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Properties
| Property Name | Value |
|---|
| TranscriptId | 606953 |
| Track | FilteredModels2 |
| ProteinId | 606867 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:211859..213658 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9202 ID=mRNA_9202|Name=jgi.p|Nanoce1779_2|606867|organism=Nannochloropsis oceanica|type=mRNA|length=1431bp
ACAGCTTGCCAGCGCAACCAACCATGGCCACCTTCATATCGAGTCCAATG
ACGCCTCTGGAGAAGGAGGAAGCCTTGACTCTTTTTGAAGAGTTGCTCAG
GTTCCCGACCATCTCCTTTGCTGGTCCCACCAACGGGAGCTACCGCGCCT
GTGCCCAGTGGCTGGTGAAGACGCTAAGCGACTTGGGTTTAGAGACACAG
ATTTTTGAGCTTGTCCCCAACAAGCCCGTGGTCCTGGCCAGCTGGATCGG
CTCCGAGCCCGAGCTGCCCTCCCTCTTGCTCAACTCCCACTATGACGTGG
TACCCGCTCTCATCGACTACTGGCACACCGACCCCTTCACGCCGGTGCGG
AAGGATGGGAAGATTTATGCGCGCGGCACCCAAGACATGAAATGTGTCTG
CGCCCAATACATCCTCGCCATCAAGCGCCTAAAGTCCTTTCACGACCCCT
CCCTCCCACCCTTCCTCCCCCGCCGCTCAATCCACCTCTCCTTCGTTCCC
GACGAGGAGATCGGCGGTGAAGACGGCATGGGCCCCTTCCTCCTGACCTC
CCAATTCAAAAATTTGAATGTTGGATTGGCGCTAGACGAGGGGATCGCGA
ACCCGTTGGATGAATATACGTTTTTCTATGGAGAGAGGATGCCGTTGTGG
ATAAGAGTAAAGGCACAAGGGAAAACGGGCCATGGCTCTCGGTTCATCCC
TGGGACCGCAGTTAGTAAGATCATTGAAGTGGCGAATAAGGCCTTGGCTT
TTCGGGTCGTGCAGGAAAAAACATTGGGGTATACCAGCCCACATTCTCAT
CAAGGAGAGGGAGGGGGGGAGGCAGGGAATTTTGGAGGGGGTTGTAAGCA
CGCTCAGGCCAAAAAATTGGGGGACGTGACGAGTTTGAATCTGACAGTGT
TGAAGGCAGGGGTAAGCATGGATGGTGGGGAAACCTTTGCGTTTAATGTA
ATTCCGCAGGAGGCAGAGGCTGGGTTTGACATACGCGTGCCGCCCGGTGT
GTCATTTGCAGAGATCAGGAAGTTGTTAGATGAGTGGACGAGTGAAGACG
GGGTCAGCTGGGAATTCGCCCAGGAGGGAGGGAAAGATCCGTTGCTTGAC
CATCACATCACCTCGATTGATCGGGAACAGAATCCATGGTTCTCAATTTT
TTACGACGCCTTGGCCAGTCGGGGGGTCAAAATAACCCCTGAGGTATTTC
CTGCCTCCACGGACGCGCGCTTTGTCAGGGCGATGGGGTTGGCGGCATTT
GGGTTTAGCCCGATGCGGAAGACGGAGATGTTGTTGCATGAGCATAATGA
GTGGATTGGGGAGGACATGTTTGTCGAGGGGGTAGGGGTATATGAGACGT
TGATTCGGTCGTTGGGTAGCGCCGAGAAATTTCAAGGGGAGGGAGTGGCC
AAAAAGAAATGAAGAAAAAAAATGACATGAA back to topprotein sequence of jgi.p|Nanoce1779_2|606867 >mRNA_9202-protein ID=mRNA_9202-protein|Name=jgi.p|Nanoce1779_2|606867|organism=Nannochloropsis oceanica|type=polypeptide|length=463bp
MATFISSPMTPLEKEEALTLFEELLRFPTISFAGPTNGSYRACAQWLVKT
LSDLGLETQIFELVPNKPVVLASWIGSEPELPSLLLNSHYDVVPALIDYW
HTDPFTPVRKDGKIYARGTQDMKCVCAQYILAIKRLKSFHDPSLPPFLPR
RSIHLSFVPDEEIGGEDGMGPFLLTSQFKNLNVGLALDEGIANPLDEYTF
FYGERMPLWIRVKAQGKTGHGSRFIPGTAVSKIIEVANKALAFRVVQEKT
LGYTSPHSHQGEGGGEAGNFGGGCKHAQAKKLGDVTSLNLTVLKAGVSMD
GGETFAFNVIPQEAEAGFDIRVPPGVSFAEIRKLLDEWTSEDGVSWEFAQ
EGGKDPLLDHHITSIDREQNPWFSIFYDALASRGVKITPEVFPASTDARF
VRAMGLAAFGFSPMRKTEMLLHEHNEWIGEDMFVEGVGVYETLIRSLGSA
EKFQGEGVAKKK* back to topmRNA from alignment at scaffold_36:211859..213658- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9202 ID=mRNA_9202|Name=jgi.p|Nanoce1779_2|606867|organism=Nannochloropsis oceanica|type=mRNA|length=1800bp|location=Sequence derived from alignment at scaffold_36:211859..213658- (Nannochloropsis oceanica)
ACAGCTTGCCAGCGCAACCAACCATGGCCACCTTCATATCGAGTCCAATG
ACGCCTCTGGAGAAGGAGGAAGCCTTGACTCTTTTTGAAGAGTTGCTCAG
GTTCCCGACCATCTCCTTTGCTGGTCCCACCAACGGGAGCTACCGCGCCT
GTGCCCAGTGGCTGGTGAAGACGCTAAGCGACTTGGGTTTAGAGACACAG
GTAAGAAAGATCATGGTATGGGGCGTGTGTGAGTGTTTATGACTTTGCTC
GGATCGGTGCAACGGCGCAAGTCGAATTGGACCATCATCACACCACGATT
TCCTACACCCCGATTCCAACCACCTGCCCAAACCTCCCCCTCCTCTAATC
TTTCAGTTGCGTACATCATGTCTCCTTTTACCTTTCAATCTTTGCACTAT
CATTATCAGATTTTTGAGCTTGTCCCCAACAAGCCCGTGGTCCTGGCCAG
CTGGATCGGCTCCGAGCCCGAGCTGCCCTCCCTCTTGCTCAACTCCCACT
ATGACGTGGTACCCGCTCTCATCGACTACTGGCACACCGACCCCTTCACG
CCGGTGCGGAAGGATGGGAAGATTTATGCGCGGTATGCAACATTTAAAGA
GATAGGTGCTTCTTATTTCACTGTACTTTTGACTCCCAGTCGTCCTCACG
TGCTCCACAAGGTAATCGACCACTCGATTCACGAACGCAATCTCTTCCCC
TCCCTCCGCCATTTTTCCTCCCTCCACCTTCCCCCAACACAGCGGCACCC
AAGACATGAAATGTGTCTGCGCCCAATACATCCTCGCCATCAAGCGCCTA
AAGTCCTTTCACGACCCCTCCCTCCCACCCTTCCTCCCCCGCCGCTCAAT
CCACCTCTCCTTCGTTCCCGACGAGGAGATCGGCGGTGAAGACGGCATGG
GCCCCTTCCTCCTGACCTCCCAATTCAAAAATTTGAATGTTGGATTGGCG
CTAGACGAGGGGATCGCGAACCCGTTGGATGAATATACGTTTTTCTATGG
AGAGAGGATGCCGTTGTGGATAAGAGTAAAGGCACAAGGGAAAACGGGCC
ATGGCTCTCGGTTCATCCCTGGGACCGCAGTTAGTAAGATCATTGAAGTG
GCGAATAAGGCCTTGGCTTTTCGGGTCGTGCAGGAAAAAACATTGGGGTA
TACCAGCCCACATTCTCATCAAGGAGAGGGAGGGGGGGAGGCAGGGAATT
TTGGAGGGGGTTGTAAGCACGCTCAGGCCAAAAAATTGGGGGACGTGACG
AGTTTGAATCTGACAGTGTTGAAGGCAGGGGTAAGCATGGATGGTGGGGA
AACCTTTGCGTTTAATGTAATTCCGCAGGAGGCAGAGGCTGGGTTTGACA
TACGCGTGCCGCCCGGTGTGTCATTTGCAGAGATCAGGAAGTTGTTAGAT
GAGTGGACGAGTGAAGACGGGGTCAGCTGGGAATTCGCCCAGGAGGGAGG
GAAAGATCCGTTGCTTGACCATCACATCACCTCGATTGATCGGGAACAGA
ATCCATGGTTCTCAATTTTTTACGACGCCTTGGCCAGTCGGGGGGTCAAA
ATAACCCCTGAGGTATTTCCTGCCTCCACGGACGCGCGCTTTGTCAGGGC
GATGGGGTTGGCGGCATTTGGGTTTAGCCCGATGCGGAAGACGGAGATGT
TGTTGCATGAGCATAATGAGTGGATTGGGGAGGACATGTTTGTCGAGGGG
GTAGGGGTATATGAGACGTTGATTCGGTCGTTGGGTAGCGCCGAGAAATT
TCAAGGGGAGGGAGTGGCCAAAAAGAAATGAAGAAAAAAAATGACATGAA
back to topCoding sequence (CDS) from alignment at scaffold_36:211859..213658- >mRNA_9202 ID=mRNA_9202|Name=jgi.p|Nanoce1779_2|606867|organism=Nannochloropsis oceanica|type=CDS|length=4167bp|location=Sequence derived from alignment at scaffold_36:211859..213658- (Nannochloropsis oceanica)
CGGCACCCAAGACATGAAATGTGTCTGCGCCCAATACATCCTCGCCATCA
AGCGCCTAAAGTCCTTTCACGACCCCTCCCTCCCACCCTTCCTCCCCCGC
CGCTCAATCCACCTCTCCTTCGTTCCCGACGAGGAGATCGGCGGTGAAGA
CGGCATGGGCCCCTTCCTCCTGACCTCCCAATTCAAAAATTTGAATGTTG
GATTGGCGCTAGACGAGGGGATCGCGAACCCGTTGGATGAATATACGTTT
TTCTATGGAGAGAGGATGCCGTTGTGGATAAGAGTAAAGGCACAAGGGAA
AACGGGCCATGGCTCTCGGTTCATCCCTGGGACCGCAGTTAGTAAGATCA
TTGAAGTGGCGAATAAGGCCTTGGCTTTTCGGGTCGTGCAGGAAAAAACA
TTGGGGTATACCAGCCCACATTCTCATCAAGGAGAGGGAGGGGGGGAGGC
AGGGAATTTTGGAGGGGGTTGTAAGCACGCTCAGGCCAAAAAATTGGGGG
ACGTGACGAGTTTGAATCTGACAGTGTTGAAGGCAGGGGTAAGCATGGAT
GGTGGGGAAACCTTTGCGTTTAATGTAATTCCGCAGGAGGCAGAGGCTGG
GTTTGACATACGCGTGCCGCCCGGTGTGTCATTTGCAGAGATCAGGAAGT
TGTTAGATGAGTGGACGAGTGAAGACGGGGTCAGCTGGGAATTCGCCCAG
GAGGGAGGGAAAGATCCGTTGCTTGACCATCACATCACCTCGATTGATCG
GGAACAGAATCCATGGTTCTCAATTTTTTACGACGCCTTGGCCAGTCGGG
GGGTCAAAATAACCCCTGAGGTATTTCCTGCCTCCACGGACGCGCGCTTT
GTCAGGGCGATGGGGTTGGCGGCATTTGGGTTTAGCCCGATGCGGAAGAC
GGAGATGTTGTTGCATGAGCATAATGAGTGGATTGGGGAGGACATGTTTG
TCGAGGGGGTAGGGGTATATGAGACGTTGATTCGGTCGTTGGGTAGCGCC
GAGAAATTTCAAGGGGAGGGAGTGGCCAAAAAGAAATGAATTTTTGAGCT
TGTCCCCAACAAGCCCGTGGTCCTGGCCAGCTGGATCGGCTCCGAGCCCG
AGCTGCCCTCCCTCTTGCTCAACTCCCACTATGACGTGGTACCCGCTCTC
ATCGACTACTGGCACACCGACCCCTTCACGCCGGTGCGGAAGGATGGGAA
GATTTATGCGCGATGGCCACCTTCATATCGAGTCCAATGACGCCTCTGGA
GAAGGAGGAAGCCTTGACTCTTTTTGAAGAGTTGCTCAGGTTCCCGACCA
TCTCCTTTGCTGGTCCCACCAACGGGAGCTACCGCGCCTGTGCCCAGTGG
CTGGTGAAGACGCTAAGCGACTTGGGTTTAGAGACACAGCGGCACCCAAG
ACATGAAATGTGTCTGCGCCCAATACATCCTCGCCATCAAGCGCCTAAAG
TCCTTTCACGACCCCTCCCTCCCACCCTTCCTCCCCCGCCGCTCAATCCA
CCTCTCCTTCGTTCCCGACGAGGAGATCGGCGGTGAAGACGGCATGGGCC
CCTTCCTCCTGACCTCCCAATTCAAAAATTTGAATGTTGGATTGGCGCTA
GACGAGGGGATCGCGAACCCGTTGGATGAATATACGTTTTTCTATGGAGA
GAGGATGCCGTTGTGGATAAGAGTAAAGGCACAAGGGAAAACGGGCCATG
GCTCTCGGTTCATCCCTGGGACCGCAGTTAGTAAGATCATTGAAGTGGCG
AATAAGGCCTTGGCTTTTCGGGTCGTGCAGGAAAAAACATTGGGGTATAC
CAGCCCACATTCTCATCAAGGAGAGGGAGGGGGGGAGGCAGGGAATTTTG
GAGGGGGTTGTAAGCACGCTCAGGCCAAAAAATTGGGGGACGTGACGAGT
TTGAATCTGACAGTGTTGAAGGCAGGGGTAAGCATGGATGGTGGGGAAAC
CTTTGCGTTTAATGTAATTCCGCAGGAGGCAGAGGCTGGGTTTGACATAC
GCGTGCCGCCCGGTGTGTCATTTGCAGAGATCAGGAAGTTGTTAGATGAG
TGGACGAGTGAAGACGGGGTCAGCTGGGAATTCGCCCAGGAGGGAGGGAA
AGATCCGTTGCTTGACCATCACATCACCTCGATTGATCGGGAACAGAATC
CATGGTTCTCAATTTTTTACGACGCCTTGGCCAGTCGGGGGGTCAAAATA
ACCCCTGAGGTATTTCCTGCCTCCACGGACGCGCGCTTTGTCAGGGCGAT
GGGGTTGGCGGCATTTGGGTTTAGCCCGATGCGGAAGACGGAGATGTTGT
TGCATGAGCATAATGAGTGGATTGGGGAGGACATGTTTGTCGAGGGGGTA
GGGGTATATGAGACGTTGATTCGGTCGTTGGGTAGCGCCGAGAAATTTCA
AGGGGAGGGAGTGGCCAAAAAGAAATGAATTTTTGAGCTTGTCCCCAACA
AGCCCGTGGTCCTGGCCAGCTGGATCGGCTCCGAGCCCGAGCTGCCCTCC
CTCTTGCTCAACTCCCACTATGACGTGGTACCCGCTCTCATCGACTACTG
GCACACCGACCCCTTCACGCCGGTGCGGAAGGATGGGAAGATTTATGCGC
GATGGCCACCTTCATATCGAGTCCAATGACGCCTCTGGAGAAGGAGGAAG
CCTTGACTCTTTTTGAAGAGTTGCTCAGGTTCCCGACCATCTCCTTTGCT
GGTCCCACCAACGGGAGCTACCGCGCCTGTGCCCAGTGGCTGGTGAAGAC
GCTAAGCGACTTGGGTTTAGAGACACAGCGGCACCCAAGACATGAAATGT
GTCTGCGCCCAATACATCCTCGCCATCAAGCGCCTAAAGTCCTTTCACGA
CCCCTCCCTCCCACCCTTCCTCCCCCGCCGCTCAATCCACCTCTCCTTCG
TTCCCGACGAGGAGATCGGCGGTGAAGACGGCATGGGCCCCTTCCTCCTG
ACCTCCCAATTCAAAAATTTGAATGTTGGATTGGCGCTAGACGAGGGGAT
CGCGAACCCGTTGGATGAATATACGTTTTTCTATGGAGAGAGGATGCCGT
TGTGGATAAGAGTAAAGGCACAAGGGAAAACGGGCCATGGCTCTCGGTTC
ATCCCTGGGACCGCAGTTAGTAAGATCATTGAAGTGGCGAATAAGGCCTT
GGCTTTTCGGGTCGTGCAGGAAAAAACATTGGGGTATACCAGCCCACATT
CTCATCAAGGAGAGGGAGGGGGGGAGGCAGGGAATTTTGGAGGGGGTTGT
AAGCACGCTCAGGCCAAAAAATTGGGGGACGTGACGAGTTTGAATCTGAC
AGTGTTGAAGGCAGGGGTAAGCATGGATGGTGGGGAAACCTTTGCGTTTA
ATGTAATTCCGCAGGAGGCAGAGGCTGGGTTTGACATACGCGTGCCGCCC
GGTGTGTCATTTGCAGAGATCAGGAAGTTGTTAGATGAGTGGACGAGTGA
AGACGGGGTCAGCTGGGAATTCGCCCAGGAGGGAGGGAAAGATCCGTTGC
TTGACCATCACATCACCTCGATTGATCGGGAACAGAATCCATGGTTCTCA
ATTTTTTACGACGCCTTGGCCAGTCGGGGGGTCAAAATAACCCCTGAGGT
ATTTCCTGCCTCCACGGACGCGCGCTTTGTCAGGGCGATGGGGTTGGCGG
CATTTGGGTTTAGCCCGATGCGGAAGACGGAGATGTTGTTGCATGAGCAT
AATGAGTGGATTGGGGAGGACATGTTTGTCGAGGGGGTAGGGGTATATGA
GACGTTGATTCGGTCGTTGGGTAGCGCCGAGAAATTTCAAGGGGAGGGAG
TGGCCAAAAAGAAATGAATTTTTGAGCTTGTCCCCAACAAGCCCGTGGTC
CTGGCCAGCTGGATCGGCTCCGAGCCCGAGCTGCCCTCCCTCTTGCTCAA
CTCCCACTATGACGTGGTACCCGCTCTCATCGACTACTGGCACACCGACC
CCTTCACGCCGGTGCGGAAGGATGGGAAGATTTATGCGCGATGGCCACCT
TCATATCGAGTCCAATGACGCCTCTGGAGAAGGAGGAAGCCTTGACTCTT
TTTGAAGAGTTGCTCAGGTTCCCGACCATCTCCTTTGCTGGTCCCACCAA
CGGGAGCTACCGCGCCTGTGCCCAGTGGCTGGTGAAGACGCTAAGCGACT
TGGGTTTAGAGACACAG back to top
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