGCTTGCCTGCGTCAAGCGTCACGCGTACTATCA
CCCGAGTCCCTTTTTCTTCCTTCCTCTTGGAGAGTAACTCCCCCCAATCC
AAACATCTCAACTCCCATCCGCACGTGAAATGCACATCCGAACCTAGGTA
CATAGGTGGCAGCTGTAGTAGCTGCTGCTGTTCCTGAGATGAACACGCGG
CATGTTCCCCGCGTTCATCGATACGCACAGCATATAGGCGCGCCGAGTGA
GGCAACACGCCACCGCCGATTGTTGACAGGGCAGATGCGCTCATGACTGC
ATCGGGTGTGGCATTTAAATCTAACCGCACTCGGAAATATTCGGAGGTCC
AAAACTCGAGCACGTGCAAAGTCAATGGCCCCATCGCGCCCCCAACGACG
CCATCATTGCTGCTGCTGCTGCTGCTGCTGCTGCCGGTAGCCCCGGACAA
CAACGGTCGCAGCAAAGCCTTCCAAGGATAGGTGACTTCCT back to topCoding sequence (CDS) from alignment at scaffold_2:755517..758507- >mRNA_921 ID=mRNA_921|Name=jgi.p|Nanoce1779_2|574653|organism=Nannochloropsis oceanica|type=CDS|length=2484bp|location=Sequence derived from alignment at scaffold_2:755517..758507- (Nannochloropsis oceanica)
ATGGTGGAAGCTTACGAAGACCGCTCCGCCAGGGCCATCTGCAACGTCGG
GTTTTCTCCCGGTCCAGGGCAGCAGCCCGTAATTTTTACTGGTATCACAT
ACGGCGAAATTGTTCTCCCGGAAGAGGACGACAACGGGTTTGGATGGGAT
ACTTGCTTTCGTCCTTCTGGGTTCACCACCACTTTCTCGAAGATGACGGT
CAATGAGAAGAATGCCATTTCTCACCGCAGTTTGGCGTTGCGCCAATTCC
AACAATACATAGCAGATAATTGGGGCGAGGGAGGATTTGATGAAAGGGGT
GTATTCAAGTAGGCGCCATGCCTTGTAGAGGACACCTCGTTGTGCCTCAA
CGCACTCGGCGGGTTACCAGGACCATACATCAAGCACTTCTTGGATGAGT
TGGGAAGCGCGGGATTGTTTAAGATGATGGGGGGGGCGCAAGGCATCCCA
CGGGCGTTGGCACCAGTGGTGCTGCTTTCATTCTGCGTAATTGCACCTTC
TTGGGCATTTGTTCGACCCGTTCCCGCCAGATGCACACTTTCTTCCTCTC
TTTCCGGCCACACCATAATCGCAAGTGCCACCCACGTTCCTGGAAGCACA
CTGGCATGCTCAACGCCTACGGCAGCCAGCTACAGTCAAAAAAGGGCAGT
TATAAAATTCATTACGAGCAATCCTCTTAAAACGCGTGAAGTGCAAGCCC
TATTGGCGGAAGGAGGTCTTCGAGTGCCCTTCGACATTCAGACTCTTGAT
ATACAGCTGCCTGAGCTGCAAGAGTCTCCGCTGGTGATTGCAATTGAAAA
GACTCGGCTAGCCTCAAACAGAGTAAAGATGGTGGAAGCTTACGAAGACC
GCTCCGCCAGGGCCATCTGCAACGTCGGGTTTTCTCCCGGTCCAGGGCAG
CAGCCCGTAATTTTTACTGGTATCACATACGGCGAAATTGTTCTCCCGGA
AGAGGACGACAACGGGTTTGGATGGGATACTTGCTTTCGTCCTTCTGGGT
TCACCACCACTTTCTCGAAGATGACGGTCAATGAGAAGAATGCCATTTCT
CACCGCAGTTTGGCGTTGCGCCAATTCCAACAATACATAGCAGATAATTG
GGGCGAGGGAGGATTTGATGAAAGGGGTGTATTCAAGTAGGCGCCATGCC
TTGTAGAGGACACCTCGTTGTGCCTCAACGCACTCGGCGGGTTACCAGGA
CCATACATCAAGCACTTCTTGGATGAGTTGGGAAGCGCGGGATTGTTTAA
GATGATGGGGGGGGCGCAAGGCATCCCACGGGCGTTGGCACCAGTGGTGC
TGCTTTCATTCTGCGTAATTGCACCTTCTTGGGCATTTGTTCGACCCGTT
CCCGCCAGATGCACACTTTCTTCCTCTCTTTCCGGCCACACCATAATCGC
AAGTGCCACCCACGTTCCTGGAAGCACACTGGCATGCTCAACGCCTACGG
CAGCCAGCTACAGTCAAAAAAGGGCAGTTATAAAATTCATTACGAGCAAT
CCTCTTAAAACGCGTGAAGTGCAAGCCCTATTGGCGGAAGGAGGTCTTCG
AGTGCCCTTCGACATTCAGACTCTTGATATACAGCTGCCTGAGCTGCAAG
AGTCTCCGCTGGTGATTGCAATTGAAAAGACTCGGCTAGCCTCAAACAGA
GTAAAGATGGTGGAAGCTTACGAAGACCGCTCCGCCAGGGCCATCTGCAA
CGTCGGGTTTTCTCCCGGTCCAGGGCAGCAGCCCGTAATTTTTACTGGTA
TCACATACGGCGAAATTGTTCTCCCGGAAGAGGACGACAACGGGTTTGGA
TGGGATACTTGCTTTCGTCCTTCTGGGTTCACCACCACTTTCTCGAAGAT
GACGGTCAATGAGAAGAATGCCATTTCTCACCGCAGTTTGGCGTTGCGCC
AATTCCAACAATACATAGCAGATAATTGGGGCGAGGGAGGATTTGATGAA
AGGGGTGTATTCAAGTAGGCGCCATGCCTTGTAGAGGACACCTCGTTGTG
CCTCAACGCACTCGGCGGGTTACCAGGACCATACATCAAGCACTTCTTGG
ATGAGTTGGGAAGCGCGGGATTGTTTAAGATGATGGGGGGGGCGCAAGGC
ATCCCACGGGCGTTGGCACCAGTGGTGCTGCTTTCATTCTGCGTAATTGC
ACCTTCTTGGGCATTTGTTCGACCCGTTCCCGCCAGATGCACACTTTCTT
CCTCTCTTTCCGGCCACACCATAATCGCAAGTGCCACCCACGTTCCTGGA
AGCACACTGGCATGCTCAACGCCTACGGCAGCCAGCTACAGTCAAAAAAG
GGCAGTTATAAAATTCATTACGAGCAATCCTCTTAAAACGCGTGAAGTGC
AAGCCCTATTGGCGGAAGGAGGTCTTCGAGTGCCCTTCGACATTCAGACT
CTTGATATACAGCTGCCTGAGCTGCAAGAGTCTCCGCTGGTGATTGCAAT
TGAAAAGACTCGGCTAGCCTCAAACAGAGTAAAG back to top
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