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Properties
| Property Name | Value |
|---|
| TranscriptId | 574735 |
| Track | FilteredModels2 |
| ProteinId | 574649 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:750630..753082 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_919 ID=mRNA_919|Name=jgi.p|Nanoce1779_2|574649|organism=Nannochloropsis oceanica|type=mRNA|length=2230bp
ACAGGTGTGGGCTCAGTTTCGGATATAGGGGACGCGGCCTTACGTAAGGA
GATTTTCGCGTTTAGTCACCTTGGAAAGTCCTTGTCGCCGCAGCCACAAC
CCCTATAACCACTTACTTTCGGCTTTTCATAATGGAAGACGAACAGTTGG
ACATATCCGAGGATTGGCTGGCCGCAGGAGCATTAGGATCACAAATGGCC
CGCTTCGAGGCGCACTTACGCTGCCCGATTTGCGCCAGGTTTTTGGAGAC
GGCAATGGTTGCCGAATGCGGACATGCATTTTGCTCTTTATGTGTGAGAG
ACTGGCTAGGCCGCGGTGAGGATTTCCAAACCTGCCCGCACTGCAAGGGC
AACAGGAAGCCTAACACCGTTTTACACAAAGACCGGCTCAAACCCTGCAT
GAGCCTTGACAGCGCCGCCAGAGAATTCAAAGAGGCAAGGGCGACACTTT
TGCAAGCCGTTCTGTACCCGGGTTACAGCAATTCAGGAGGCCTCAGCTGC
GGAAAAGGAAGCAGAAAAAAAGCAATTGGCAGCAGCAGAAGTGGGGTTGG
TTATGGTGATAGGGGCAGTGGGAACAGTAGTCGGCGGGCGTTCGGGGCGC
AGCAACAGCAAGAGTTGGATGGGTACTGGGCGGGGAAGGCATGGAGCACG
ATATTGAAGCGCCACCCGGGCTATCACACTATTAAGGAGAAGGTGCTGCG
TCAGGAGTTGGGGGCAATGAACATGACGTCGAATGGGAAGAAGGAGGAGC
TTGTCTTTCGGCACCAGACATTTATTAAGTTGGCTGAGGCAGAGGCGGAT
AAGGTGAAGCTTGGACACCAAACGCGGTCTCGGCGGGAAGTGATCCAAGA
AGTGGAAGAAAAGGCTCAGGTTCGCTTTAATAATGGCAGTGGAGGAATGG
GAGGAGGGCGACAAGCTATACACTTGGACAGTGTGGCACAGCACAAAGGC
TTTGACGAGATGATTCGGGCAATAAAGCGCCAGCAGAAGGAGCAGAAACG
GAAAGACCATAGATTATCAGAAGGTGGGGGAAGGGAAGGGGATGGAGGAA
AAGGACGTGGGAGACAGAAGGGGGAAGACGTCGTAGCTCATACTGAAGGA
CAAGAGGTAGAGCGGAAGGATAACAACTCAGAACAGAAGATCTGGGAGAA
GGACGAAAGGGAAGTGAAGGAGGACGTCTCAGACGAGAGGGAACCAGGGA
CCGCAGCACCACAATCGATCGCAGAATTAGACTTAGGAGCAGGGGTGAAA
GGGAATGCAAAGAGAGATGTTAATTTAGACGCTACGAGAAATGGGATTGA
CGCGGGGAATATAGGGGACGGGGCCGGAAGGGGAGTTGCTTCCCTTTCTC
CTATAGAATTACAGGAGGATATTGGTGCTGTTGCGCACATATCCATGGGT
AGAGAGGAGGAAAGGGAGGAGGAGGACATCGTGATTATTGACTCGGTAAC
CAAAAGCAACAGTTACAACAGCAATAATTTGAAGCGGCGTGTAGGTGCCA
GTAGCCGAAACGGAAATGAAAGCGGTCATCACAAACGGCCCTACTCTCTG
CTTACATCTTTGACTGCAAAGAGCTCCTTACCACCGTCAACCATCATGAC
CACAAGTTGGAATTGTCAGTCTTGCACCTTGACTAATGCGGGGCCGGTCC
GAAACTGTGCTGCGTGCGGTGTTCCCCGCCAAGTATCTATAGCTCGCAAA
GACAGCCTCAAAGTTGTTCAGGACACTCAGCAAAAGCTTTTTGAAGAAGC
TCGCAAGCAACAGCAAAAACAGCCCCAGCTTGTGCCAAGTAGTATGCCGG
TGACTTTGGAACGGAAGGCTGGTGAGAGTATCAGCCCGAATCTCAACAGC
GCTAATATCAGCACCAGCGCCGATATTGTAGTCAGATTACTTAGGGTCGA
TGGAGCTCTCGGGCCTTCTTACCACATGCTGGGTAAATCCAGATATGAAA
AACAGGAGGGGCAAAACGTGGAACGCGAGGAGGGCTGTCATGGTAATAAG
AAGGACTCCATGGAAGCAGGGGAGAATTGGTCAGTGGACGAGCACGAGAC
GTGTCAGTTTTACAGTCCCTCGTATTGATCAGAAGAGAGAGACACCAACA
ACAAGCGATTGGTGGATGGGATGATGTTCAGACACAGCAAGCATAAAATT
GCTTTCGGTCAAGTCGACAATGTATATCTATGGGACTCTAACCAATGACA
TGAGAAAATTAAATAGATAGACAATCTGCG back to topprotein sequence of jgi.p|Nanoce1779_2|574649 >mRNA_919-protein ID=mRNA_919-protein|Name=jgi.p|Nanoce1779_2|574649|organism=Nannochloropsis oceanica|type=polypeptide|length=649bp
MEDEQLDISEDWLAAGALGSQMARFEAHLRCPICARFLETAMVAECGHAF
CSLCVRDWLGRGEDFQTCPHCKGNRKPNTVLHKDRLKPCMSLDSAAREFK
EARATLLQAVLYPGYSNSGGLSCGKGSRKKAIGSSRSGVGYGDRGSGNSS
RRAFGAQQQQELDGYWAGKAWSTILKRHPGYHTIKEKVLRQELGAMNMTS
NGKKEELVFRHQTFIKLAEAEADKVKLGHQTRSRREVIQEVEEKAQVRFN
NGSGGMGGGRQAIHLDSVAQHKGFDEMIRAIKRQQKEQKRKDHRLSEGGG
REGDGGKGRGRQKGEDVVAHTEGQEVERKDNNSEQKIWEKDEREVKEDVS
DEREPGTAAPQSIAELDLGAGVKGNAKRDVNLDATRNGIDAGNIGDGAGR
GVASLSPIELQEDIGAVAHISMGREEEREEEDIVIIDSVTKSNSYNSNNL
KRRVGASSRNGNESGHHKRPYSLLTSLTAKSSLPPSTIMTTSWNCQSCTL
TNAGPVRNCAACGVPRQVSIARKDSLKVVQDTQQKLFEEARKQQQKQPQL
VPSSMPVTLERKAGESISPNLNSANISTSADIVVRLLRVDGALGPSYHML
GKSRYEKQEGQNVEREEGCHGNKKDSMEAGENWSVDEHETCQFYSPSY* back to topmRNA from alignment at scaffold_2:750630..753082- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_919 ID=mRNA_919|Name=jgi.p|Nanoce1779_2|574649|organism=Nannochloropsis oceanica|type=mRNA|length=2453bp|location=Sequence derived from alignment at scaffold_2:750630..753082- (Nannochloropsis oceanica)
ACAGGTGTGGGCTCAGTTTCGGATATAGGGGACGCGGCCTTACGTAAGGA
GATTTTCGCGTTTAGTCACCTTGGAAAGTCCTTGTCGCCGCAGCCACAAC
CCCTATAACCACTTACTTTCGGCTTTTCATAATGGAAGACGAACAGTTGG
ACATATCCGAGGATTGGCTGGCCGCAGGAGCATTAGGATCACAAATGGCC
CGCTTCGAGGCGCACTTACGCTGCCCGATTTGCGCCAGGTTTTTGGAGAC
GGCAATGGTTGCCGAATGCGGGTGGGTTCAAGAGGGTGTGGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAATAGAGAGAGAGAGAATAGAGAGAGAGAAAGAGAGCGT
TTTTTTCCGGCCCCCGCGTGATTCCCCTCTTGATGTCTTATTTCTTATGT
TATTCATTCCCTTCCTCAACTTTTCCCTTCACCCTTTCCCAAAGACATGC
ATTTTGCTCTTTATGTGTGAGAGACTGGCTAGGCCGCGGTGAGGATTTCC
AAACCTGCCCGCACTGCAAGGGCAACAGGAAGCCTAACACCGTTTTACAC
AAAGACCGGCTCAAACCCTGCATGAGCCTTGACAGCGCCGCCAGAGAATT
CAAAGAGGCAAGGGCGACACTTTTGCAAGCCGTTCTGTACCCGGGTTACA
GCAATTCAGGAGGCCTCAGCTGCGGAAAAGGAAGCAGAAAAAAAGCAATT
GGCAGCAGCAGAAGTGGGGTTGGTTATGGTGATAGGGGCAGTGGGAACAG
TAGTCGGCGGGCGTTCGGGGCGCAGCAACAGCAAGAGTTGGATGGGTACT
GGGCGGGGAAGGCATGGAGCACGATATTGAAGCGCCACCCGGGCTATCAC
ACTATTAAGGAGAAGGTGCTGCGTCAGGAGTTGGGGGCAATGAACATGAC
GTCGAATGGGAAGAAGGAGGAGCTTGTCTTTCGGCACCAGACATTTATTA
AGTTGGCTGAGGCAGAGGCGGATAAGGTGAAGCTTGGACACCAAACGCGG
TCTCGGCGGGAAGTGATCCAAGAAGTGGAAGAAAAGGCTCAGGTTCGCTT
TAATAATGGCAGTGGAGGAATGGGAGGAGGGCGACAAGCTATACACTTGG
ACAGTGTGGCACAGCACAAAGGCTTTGACGAGATGATTCGGGCAATAAAG
CGCCAGCAGAAGGAGCAGAAACGGAAAGACCATAGATTATCAGAAGGTGG
GGGAAGGGAAGGGGATGGAGGAAAAGGACGTGGGAGACAGAAGGGGGAAG
ACGTCGTAGCTCATACTGAAGGACAAGAGGTAGAGCGGAAGGATAACAAC
TCAGAACAGAAGATCTGGGAGAAGGACGAAAGGGAAGTGAAGGAGGACGT
CTCAGACGAGAGGGAACCAGGGACCGCAGCACCACAATCGATCGCAGAAT
TAGACTTAGGAGCAGGGGTGAAAGGGAATGCAAAGAGAGATGTTAATTTA
GACGCTACGAGAAATGGGATTGACGCGGGGAATATAGGGGACGGGGCCGG
AAGGGGAGTTGCTTCCCTTTCTCCTATAGAATTACAGGAGGATATTGGTG
CTGTTGCGCACATATCCATGGGTAGAGAGGAGGAAAGGGAGGAGGAGGAC
ATCGTGATTATTGACTCGGTAACCAAAAGCAACAGTTACAACAGCAATAA
TTTGAAGCGGCGTGTAGGTGCCAGTAGCCGAAACGGAAATGAAAGCGGTC
ATCACAAACGGCCCTACTCTCTGCTTACATCTTTGACTGCAAAGAGCTCC
TTACCACCGTCAACCATCATGACCACAAGTTGGAATTGTCAGTCTTGCAC
CTTGACTAATGCGGGGCCGGTCCGAAACTGTGCTGCGTGCGGTGTTCCCC
GCCAAGTATCTATAGCTCGCAAAGACAGCCTCAAAGTTGTTCAGGACACT
CAGCAAAAGCTTTTTGAAGAAGCTCGCAAGCAACAGCAAAAACAGCCCCA
GCTTGTGCCAAGTAGTATGCCGGTGACTTTGGAACGGAAGGCTGGTGAGA
GTATCAGCCCGAATCTCAACAGCGCTAATATCAGCACCAGCGCCGATATT
GTAGTCAGATTACTTAGGGTCGATGGAGCTCTCGGGCCTTCTTACCACAT
GCTGGGTAAATCCAGATATGAAAAACAGGAGGGGCAAAACGTGGAACGCG
AGGAGGGCTGTCATGGTAATAAGAAGGACTCCATGGAAGCAGGGGAGAAT
TGGTCAGTGGACGAGCACGAGACGTGTCAGTTTTACAGTCCCTCGTATTG
ATCAGAAGAGAGAGACACCAACAACAAGCGATTGGTGGATGGGATGATGT
TCAGACACAGCAAGCATAAAATTGCTTTCGGTCAAGTCGACAATGTATAT
CTATGGGACTCTAACCAATGACATGAGAAAATTAAATAGATAGACAATCT
GCG back to topCoding sequence (CDS) from alignment at scaffold_2:750630..753082- >mRNA_919 ID=mRNA_919|Name=jgi.p|Nanoce1779_2|574649|organism=Nannochloropsis oceanica|type=CDS|length=3894bp|location=Sequence derived from alignment at scaffold_2:750630..753082- (Nannochloropsis oceanica)
ACATGCATTTTGCTCTTTATGTGTGAGAGACTGGCTAGGCCGCGGTGAGG
ATTTCCAAACCTGCCCGCACTGCAAGGGCAACAGGAAGCCTAACACCGTT
TTACACAAAGACCGGCTCAAACCCTGCATGAGCCTTGACAGCGCCGCCAG
AGAATTCAAAGAGGCAAGGGCGACACTTTTGCAAGCCGTTCTGTACCCGG
GTTACAGCAATTCAGGAGGCCTCAGCTGCGGAAAAGGAAGCAGAAAAAAA
GCAATTGGCAGCAGCAGAAGTGGGGTTGGTTATGGTGATAGGGGCAGTGG
GAACAGTAGTCGGCGGGCGTTCGGGGCGCAGCAACAGCAAGAGTTGGATG
GGTACTGGGCGGGGAAGGCATGGAGCACGATATTGAAGCGCCACCCGGGC
TATCACACTATTAAGGAGAAGGTGCTGCGTCAGGAGTTGGGGGCAATGAA
CATGACGTCGAATGGGAAGAAGGAGGAGCTTGTCTTTCGGCACCAGACAT
TTATTAAGTTGGCTGAGGCAGAGGCGGATAAGGTGAAGCTTGGACACCAA
ACGCGGTCTCGGCGGGAAGTGATCCAAGAAGTGGAAGAAAAGGCTCAGGT
TCGCTTTAATAATGGCAGTGGAGGAATGGGAGGAGGGCGACAAGCTATAC
ACTTGGACAGTGTGGCACAGCACAAAGGCTTTGACGAGATGATTCGGGCA
ATAAAGCGCCAGCAGAAGGAGCAGAAACGGAAAGACCATAGATTATCAGA
AGGTGGGGGAAGGGAAGGGGATGGAGGAAAAGGACGTGGGAGACAGAAGG
GGGAAGACGTCGTAGCTCATACTGAAGGACAAGAGGTAGAGCGGAAGGAT
AACAACTCAGAACAGAAGATCTGGGAGAAGGACGAAAGGGAAGTGAAGGA
GGACGTCTCAGACGAGAGGGAACCAGGGACCGCAGCACCACAATCGATCG
CAGAATTAGACTTAGGAGCAGGGGTGAAAGGGAATGCAAAGAGAGATGTT
AATTTAGACGCTACGAGAAATGGGATTGACGCGGGGAATATAGGGGACGG
GGCCGGAAGGGGAGTTGCTTCCCTTTCTCCTATAGAATTACAGGAGGATA
TTGGTGCTGTTGCGCACATATCCATGGGTAGAGAGGAGGAAAGGGAGGAG
GAGGACATCGTGATTATTGACTCGGTAACCAAAAGCAACAGTTACAACAG
CAATAATTTGAAGCGGCGTGTAGGTGCCAGTAGCCGAAACGGAAATGAAA
GCGGTCATCACAAACGGCCCTACTCTCTGCTTACATCTTTGACTGCAAAG
AGCTCCTTACCACCGTCAACCATCATGACCACAAGTTGGAATTGTCAGTC
TTGCACCTTGACTAATGCGGGGCCGGTCCGAAACTGTGCTGCGTGCGGTG
TTCCCCGCCAAGTATCTATAGCTCGCAAAGACAGCCTCAAAGTTGTTCAG
GACACTCAGCAAAAGCTTTTTGAAGAAGCTCGCAAGCAACAGCAAAAACA
GCCCCAGCTTGTGCCAAGTAGTATGCCGGTGACTTTGGAACGGAAGGCTG
GTGAGAGTATCAGCCCGAATCTCAACAGCGCTAATATCAGCACCAGCGCC
GATATTGTAGTCAGATTACTTAGGGTCGATGGAGCTCTCGGGCCTTCTTA
CCACATGCTGGGTAAATCCAGATATGAAAAACAGGAGGGGCAAAACGTGG
AACGCGAGGAGGGCTGTCATGGTAATAAGAAGGACTCCATGGAAGCAGGG
GAGAATTGGTCAGTGGACGAGCACGAGACGTGTCAGTTTTACAGTCCCTC
GTATTGAATGGAAGACGAACAGTTGGACATATCCGAGGATTGGCTGGCCG
CAGGAGCATTAGGATCACAAATGGCCCGCTTCGAGGCGCACTTACGCTGC
CCGATTTGCGCCAGGTTTTTGGAGACGGCAATGGTTGCCGAATGCGGACA
TGCATTTTGCTCTTTATGTGTGAGAGACTGGCTAGGCCGCGGTGAGGATT
TCCAAACCTGCCCGCACTGCAAGGGCAACAGGAAGCCTAACACCGTTTTA
CACAAAGACCGGCTCAAACCCTGCATGAGCCTTGACAGCGCCGCCAGAGA
ATTCAAAGAGGCAAGGGCGACACTTTTGCAAGCCGTTCTGTACCCGGGTT
ACAGCAATTCAGGAGGCCTCAGCTGCGGAAAAGGAAGCAGAAAAAAAGCA
ATTGGCAGCAGCAGAAGTGGGGTTGGTTATGGTGATAGGGGCAGTGGGAA
CAGTAGTCGGCGGGCGTTCGGGGCGCAGCAACAGCAAGAGTTGGATGGGT
ACTGGGCGGGGAAGGCATGGAGCACGATATTGAAGCGCCACCCGGGCTAT
CACACTATTAAGGAGAAGGTGCTGCGTCAGGAGTTGGGGGCAATGAACAT
GACGTCGAATGGGAAGAAGGAGGAGCTTGTCTTTCGGCACCAGACATTTA
TTAAGTTGGCTGAGGCAGAGGCGGATAAGGTGAAGCTTGGACACCAAACG
CGGTCTCGGCGGGAAGTGATCCAAGAAGTGGAAGAAAAGGCTCAGGTTCG
CTTTAATAATGGCAGTGGAGGAATGGGAGGAGGGCGACAAGCTATACACT
TGGACAGTGTGGCACAGCACAAAGGCTTTGACGAGATGATTCGGGCAATA
AAGCGCCAGCAGAAGGAGCAGAAACGGAAAGACCATAGATTATCAGAAGG
TGGGGGAAGGGAAGGGGATGGAGGAAAAGGACGTGGGAGACAGAAGGGGG
AAGACGTCGTAGCTCATACTGAAGGACAAGAGGTAGAGCGGAAGGATAAC
AACTCAGAACAGAAGATCTGGGAGAAGGACGAAAGGGAAGTGAAGGAGGA
CGTCTCAGACGAGAGGGAACCAGGGACCGCAGCACCACAATCGATCGCAG
AATTAGACTTAGGAGCAGGGGTGAAAGGGAATGCAAAGAGAGATGTTAAT
TTAGACGCTACGAGAAATGGGATTGACGCGGGGAATATAGGGGACGGGGC
CGGAAGGGGAGTTGCTTCCCTTTCTCCTATAGAATTACAGGAGGATATTG
GTGCTGTTGCGCACATATCCATGGGTAGAGAGGAGGAAAGGGAGGAGGAG
GACATCGTGATTATTGACTCGGTAACCAAAAGCAACAGTTACAACAGCAA
TAATTTGAAGCGGCGTGTAGGTGCCAGTAGCCGAAACGGAAATGAAAGCG
GTCATCACAAACGGCCCTACTCTCTGCTTACATCTTTGACTGCAAAGAGC
TCCTTACCACCGTCAACCATCATGACCACAAGTTGGAATTGTCAGTCTTG
CACCTTGACTAATGCGGGGCCGGTCCGAAACTGTGCTGCGTGCGGTGTTC
CCCGCCAAGTATCTATAGCTCGCAAAGACAGCCTCAAAGTTGTTCAGGAC
ACTCAGCAAAAGCTTTTTGAAGAAGCTCGCAAGCAACAGCAAAAACAGCC
CCAGCTTGTGCCAAGTAGTATGCCGGTGACTTTGGAACGGAAGGCTGGTG
AGAGTATCAGCCCGAATCTCAACAGCGCTAATATCAGCACCAGCGCCGAT
ATTGTAGTCAGATTACTTAGGGTCGATGGAGCTCTCGGGCCTTCTTACCA
CATGCTGGGTAAATCCAGATATGAAAAACAGGAGGGGCAAAACGTGGAAC
GCGAGGAGGGCTGTCATGGTAATAAGAAGGACTCCATGGAAGCAGGGGAG
AATTGGTCAGTGGACGAGCACGAGACGTGTCAGTTTTACAGTCCCTCGTA
TTGAATGGAAGACGAACAGTTGGACATATCCGAGGATTGGCTGGCCGCAG
GAGCATTAGGATCACAAATGGCCCGCTTCGAGGCGCACTTACGCTGCCCG
ATTTGCGCCAGGTTTTTGGAGACGGCAATGGTTGCCGAATGCGG back to top
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