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Properties
| Property Name | Value |
|---|
| TranscriptId | 606854 |
| Track | FilteredModels2 |
| ProteinId | 606768 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:144776..146336 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9178 ID=mRNA_9178|Name=jgi.p|Nanoce1779_2|606768|organism=Nannochloropsis oceanica|type=mRNA|length=1466bp
AGATAAAGGCTGCAAAACAGCAGAGTTTTCGCAAGGCGCCACGGCACGCC
AACTGGTCCTCATGAGTAGCCACAGGGCATCCGACGACGAGGACTTGTCC
TTGTACGACATTTTGGGATTGACCCGCACGTGCTCCGAAGATGACGTGAG
GAAAGCTTATCGACGCCTGGCCCTCCAGATGCACCCAGATCGAAATCTTG
GCAACGAAGAAGAGTCCCGACAAGTGTTTATGCTCGTTGGTGAGGCATAT
GAGGTGTTGAGTGATCCTGAACGACGTGCTGTCTACGACCGCTTCGGACG
GGAGGGGCTGGCGGCCCACGACCAAGGGCATCGGCACCCTGCTTCTGCAC
CTCCCTCTCCCGCGGCTCCTGCAGGTGATGCATTTCATGCAGGCGGCGAT
GGTAGCTTTTCTTATCATGACGATGCTGATTTCGGGTTTAGGCATGCGCA
AAGCATTTTTGACGCCTTCTTCGCGCAGGAGAGTGACTGGAATTTCGGAG
GATTCGGTGGTGCCAGAGGACGGGGAGGAGGAGGAGGAGGAGTAGCAGGG
GCGTTTTTTGGTCATGGTGTTTTCAATCATCCTTTTTTCCATGGTGGTGG
TAGTGGAATGTATCAGCAGCAGGGAGGATTTGATCCGTTTGGGCCTTTTG
CAGGCATGCCGGGAATGGGTGGAAGGGGGGGCGGGTACCAGCAGCAATTT
CAGAGCAGTAGCAGTGGTGGTGGTGTTTATCTCACTACAAACAGCAATGG
CGGGGGGACAAGCAGTAGTAGCAGTACTTATGCTGTTGGTGGTGGAGGGG
GAGGAGTGGTGTCTTCTTCGAGCAGCATGAGTAGTGGTGGGATGGGAGGG
GGGGTGCGGCGGTCGGTCAGGACGGCGACCACAGTGGGGGCAGGTGGTAG
GAGCCGAACGAGGACGGAAACGACGACGACGTACCCAGACGGACGGAGTG
AGACAACGGTGGAAGAGTGGGAGGAGGACGTGCCACGGGCAGAAGGAGAA
GGGCATTACATGCAGCAGGTGCAGCACCAGCGAGGCACGAGGACGCAAGG
GTGGACGCGGTAGAGGAACAAAGAGAGAGCCAGGATGGAGGCTTGTGCAG
ATATCAGAAAGGGAAGGGAGGATGTGTCTGGGGGCATGTCGGGGAACAAG
AGAAAGACTTTGGTTATCATGCATAAAAAATATGTAAGGCATCTACCTAT
CTGTCGATGTCTTCTTCTACGTGGTTGTTGGAGGGGAATTGGGCTTTGAA
AGAGAATTCACTGTGCATGCATCTCCAGTTTCAGAAAATGAACTGTTGGC
ATGTGCATCACTCCAGAGCGTGAGTCTGCCTAGTAGAATCTTATCTATAG
AGCGGAGAGGATGAAGAAGATGTAGTAAAGTAGGAGAAGAAAAAAAAAGA
GGAATATAGGAAGTCCATCCTCGTTTTGACAAGGCGAGATAAACGAATGT
CACTCTGAAGACACAG back to topprotein sequence of jgi.p|Nanoce1779_2|606768 >mRNA_9178-protein ID=mRNA_9178-protein|Name=jgi.p|Nanoce1779_2|606768|organism=Nannochloropsis oceanica|type=polypeptide|length=334bp
MSSHRASDDEDLSLYDILGLTRTCSEDDVRKAYRRLALQMHPDRNLGNEE
ESRQVFMLVGEAYEVLSDPERRAVYDRFGREGLAAHDQGHRHPASAPPSP
AAPAGDAFHAGGDGSFSYHDDADFGFRHAQSIFDAFFAQESDWNFGGFGG
ARGRGGGGGGVAGAFFGHGVFNHPFFHGGGSGMYQQQGGFDPFGPFAGMP
GMGGRGGGYQQQFQSSSSGGGVYLTTNSNGGGTSSSSSTYAVGGGGGGVV
SSSSSMSSGGMGGGVRRSVRTATTVGAGGRSRTRTETTTTYPDGRSETTV
EEWEEDVPRAEGEGHYMQQVQHQRGTRTQGWTR* back to topmRNA from alignment at scaffold_36:144776..146336- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9178 ID=mRNA_9178|Name=jgi.p|Nanoce1779_2|606768|organism=Nannochloropsis oceanica|type=mRNA|length=1561bp|location=Sequence derived from alignment at scaffold_36:144776..146336- (Nannochloropsis oceanica)
AGATAAAGGCTGCAAAACAGCAGAGTTTTCGCAAGGCGCCACGGGTAAGG
TCGCAAGCCATCCTCTCATCCCCCCGTCGTCGTTTTTTTCTCTATCATCC
CGCGTAACCGAACTCAGAGGTTCTACGCACCCTTTTCAGCACGCCAACTG
GTCCTCATGAGTAGCCACAGGGCATCCGACGACGAGGACTTGTCCTTGTA
CGACATTTTGGGATTGACCCGCACGTGCTCCGAAGATGACGTGAGGAAAG
CTTATCGACGCCTGGCCCTCCAGATGCACCCAGATCGAAATCTTGGCAAC
GAAGAAGAGTCCCGACAAGTGTTTATGCTCGTTGGTGAGGCATATGAGGT
GTTGAGTGATCCTGAACGACGTGCTGTCTACGACCGCTTCGGACGGGAGG
GGCTGGCGGCCCACGACCAAGGGCATCGGCACCCTGCTTCTGCACCTCCC
TCTCCCGCGGCTCCTGCAGGTGATGCATTTCATGCAGGCGGCGATGGTAG
CTTTTCTTATCATGACGATGCTGATTTCGGGTTTAGGCATGCGCAAAGCA
TTTTTGACGCCTTCTTCGCGCAGGAGAGTGACTGGAATTTCGGAGGATTC
GGTGGTGCCAGAGGACGGGGAGGAGGAGGAGGAGGAGTAGCAGGGGCGTT
TTTTGGTCATGGTGTTTTCAATCATCCTTTTTTCCATGGTGGTGGTAGTG
GAATGTATCAGCAGCAGGGAGGATTTGATCCGTTTGGGCCTTTTGCAGGC
ATGCCGGGAATGGGTGGAAGGGGGGGCGGGTACCAGCAGCAATTTCAGAG
CAGTAGCAGTGGTGGTGGTGTTTATCTCACTACAAACAGCAATGGCGGGG
GGACAAGCAGTAGTAGCAGTACTTATGCTGTTGGTGGTGGAGGGGGAGGA
GTGGTGTCTTCTTCGAGCAGCATGAGTAGTGGTGGGATGGGAGGGGGGGT
GCGGCGGTCGGTCAGGACGGCGACCACAGTGGGGGCAGGTGGTAGGAGCC
GAACGAGGACGGAAACGACGACGACGTACCCAGACGGACGGAGTGAGACA
ACGGTGGAAGAGTGGGAGGAGGACGTGCCACGGGCAGAAGGAGAAGGGCA
TTACATGCAGCAGGTGCAGCACCAGCGAGGCACGAGGACGCAAGGGTGGA
CGCGGTAGAGGAACAAAGAGAGAGCCAGGATGGAGGCTTGTGCAGATATC
AGAAAGGGAAGGGAGGATGTGTCTGGGGGCATGTCGGGGAACAAGAGAAA
GACTTTGGTTATCATGCATAAAAAATATGTAAGGCATCTACCTATCTGTC
GATGTCTTCTTCTACGTGGTTGTTGGAGGGGAATTGGGCTTTGAAAGAGA
ATTCACTGTGCATGCATCTCCAGTTTCAGAAAATGAACTGTTGGCATGTG
CATCACTCCAGAGCGTGAGTCTGCCTAGTAGAATCTTATCTATAGAGCGG
AGAGGATGAAGAAGATGTAGTAAAGTAGGAGAAGAAAAAAAAAGAGGAAT
ATAGGAAGTCCATCCTCGTTTTGACAAGGCGAGATAAACGAATGTCACTC
TGAAGACACAG back to topCoding sequence (CDS) from alignment at scaffold_36:144776..146336- >mRNA_9178 ID=mRNA_9178|Name=jgi.p|Nanoce1779_2|606768|organism=Nannochloropsis oceanica|type=CDS|length=1002bp|location=Sequence derived from alignment at scaffold_36:144776..146336- (Nannochloropsis oceanica)
ATGAGTAGCCACAGGGCATCCGACGACGAGGACTTGTCCTTGTACGACAT
TTTGGGATTGACCCGCACGTGCTCCGAAGATGACGTGAGGAAAGCTTATC
GACGCCTGGCCCTCCAGATGCACCCAGATCGAAATCTTGGCAACGAAGAA
GAGTCCCGACAAGTGTTTATGCTCGTTGGTGAGGCATATGAGGTGTTGAG
TGATCCTGAACGACGTGCTGTCTACGACCGCTTCGGACGGGAGGGGCTGG
CGGCCCACGACCAAGGGCATCGGCACCCTGCTTCTGCACCTCCCTCTCCC
GCGGCTCCTGCAGGTGATGCATTTCATGCAGGCGGCGATGGTAGCTTTTC
TTATCATGACGATGCTGATTTCGGGTTTAGGCATGCGCAAAGCATTTTTG
ACGCCTTCTTCGCGCAGGAGAGTGACTGGAATTTCGGAGGATTCGGTGGT
GCCAGAGGACGGGGAGGAGGAGGAGGAGGAGTAGCAGGGGCGTTTTTTGG
TCATGGTGTTTTCAATCATCCTTTTTTCCATGGTGGTGGTAGTGGAATGT
ATCAGCAGCAGGGAGGATTTGATCCGTTTGGGCCTTTTGCAGGCATGCCG
GGAATGGGTGGAAGGGGGGGCGGGTACCAGCAGCAATTTCAGAGCAGTAG
CAGTGGTGGTGGTGTTTATCTCACTACAAACAGCAATGGCGGGGGGACAA
GCAGTAGTAGCAGTACTTATGCTGTTGGTGGTGGAGGGGGAGGAGTGGTG
TCTTCTTCGAGCAGCATGAGTAGTGGTGGGATGGGAGGGGGGGTGCGGCG
GTCGGTCAGGACGGCGACCACAGTGGGGGCAGGTGGTAGGAGCCGAACGA
GGACGGAAACGACGACGACGTACCCAGACGGACGGAGTGAGACAACGGTG
GAAGAGTGGGAGGAGGACGTGCCACGGGCAGAAGGAGAAGGGCATTACAT
GCAGCAGGTGCAGCACCAGCGAGGCACGAGGACGCAAGGGTGGACGCGGT
AG back to top
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