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Properties
| Property Name | Value |
|---|
| TranscriptId | 606962 |
| Track | FilteredModels2 |
| ProteinId | 606876 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:214805..217232 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9204 ID=mRNA_9204|Name=jgi.p|Nanoce1779_2|606876|organism=Nannochloropsis oceanica|type=mRNA|length=1997bp
ACAGAAACGCAACTACCTGATCTAAACGAAAGACATGGCGACCAGTACGA
ATAGCAGCAGCAGCAGCACGGCCTCTGCCAATCCCGACCAAGCGGCACAG
CTGAACGACGAGGAATTCGAGGAGCACGACCTGCCCAAGTACCTGAAAAT
CGCCGAGTCTGCTGCCCTCCAAGCCGGAAAGTTCATCCGTGCCTCCCTCG
AACGCCGGGGCCGCTACGGCCTGACCATCAACGACAAAACCCGAGCTGGC
TCCGCTGCTGTGGACCTGGTCACTGAAGTTGACCTACAATCTGAGGAGAT
CATCATCCCGTCGATCCGGAAGGCCGTGAGTGGATCCGGTCGCCGGCATG
TGTTCGTTGGGGAGGAGTCGGCCTTCTTGACGGGGACGAACGAGCTGACG
GATGAGTGCACGTGGTTTGTGGATGGGATCGATGGAACGACCAATTTCAT
TCACGGTTACCCTTTTGTCACGGTCTCCATCGGCCTTCTAATCAAGAAAC
AGCCTGTGGTGGGAGTGGTCTACAACCCTTTTCTTGACGAGCTCTACACT
GCCCATCACCGCGGAGGTGCCTTCTTGAACGGCCAACGGCTCCAGGTCAG
CAGCGCCAGCAGCATCCACCATTCTATGGTGGCCACGACCCTCGGCTCCT
CCCGCGACCGCCCTTATCTCAACAAACTGTTGTTCCGTCTCCGGGCTTTG
CTTTTGCATAAATTGCAAGCCTTCCGCGTCTCGGGCAGCACGTGCCAGAA
CCTGGCCCATGTAGCCAGCGGGCGCCTGGATTGCTACTATGACGAGTGCG
GGTTCGGGGGACCGTGGGACATCGCGGCAGGCGTGGTGCTTGTGAAGGAA
GCGGGGGGCATCTTGCGAGGGATCGATGGCGGAGAGTTCACGTTCAAGAT
GGGACAGGGGGACCTGGTGTGCGGGAATGCGGGCATTGTGGAGGAGGTGG
TGGGCGCGATCAGAGAGGCAGACCGGAAAATGTGGAGGAAGAATGTCATG
GTGCAATTGAGGGGATGGGGGAGCATTGGGGTGGTGGTGCTGAGTGCGTG
TGCGGTGTCGCTCTTCCTGGGTGGAAAGAAGAGCCATCCGTAGGCTCCTT
GCCTTCCCCCCCTCCCTCGCTTCCTTCCGATTGAAAGGGGGAAAGGAAGG
CGAGGAGGACGAACGCCACAGTGCTTTGGATGGAGGTCTAAAGGGACGTG
CAGTGGAGCTGCTAAACGCGTTTACCGTTCCTCCTTGCTGGGAGGAGGAG
GAGGGGGAGACAGAGCCACGGTGACGAAGGGGTGGGGGTGGAAAGGACAA
GGGAAGGGAAGGAGGGAAGATACTTTGTGTCTTTAAGAATGATCCGCCAT
GTGGTTTTTGGTGAGATATGACAATAGTGGGGGAGGCAGGGAAAGAGAGA
AAAACGGAGGGAGGGATGTACATTTAAAAGGAGTGGGAGTGAGGGTGGAG
GGGCGGGGAGGAGCACGCGAGGGTTGTTTCTGTACATGTTTGTCTATTCG
GCTGTAGGGTAAAGGGAGAGAAGTAATGAGAAAAGGAGGGAGAGCTTGAA
GTCGAAGGAGGAGAAGAAGATGGATCGTCCGTGATAGCAGTAGAGTAGCT
ATAAGGGTAGCTATAACAAGCAAGGATAGGAGTAGCAACAAGAGCGGACA
GAGAGGGGACCGTCGGAAAAACGATGCTGTGGTTTTTGCGGCCACAAAGG
CCCTGCTTTTAAGCCTCTTGTCTCTTGCTAAGAACATCAAACATCCATTT
TCCATTTCGTTGCTCTCCCCTCCACATCTTGAAGCCAGAAAAAGATAGAA
ACAAGAACTCGTTTGTATCTCTTTTGTTGAAACCTTGATCCATTTACTCA
TTTATTTCCCGACGTTCAAAATTCTAATGGGTATCATACCAACGTCGGTC
CTCTTTCTCCCCCCTCCGGGTGCAAAACCACCGTCTGCGGAGGCCTGCTT
CCTCCCCCCTCCCTCCCTCCCTCCTCTCGCTCCGACATGGCCCGGTT back to topprotein sequence of jgi.p|Nanoce1779_2|606876 >mRNA_9204-protein ID=mRNA_9204-protein|Name=jgi.p|Nanoce1779_2|606876|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MATSTNSSSSSTASANPDQAAQLNDEEFEEHDLPKYLKIAESAALQAGKF
IRASLERRGRYGLTINDKTRAGSAAVDLVTEVDLQSEEIIIPSIRKAVSG
SGRRHVFVGEESAFLTGTNELTDECTWFVDGIDGTTNFIHGYPFVTVSIG
LLIKKQPVVGVVYNPFLDELYTAHHRGGAFLNGQRLQVSSASSIHHSMVA
TTLGSSRDRPYLNKLLFRLRALLLHKLQAFRVSGSTCQNLAHVASGRLDC
YYDECGFGGPWDIAAGVVLVKEAGGILRGIDGGEFTFKMGQGDLVCGNAG
IVEEVVGAIREADRKMWRKNVMVQLRGWGSIGVVVLSACAVSLFLGGKKS
HP* back to topmRNA from alignment at scaffold_36:214805..217232- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9204 ID=mRNA_9204|Name=jgi.p|Nanoce1779_2|606876|organism=Nannochloropsis oceanica|type=mRNA|length=2428bp|location=Sequence derived from alignment at scaffold_36:214805..217232- (Nannochloropsis oceanica)
ACAGAAACGCAACTACCTGATCTAAACGAAAGACATGGCGACCAGTACGA
ATAGCAGCAGCAGCAGCACGGCCTCTGCCAATCCCGACCAAGCGGCACAG
CTGAACGACGAGGAATGTAAGTCGATGACCTCGTTGTAGTCATTGCAACG
CATTTGTGCTTCTCAATTAAATACACCTGTCATGCGACTCTCCCTCCCTA
TCACGACTCTCTCTTTCTTTCCGTCCGCACAGTCGAGGAGCACGACCTGC
CCAAGTACCTGAAAATCGCCGAGTCTGCTGCCCTCCAAGCCGGAAAGTAA
GAGTACTTGGAGAGGGGGTGCGCGTAGGGGGGAAATTAGACGTGTGAAGA
GCTGGTCCATGAATTAACTGTGGTTTTAGCATCGTTGTATTAGCCCTATT
AACGGAATGAAAGAAGATTTACTAAACCTACTGCCTCTGACCTCTTGTTT
CCCCACAGGTTCATCCGTGCCTCCCTCGAACGCCGGGGCCGCTACGGCCT
GACCATCAACGACAAAACCCGAGCTGGCTCCGCTGCTGTGGACCTGGTCA
CTGAAGTTGACCTACAATCTGAGGAGATCATCATCCCGTCGATCCGGAAG
GCCGTGAGTGGATCCGGTCGCCGGCATGTGTTCGTTGGGGAGGAGTCGGC
CTTCTTGACGGGGACGAACGAGCTGACGGATGAGTGCACGTGGTTTGTGG
ATGGGATCGATGGAACGACCAATTTCATTCACGGTTACCCTTTTGTCACG
GTAGGTCTTGATTCGTTCAATTTTTTGTCTATTCATCCATTTATTGATCG
AGTCATCCGTACATTCATTCTCACTACACATGAATTGGTAGATTTCTTAT
TATTTATTTAACATTCGAGTACTTCGATCCTCATTTCAAACACCCACGAC
CAGGTCTCCATCGGCCTTCTAATCAAGAAACAGCCTGTGGTGGGAGTGGT
CTACAACCCTTTTCTTGACGAGCTCTACACTGCCCATCACCGCGGAGGTG
CCTTCTTGAACGGCCAACGGCTCCAGGTCAGCAGCGCCAGCAGCATCCAC
CATTCTATGGTGGCCACGACCCTCGGCTCCTCCCGCGACCGCCCTTATCT
CAACAAACTGTTGTTCCGTCTCCGGGCTTTGCTTTTGCATAAATTGCAAG
CCTTCCGCGTCTCGGGCAGCACGTGCCAGAACCTGGCCCATGTAGCCAGC
GGGCGCCTGGATTGCTACTATGACGAGTGCGGGTTCGGGGGACCGTGGGA
CATCGCGGCAGGCGTGGTGCTTGTGAAGGAAGCGGGGGGCATCTTGCGAG
GGATCGATGGCGGAGAGTTCACGTTCAAGATGGGACAGGGGGACCTGGTG
TGCGGGAATGCGGGCATTGTGGAGGAGGTGGTGGGCGCGATCAGAGAGGC
AGACCGGAAAATGTGGAGGAAGAATGTCATGGTGCAATTGAGGGGATGGG
GGAGCATTGGGGTGGTGGTGCTGAGTGCGTGTGCGGTGTCGCTCTTCCTG
GGTGGAAAGAAGAGCCATCCGTAGGCTCCTTGCCTTCCCCCCCTCCCTCG
CTTCCTTCCGATTGAAAGGGGGAAAGGAAGGCGAGGAGGACGAACGCCAC
AGTGCTTTGGATGGAGGTCTAAAGGGACGTGCAGTGGAGCTGCTAAACGC
GTTTACCGTTCCTCCTTGCTGGGAGGAGGAGGAGGGGGAGACAGAGCCAC
GGTGACGAAGGGGTGGGGGTGGAAAGGACAAGGGAAGGGAAGGAGGGAAG
ATACTTTGTGTCTTTAAGAATGATCCGCCATGTGGTTTTTGGTGAGATAT
GACAATAGTGGGGGAGGCAGGGAAAGAGAGAAAAACGGAGGGAGGGATGT
ACATTTAAAAGGAGTGGGAGTGAGGGTGGAGGGGCGGGGAGGAGCACGCG
AGGGTTGTTTCTGTACATGTTTGTCTATTCGGCTGTAGGGTAAAGGGAGA
GAAGTAATGAGAAAAGGAGGGAGAGCTTGAAGTCGAAGGAGGAGAAGAAG
ATGGATCGTCCGTGATAGCAGTAGAGTAGCTATAAGGGTAGCTATAACAA
GCAAGGATAGGAGTAGCAACAAGAGCGGACAGAGAGGGGACCGTCGGAAA
AACGATGCTGTGGTTTTTGCGGCCACAAAGGCCCTGCTTTTAAGCCTCTT
GTCTCTTGCTAAGAACATCAAACATCCATTTTCCATTTCGTTGCTCTCCC
CTCCACATCTTGAAGCCAGAAAAAGATAGAAACAAGAACTCGTTTGTATC
TCTTTTGTTGAAACCTTGATCCATTTACTCATTTATTTCCCGACGTTCAA
AATTCTAATGGGTATCATACCAACGTCGGTCCTCTTTCTCCCCCCTCCGG
GTGCAAAACCACCGTCTGCGGAGGCCTGCTTCCTCCCCCCTCCCTCCCTC
CCTCCTCTCGCTCCGACATGGCCCGGTT back to topCoding sequence (CDS) from alignment at scaffold_36:214805..217232- >mRNA_9204 ID=mRNA_9204|Name=jgi.p|Nanoce1779_2|606876|organism=Nannochloropsis oceanica|type=CDS|length=4236bp|location=Sequence derived from alignment at scaffold_36:214805..217232- (Nannochloropsis oceanica)
GTCTCCATCGGCCTTCTAATCAAGAAACAGCCTGTGGTGGGAGTGGTCTA
CAACCCTTTTCTTGACGAGCTCTACACTGCCCATCACCGCGGAGGTGCCT
TCTTGAACGGCCAACGGCTCCAGGTCAGCAGCGCCAGCAGCATCCACCAT
TCTATGGTGGCCACGACCCTCGGCTCCTCCCGCGACCGCCCTTATCTCAA
CAAACTGTTGTTCCGTCTCCGGGCTTTGCTTTTGCATAAATTGCAAGCCT
TCCGCGTCTCGGGCAGCACGTGCCAGAACCTGGCCCATGTAGCCAGCGGG
CGCCTGGATTGCTACTATGACGAGTGCGGGTTCGGGGGACCGTGGGACAT
CGCGGCAGGCGTGGTGCTTGTGAAGGAAGCGGGGGGCATCTTGCGAGGGA
TCGATGGCGGAGAGTTCACGTTCAAGATGGGACAGGGGGACCTGGTGTGC
GGGAATGCGGGCATTGTGGAGGAGGTGGTGGGCGCGATCAGAGAGGCAGA
CCGGAAAATGTGGAGGAAGAATGTCATGGTGCAATTGAGGGGATGGGGGA
GCATTGGGGTGGTGGTGCTGAGTGCGTGTGCGGTGTCGCTCTTCCTGGGT
GGAAAGAAGAGCCATCCGTAGGTTCATCCGTGCCTCCCTCGAACGCCGGG
GCCGCTACGGCCTGACCATCAACGACAAAACCCGAGCTGGCTCCGCTGCT
GTGGACCTGGTCACTGAAGTTGACCTACAATCTGAGGAGATCATCATCCC
GTCGATCCGGAAGGCCGTGAGTGGATCCGGTCGCCGGCATGTGTTCGTTG
GGGAGGAGTCGGCCTTCTTGACGGGGACGAACGAGCTGACGGATGAGTGC
ACGTGGTTTGTGGATGGGATCGATGGAACGACCAATTTCATTCACGGTTA
CCCTTTTGTCACGTCGAGGAGCACGACCTGCCCAAGTACCTGAAAATCGC
CGAGTCTGCTGCCCTCCAAGCCGGAAAATGGCGACCAGTACGAATAGCAG
CAGCAGCAGCACGGCCTCTGCCAATCCCGACCAAGCGGCACAGCTGAACG
ACGAGGAATGTCTCCATCGGCCTTCTAATCAAGAAACAGCCTGTGGTGGG
AGTGGTCTACAACCCTTTTCTTGACGAGCTCTACACTGCCCATCACCGCG
GAGGTGCCTTCTTGAACGGCCAACGGCTCCAGGTCAGCAGCGCCAGCAGC
ATCCACCATTCTATGGTGGCCACGACCCTCGGCTCCTCCCGCGACCGCCC
TTATCTCAACAAACTGTTGTTCCGTCTCCGGGCTTTGCTTTTGCATAAAT
TGCAAGCCTTCCGCGTCTCGGGCAGCACGTGCCAGAACCTGGCCCATGTA
GCCAGCGGGCGCCTGGATTGCTACTATGACGAGTGCGGGTTCGGGGGACC
GTGGGACATCGCGGCAGGCGTGGTGCTTGTGAAGGAAGCGGGGGGCATCT
TGCGAGGGATCGATGGCGGAGAGTTCACGTTCAAGATGGGACAGGGGGAC
CTGGTGTGCGGGAATGCGGGCATTGTGGAGGAGGTGGTGGGCGCGATCAG
AGAGGCAGACCGGAAAATGTGGAGGAAGAATGTCATGGTGCAATTGAGGG
GATGGGGGAGCATTGGGGTGGTGGTGCTGAGTGCGTGTGCGGTGTCGCTC
TTCCTGGGTGGAAAGAAGAGCCATCCGTAGGTTCATCCGTGCCTCCCTCG
AACGCCGGGGCCGCTACGGCCTGACCATCAACGACAAAACCCGAGCTGGC
TCCGCTGCTGTGGACCTGGTCACTGAAGTTGACCTACAATCTGAGGAGAT
CATCATCCCGTCGATCCGGAAGGCCGTGAGTGGATCCGGTCGCCGGCATG
TGTTCGTTGGGGAGGAGTCGGCCTTCTTGACGGGGACGAACGAGCTGACG
GATGAGTGCACGTGGTTTGTGGATGGGATCGATGGAACGACCAATTTCAT
TCACGGTTACCCTTTTGTCACGTCGAGGAGCACGACCTGCCCAAGTACCT
GAAAATCGCCGAGTCTGCTGCCCTCCAAGCCGGAAAATGGCGACCAGTAC
GAATAGCAGCAGCAGCAGCACGGCCTCTGCCAATCCCGACCAAGCGGCAC
AGCTGAACGACGAGGAATGTCTCCATCGGCCTTCTAATCAAGAAACAGCC
TGTGGTGGGAGTGGTCTACAACCCTTTTCTTGACGAGCTCTACACTGCCC
ATCACCGCGGAGGTGCCTTCTTGAACGGCCAACGGCTCCAGGTCAGCAGC
GCCAGCAGCATCCACCATTCTATGGTGGCCACGACCCTCGGCTCCTCCCG
CGACCGCCCTTATCTCAACAAACTGTTGTTCCGTCTCCGGGCTTTGCTTT
TGCATAAATTGCAAGCCTTCCGCGTCTCGGGCAGCACGTGCCAGAACCTG
GCCCATGTAGCCAGCGGGCGCCTGGATTGCTACTATGACGAGTGCGGGTT
CGGGGGACCGTGGGACATCGCGGCAGGCGTGGTGCTTGTGAAGGAAGCGG
GGGGCATCTTGCGAGGGATCGATGGCGGAGAGTTCACGTTCAAGATGGGA
CAGGGGGACCTGGTGTGCGGGAATGCGGGCATTGTGGAGGAGGTGGTGGG
CGCGATCAGAGAGGCAGACCGGAAAATGTGGAGGAAGAATGTCATGGTGC
AATTGAGGGGATGGGGGAGCATTGGGGTGGTGGTGCTGAGTGCGTGTGCG
GTGTCGCTCTTCCTGGGTGGAAAGAAGAGCCATCCGTAGGTTCATCCGTG
CCTCCCTCGAACGCCGGGGCCGCTACGGCCTGACCATCAACGACAAAACC
CGAGCTGGCTCCGCTGCTGTGGACCTGGTCACTGAAGTTGACCTACAATC
TGAGGAGATCATCATCCCGTCGATCCGGAAGGCCGTGAGTGGATCCGGTC
GCCGGCATGTGTTCGTTGGGGAGGAGTCGGCCTTCTTGACGGGGACGAAC
GAGCTGACGGATGAGTGCACGTGGTTTGTGGATGGGATCGATGGAACGAC
CAATTTCATTCACGGTTACCCTTTTGTCACGTCGAGGAGCACGACCTGCC
CAAGTACCTGAAAATCGCCGAGTCTGCTGCCCTCCAAGCCGGAAAATGGC
GACCAGTACGAATAGCAGCAGCAGCAGCACGGCCTCTGCCAATCCCGACC
AAGCGGCACAGCTGAACGACGAGGAATGTCTCCATCGGCCTTCTAATCAA
GAAACAGCCTGTGGTGGGAGTGGTCTACAACCCTTTTCTTGACGAGCTCT
ACACTGCCCATCACCGCGGAGGTGCCTTCTTGAACGGCCAACGGCTCCAG
GTCAGCAGCGCCAGCAGCATCCACCATTCTATGGTGGCCACGACCCTCGG
CTCCTCCCGCGACCGCCCTTATCTCAACAAACTGTTGTTCCGTCTCCGGG
CTTTGCTTTTGCATAAATTGCAAGCCTTCCGCGTCTCGGGCAGCACGTGC
CAGAACCTGGCCCATGTAGCCAGCGGGCGCCTGGATTGCTACTATGACGA
GTGCGGGTTCGGGGGACCGTGGGACATCGCGGCAGGCGTGGTGCTTGTGA
AGGAAGCGGGGGGCATCTTGCGAGGGATCGATGGCGGAGAGTTCACGTTC
AAGATGGGACAGGGGGACCTGGTGTGCGGGAATGCGGGCATTGTGGAGGA
GGTGGTGGGCGCGATCAGAGAGGCAGACCGGAAAATGTGGAGGAAGAATG
TCATGGTGCAATTGAGGGGATGGGGGAGCATTGGGGTGGTGGTGCTGAGT
GCGTGTGCGGTGTCGCTCTTCCTGGGTGGAAAGAAGAGCCATCCGTAGGT
TCATCCGTGCCTCCCTCGAACGCCGGGGCCGCTACGGCCTGACCATCAAC
GACAAAACCCGAGCTGGCTCCGCTGCTGTGGACCTGGTCACTGAAGTTGA
CCTACAATCTGAGGAGATCATCATCCCGTCGATCCGGAAGGCCGTGAGTG
GATCCGGTCGCCGGCATGTGTTCGTTGGGGAGGAGTCGGCCTTCTTGACG
GGGACGAACGAGCTGACGGATGAGTGCACGTGGTTTGTGGATGGGATCGA
TGGAACGACCAATTTCATTCACGGTTACCCTTTTGTCACGTCGAGGAGCA
CGACCTGCCCAAGTACCTGAAAATCGCCGAGTCTGCTGCCCTCCAAGCCG
GAAAATGGCGACCAGTACGAATAGCAGCAGCAGCAGCACGGCCTCTGCCA
ATCCCGACCAAGCGGCACAGCTGAACGACGAGGAAT back to top
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