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Properties
| Property Name | Value |
|---|
| TranscriptId | 606790 |
| Track | FilteredModels2 |
| ProteinId | 606704 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:92670..94046 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9158 ID=mRNA_9158|Name=jgi.p|Nanoce1779_2|606704|organism=Nannochloropsis oceanica|type=mRNA|length=1221bp
AGTTTCCCCCCCTAGTTGCACAACCTCAAAACGAAGTCCAACCTAAATTT
TCGTCCTTCATCGCCATGCGGAAACTCTACCTTGTTGTCCTGTCGTCCCT
CGCGACCATGAGCTGTGTCGCAGCCACTGCCTCTCTCCCCGCCACTCTTG
TCACAACCCGCCGCCCATCCTCCCCGTCCTGCTGCTTCCTCCGTCCCTCC
CTCCCTTCTGCCTCCTCAAGAAGAAGAACATCCCGCTCCTCTTTCTCATT
CACCACAACCACCATGCGCCTGAACGCCAACCAAAACGATGAGAGTCCTT
CCCTATTCGAACGTGCCTTCAGCGCCATGCCCTACATGCTGCCCGTCCTC
GACTCGGTTAACTACTCCAAATTCCTCGCGTTTTACGCTCCCCAGTTTTT
CAATCCCGTCTATGCGGCGCTGGATCCCTTGCTAGCCGTTTACAAGTCCT
CCCCGTTCATCAATCTGGCGATTTACCTGCTGATTGTGTGGGTAGGACGA
CAGCCAGCCCTCAGTCGGTTCGTGCGATTTAATTTCCAACAAGCCATCAT
CTTGGACATTGCTCTGGTCATTCCTTCCATTCTCACCTCCATTCTGAGGG
AGCAAGCCGCACCTGTGTGGGTGCAAGAACCCGTGGCCAACACCTTATTC
TTCATTCTGTCCGCCTCCCTGCTCTACGTGTCTGCCAAGCTGGCCTTGGG
GGAGAAACCTAACGAAATTCCATTGGTCAGTGAAGCGGCAGAACTTACTT
CAGGGCCTTTCTAAAGAAGAGGCGGTAGAGAGTGAGGGAGGAAGGGAAGG
ATAGAAAATCTGGTGGTATGTTGAATTTTTGGTGGAGCCAGTGGGGGAGA
AGCCGATCGAAAATCGTTGGTTAGCCAAGCAGCAGCATCAGCAGCAGCAG
CAATGACAGCGAACCTGTTATTATGACTAGATAGTGAGGTACTGCTCGCT
CCCTTCCCTCCCGCCCTCCCTCCACCTCTGCGCTTGATACACTCTTGGCT
TAGAGTCGTGGACGGCCGGGAGAAGAGGGAGCGAGGAAGGGAAGGCATAA
GGGAGGGGAAGGATGTAAATGCAAGAAAATGATACTAGCTTGCACTGATG
GAGGACGGAGGGCAAGAAGAGGAGCAAGAAGAGGAGAAGGAAGGGCAGAG
AACGAAAAGAAGGAAGACTACGTGTTGAAAGCCAAGCCTTTAATCCGTGT
CCCTCCACCTAAGTTTGAAGC back to topprotein sequence of jgi.p|Nanoce1779_2|606704 >mRNA_9158-protein ID=mRNA_9158-protein|Name=jgi.p|Nanoce1779_2|606704|organism=Nannochloropsis oceanica|type=polypeptide|length=233bp
MRKLYLVVLSSLATMSCVAATASLPATLVTTRRPSSPSCCFLRPSLPSAS
SRRRTSRSSFSFTTTTMRLNANQNDESPSLFERAFSAMPYMLPVLDSVNY
SKFLAFYAPQFFNPVYAALDPLLAVYKSSPFINLAIYLLIVWVGRQPALS
RFVRFNFQQAIILDIALVIPSILTSILREQAAPVWVQEPVANTLFFILSA
SLLYVSAKLALGEKPNEIPLVSEAAELTSGPF* back to topmRNA from alignment at scaffold_36:92670..94046- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9158 ID=mRNA_9158|Name=jgi.p|Nanoce1779_2|606704|organism=Nannochloropsis oceanica|type=mRNA|length=1377bp|location=Sequence derived from alignment at scaffold_36:92670..94046- (Nannochloropsis oceanica)
AGTTTCCCCCCCTAGTTGCACAACCTCAAAACGAAGTCCAACCTAAATTT
TCGTCCTTCATCGCCATGCGGAAACTCTACCTTGTTGTCCTGTCGTCCCT
CGCGACCATGAGCTGTGTCGCAGCCACTGCCTCTCTCCCCGCCACTCTTG
TCACAACCCGCCGCCCATCCTCCCCGTCCTGCTGCTTCCTCCGTCCCTCC
CTCCCTTCTGCCTCCTCAAGAAGAAGAACATCCCGCTCCTCTTTCTCATT
CACCACAACCACCATGCGCCTGAACGCCAACCAAAACGATGAGAGTCCTT
CCCTATTCGAACGTGCCTTCAGCGCCATGCCCTACATGCTGCCCGTCCTC
GACTCGGTTAACTACTCCAAATTCCTCGCGTTTTACGCTCCCCAGTTTTT
CAATCCCGTCTATGCGGCGCTGGATCCCTTGCTAGCCGTTTACAAGTCCT
CCCCGTTCATCAATCTGGCGATTTACCTGCTGATTGTGTGGGTAGGACGA
CAGCCAGCCCTCAGTCGGTTCGTGCGATTTAATTTCCAACAAGGTGAGGA
GGGAGAGATGGGCGAAAGTTGGGTAGGAGGAAATGACAGAAGGAAAAGAA
ATTCGAGCTTGAGTTGTGCAGTTGAAAACTGAGTATTTGACCTTTCTCCC
TCCTTCTCTCCCTCCGCCCCTCCATCCCTCACTCCCTCCCTCTCTTAAGC
CATCATCTTGGACATTGCTCTGGTCATTCCTTCCATTCTCACCTCCATTC
TGAGGGAGCAAGCCGCACCTGTGTGGGTGCAAGAACCCGTGGCCAACACC
TTATTCTTCATTCTGTCCGCCTCCCTGCTCTACGTGTCTGCCAAGCTGGC
CTTGGGGGAGAAACCTAACGAAATTCCATTGGTCAGTGAAGCGGCAGAAC
TTACTTCAGGGCCTTTCTAAAGAAGAGGCGGTAGAGAGTGAGGGAGGAAG
GGAAGGATAGAAAATCTGGTGGTATGTTGAATTTTTGGTGGAGCCAGTGG
GGGAGAAGCCGATCGAAAATCGTTGGTTAGCCAAGCAGCAGCATCAGCAG
CAGCAGCAATGACAGCGAACCTGTTATTATGACTAGATAGTGAGGTACTG
CTCGCTCCCTTCCCTCCCGCCCTCCCTCCACCTCTGCGCTTGATACACTC
TTGGCTTAGAGTCGTGGACGGCCGGGAGAAGAGGGAGCGAGGAAGGGAAG
GCATAAGGGAGGGGAAGGATGTAAATGCAAGAAAATGATACTAGCTTGCA
CTGATGGAGGACGGAGGGCAAGAAGAGGAGCAAGAAGAGGAGAAGGAAGG
GCAGAGAACGAAAAGAAGGAAGACTACGTGTTGAAAGCCAAGCCTTTAAT
CCGTGTCCCTCCACCTAAGTTTGAAGC back to topCoding sequence (CDS) from alignment at scaffold_36:92670..94046- >mRNA_9158 ID=mRNA_9158|Name=jgi.p|Nanoce1779_2|606704|organism=Nannochloropsis oceanica|type=CDS|length=1398bp|location=Sequence derived from alignment at scaffold_36:92670..94046- (Nannochloropsis oceanica)
CCATCATCTTGGACATTGCTCTGGTCATTCCTTCCATTCTCACCTCCATT
CTGAGGGAGCAAGCCGCACCTGTGTGGGTGCAAGAACCCGTGGCCAACAC
CTTATTCTTCATTCTGTCCGCCTCCCTGCTCTACGTGTCTGCCAAGCTGG
CCTTGGGGGAGAAACCTAACGAAATTCCATTGGTCAGTGAAGCGGCAGAA
CTTACTTCAGGGCCTTTCTAAATGCGGAAACTCTACCTTGTTGTCCTGTC
GTCCCTCGCGACCATGAGCTGTGTCGCAGCCACTGCCTCTCTCCCCGCCA
CTCTTGTCACAACCCGCCGCCCATCCTCCCCGTCCTGCTGCTTCCTCCGT
CCCTCCCTCCCTTCTGCCTCCTCAAGAAGAAGAACATCCCGCTCCTCTTT
CTCATTCACCACAACCACCATGCGCCTGAACGCCAACCAAAACGATGAGA
GTCCTTCCCTATTCGAACGTGCCTTCAGCGCCATGCCCTACATGCTGCCC
GTCCTCGACTCGGTTAACTACTCCAAATTCCTCGCGTTTTACGCTCCCCA
GTTTTTCAATCCCGTCTATGCGGCGCTGGATCCCTTGCTAGCCGTTTACA
AGTCCTCCCCGTTCATCAATCTGGCGATTTACCTGCTGATTGTGTGGGTA
GGACGACAGCCAGCCCTCAGTCGGTTCGTGCGATTTAATTTCCAACAAGC
CATCATCTTGGACATTGCTCTGGTCATTCCTTCCATTCTCACCTCCATTC
TGAGGGAGCAAGCCGCACCTGTGTGGGTGCAAGAACCCGTGGCCAACACC
TTATTCTTCATTCTGTCCGCCTCCCTGCTCTACGTGTCTGCCAAGCTGGC
CTTGGGGGAGAAACCTAACGAAATTCCATTGGTCAGTGAAGCGGCAGAAC
TTACTTCAGGGCCTTTCTAAATGCGGAAACTCTACCTTGTTGTCCTGTCG
TCCCTCGCGACCATGAGCTGTGTCGCAGCCACTGCCTCTCTCCCCGCCAC
TCTTGTCACAACCCGCCGCCCATCCTCCCCGTCCTGCTGCTTCCTCCGTC
CCTCCCTCCCTTCTGCCTCCTCAAGAAGAAGAACATCCCGCTCCTCTTTC
TCATTCACCACAACCACCATGCGCCTGAACGCCAACCAAAACGATGAGAG
TCCTTCCCTATTCGAACGTGCCTTCAGCGCCATGCCCTACATGCTGCCCG
TCCTCGACTCGGTTAACTACTCCAAATTCCTCGCGTTTTACGCTCCCCAG
TTTTTCAATCCCGTCTATGCGGCGCTGGATCCCTTGCTAGCCGTTTACAA
GTCCTCCCCGTTCATCAATCTGGCGATTTACCTGCTGATTGTGTGGGTAG
GACGACAGCCAGCCCTCAGTCGGTTCGTGCGATTTAATTTCCAACAAG back to top
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