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Properties
Property Name | Value |
TranscriptId | 633582 |
Track | FilteredModels2 |
ProteinId | 633496 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_36 | supercontig | scaffold_36:89546..91776 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9157 ID=mRNA_9157|Name=jgi.p|Nanoce1779_2|633496|organism=Nannochloropsis oceanica|type=mRNA|length=1621bp AACAGCAGCAACGTCACGCGGGACACGAAAACAGCACACACTAACCCAGC CTGCCCCTGGACATACCCCGTAAAAGTATTTCTGCACCGCCCACACCACC ACCAGCAGCAACAGAGACTGCATAAGACTGGCACTCAGGATGCGACGTCC ATTACTCGCCAGCCAGCCCTTGGCATTTTTTCCCGTCTCCCTCGCCCTCC TCCTACTCGCCCTCCCCAATCACGGTACACGCGCCTTCCAATTATGTCCG ACGTCCTGTACAAGTAACAGGCTCATCTCCTCCCCTCCCTCCTCATCCAG TTGTAGTAGCAGTAGCAGCAGCAGCAGCAGCAGTCGGAGAATAACACAAC CACAACAAAAGCCAAGACAAGAACAAGGTCGTTTCTCCAAACTCTTTCAA ATGAGCACTCTCACCAGCAATAGCAACAGCAGAAGAAGAAGCAGCAGCAG CAGCAGCAGCAGCAGGGGCTACGCCGAACGCGGCGGTACGAATGGGAGCC GTCGTCGCACCCCCAGCAACACACTTAATAGCAATTTGAAAGCTTTTCCT TCAGAGAATCCACCGGGAGCCGACGGAACTGTCAGAACAAGCACATCGAT CCACTTGCCTGCAGAGCAACAATTGGAACTGGCCCGATGCGTCAAGTCGT GGGTAGCGTGCAAGGAGACGAAAAAAGAACGAGAAGAAATGATCGGGAGA CCGTTGTCTTTTGAAGAGTGGGCCGTGGCCGTTGGAATGGAGGAAAAGAC GCTGCGAAGACAGATCGAAGACGGGAAGGCGGCGAGGGAGCTGCTGATCA AGACGAACATTAACTTGATCAAGTCCATGGCAGTGCGATTGTACGCCCGC CAGGAGAAGAACGAGAACAGGCTCAGCGTGGATGATCTGGTGCTCGAGGG GACTCAAGGCATTTTGAAAGCAGCGGCCAAATTCGATCCTACCCGGAACA TCCGCTTCACGACCTACGCCGTGTGGTGGATCCGTCAGGCCATCTCCCTG GCCATCCAGACGCACAGCAACACCGTCCGCCTCCCCGTTCTCCTCCAAGC ACGCATAAAGAAAATAAAGGAAGCTCGTCTGCGCCTTTACCTCTTGCTGG AGCGGGAGCCCACGCATGAAGAGGTGGGGAAGGAAATCGGTCTGCCGGCA GGGAAGGTAGAATCGATCAGGAGGAAGGGGGGGAGGGGCCGTCTGGTGGG CGCAGAAGAGGAATGGGTGGTCGTGGGCATGGCGATGGGCAACGGCATGG ACGGGGAAGAAGGAAGGGAGGAAGGTGTCCAACAGCAGGCGGGAGAGGGG GGGATGGGGATGGTCGAAGGGGGAGAGGGGCCGTTGGTGGTGGATGGAAA GGGTGGAGAGACTGAGGGAGGGAGGGAGGAACGACGGAAACTTGAGGCGT TTAAGAAATCGGTGGTGTTGCGTTTGAAAGAGGGAGACAGAGAGGTGATT GAGACGAGGTGGAAGACGTACAAGGAGGGAAAGGGAGGGAAGGACGGTCA GCCAGCAGTATCAGGGCGGAGGTTGAAACGGATTCAGGGGGAGTTGAGGG CAATGGTGTGGGAGAAAGACCTCGAGGATAGGAGGGATGTATTTTCATCC ATGCGATTGTGTATGGCATGA back to topprotein sequence of jgi.p|Nanoce1779_2|633496 >mRNA_9157-protein ID=mRNA_9157-protein|Name=jgi.p|Nanoce1779_2|633496|organism=Nannochloropsis oceanica|type=polypeptide|length=494bp MRRPLLASQPLAFFPVSLALLLLALPNHGTRAFQLCPTSCTSNRLISSPP SSSSCSSSSSSSSSSRRITQPQQKPRQEQGRFSKLFQMSTLTSNSNSRRR SSSSSSSSRGYAERGGTNGSRRRTPSNTLNSNLKAFPSENPPGADGTVRT STSIHLPAEQQLELARCVKSWVACKETKKEREEMIGRPLSFEEWAVAVGM EEKTLRRQIEDGKAARELLIKTNINLIKSMAVRLYARQEKNENRLSVDDL VLEGTQGILKAAAKFDPTRNIRFTTYAVWWIRQAISLAIQTHSNTVRLPV LLQARIKKIKEARLRLYLLLEREPTHEEVGKEIGLPAGKVESIRRKGGRG RLVGAEEEWVVVGMAMGNGMDGEEGREEGVQQQAGEGGMGMVEGGEGPLV VDGKGGETEGGREERRKLEAFKKSVVLRLKEGDREVIETRWKTYKEGKGG KDGQPAVSGRRLKRIQGELRAMVWEKDLEDRRDVFSSMRLCMA* back to topmRNA from alignment at scaffold_36:89546..91776- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9157 ID=mRNA_9157|Name=jgi.p|Nanoce1779_2|633496|organism=Nannochloropsis oceanica|type=mRNA|length=2231bp|location=Sequence derived from alignment at scaffold_36:89546..91776- (Nannochloropsis oceanica) AACAGCAGCAACGTCACGCGGGACACGAAAACAGCACACACTAACCCAGC
CTGCCCCTGGACATACCCCGTAAAAGTATTTCTGCACCGCCCACACCACC
ACCAGCAGCAACAGAGACTGCATAAGACTGGCACTCAGGATGCGACGTCC
ATTACTCGCCAGCCAGCCCTTGGCATTTTTTCCCGTCTCCCTCGCCCTCC
TCCTACTCGCCCTCCCCAATCACGGTTCGTGCATGCGTGGCGAATCCCGT
CGTTTAGATGACCTATCCATTGGGCATATCACCCATGCCTGTGCGTCTGT
TTTCGCAACGCATGGACGCAAGGGGCATGGCATTCAGGGAGTGGTGACGT
AGTTCATTACCTGTCCCCTCTCTCTATGATTATCATTTATGCCCACCGTC
CTTCTATTCGTGATCCCATCCTGTATATTTCACCATTCCTCAAAGCTTAC
CCTTCCTTCACTCCCTCTCTTTTTTTCTTTCTCCCTCCCTCCCTCCCTCT
TCTCCTCATCACAGGTACACGCGCCTTCCAATTATGTCCGACGTCCTGTA
CAAGTAACAGGCTCATCTCCTCCCCTCCCTCCTCATCCAGTTGTAGTAGC
AGTAGCAGCAGCAGCAGCAGCAGTCGGAGAATAACACAACCACAACAAAA
GCCAAGACAAGAACAAGGTCGTTTCTCCAAACTCTTTCAAATGAGCACTC
TCACCAGCAATAGCAACAGCAGAAGAAGAAGCAGCAGCAGCAGCAGCAGC
AGCAGGGGCTACGCCGAACGCGGCGGTACGAATGGGAGCCGTCGTCGCAC
CCCCAGCAACACACTTAATAGCAATTTGAAAGCTTTTCCTTCAGAGAATC
CACCGGGAGCCGACGGAACTGTCAGAACAAGCACATCGATCCACTTGCCT
GCAGAGGTACGTTCCATCTCGCCTTTCACACACCCCTCCCTCCCTTCCTT
CCTCGCTCCTTCCTTCCAGGGCATCCTTTTAAATTGACCTTCCTTCCCTA
CCGTCTCTTTTTTATTTGATAACAGCAACAATTGGAACTGGCCCGATGCG
TCAAGTCGTGGGTAGCGTGCAAGGAGACGAAAAAAGAACGAGAAGAAATG
ATCGGGAGACCGTTGTCTTTTGAAGAGTGGGCCGTGGCCGTTGGAATGGA
GGAAAAGACGCTGCGAAGACAGATCGAAGACGGGAAGGCGGCGAGGGAGC
TGCTGATCAAGACGAACATTAACTTGATCAAGTCCATGGCAGTGCGATTG
TACGCCCGCCAGGAGAAGAACGAGAACAGGCTCAGCGTGGATGATCTGGT
GCTCGAGGGGACTCAAGGTAAGGAACGAGGAAGAGAGGGAGGGGAGGATG
GGGGGGAGATGAGAGGGATCGAAGAGGTATGAAGAATGGGTTGTGAATCT
CTACTGTACCCGTCTCCAGCGCGTTCAGACGACGTAATAAAGGTCATGTC
CCTTGCACCCGTCTCAGCACCCCCTCCCTCCCCCCCTCCCTCTCCCTCTC
CCTCCTTCCCTTCCTCAGGCATTTTGAAAGCAGCGGCCAAATTCGATCCT
ACCCGGAACATCCGCTTCACGACCTACGCCGTGTGGTGGATCCGTCAGGC
CATCTCCCTGGCCATCCAGACGCACAGCAACACCGTCCGCCTCCCCGTTC
TCCTCCAAGCACGCATAAAGAAAATAAAGGAAGCTCGTCTGCGCCTTTAC
CTCTTGCTGGAGCGGGAGCCCACGCATGAAGAGGTGGGGAAGGAAATCGG
TCTGCCGGCAGGGAAGGTAGAATCGATCAGGAGGAAGGGGGGGAGGGGCC
GTCTGGTGGGCGCAGAAGAGGAATGGGTGGTCGTGGGCATGGCGATGGGC
AACGGCATGGACGGGGAAGAAGGAAGGGAGGAAGGTGTCCAACAGCAGGC
GGGAGAGGGGGGGATGGGGATGGTCGAAGGGGGAGAGGGGCCGTTGGTGG
TGGATGGAAAGGGTGGAGAGACTGAGGGAGGGAGGGAGGAACGACGGAAA
CTTGAGGCGTTTAAGAAATCGGTGGTGTTGCGTTTGAAAGAGGGAGACAG
AGAGGTGATTGAGACGAGGTGGAAGACGTACAAGGAGGGAAAGGGAGGGA
AGGACGGTCAGCCAGCAGTATCAGGGCGGAGGTTGAAACGGATTCAGGGG
GAGTTGAGGGCAATGGTGTGGGAGAAAGACCTCGAGGATAGGAGGGATGT
ATTTTCATCCATGCGATTGTGTATGGCATGA back to topCoding sequence (CDS) from alignment at scaffold_36:89546..91776- >mRNA_9157 ID=mRNA_9157|Name=jgi.p|Nanoce1779_2|633496|organism=Nannochloropsis oceanica|type=CDS|length=5928bp|location=Sequence derived from alignment at scaffold_36:89546..91776- (Nannochloropsis oceanica) GCATTTTGAAAGCAGCGGCCAAATTCGATCCTACCCGGAACATCCGCTTC ACGACCTACGCCGTGTGGTGGATCCGTCAGGCCATCTCCCTGGCCATCCA GACGCACAGCAACACCGTCCGCCTCCCCGTTCTCCTCCAAGCACGCATAA AGAAAATAAAGGAAGCTCGTCTGCGCCTTTACCTCTTGCTGGAGCGGGAG CCCACGCATGAAGAGGTGGGGAAGGAAATCGGTCTGCCGGCAGGGAAGGT AGAATCGATCAGGAGGAAGGGGGGGAGGGGCCGTCTGGTGGGCGCAGAAG AGGAATGGGTGGTCGTGGGCATGGCGATGGGCAACGGCATGGACGGGGAA GAAGGAAGGGAGGAAGGTGTCCAACAGCAGGCGGGAGAGGGGGGGATGGG GATGGTCGAAGGGGGAGAGGGGCCGTTGGTGGTGGATGGAAAGGGTGGAG AGACTGAGGGAGGGAGGGAGGAACGACGGAAACTTGAGGCGTTTAAGAAA TCGGTGGTGTTGCGTTTGAAAGAGGGAGACAGAGAGGTGATTGAGACGAG GTGGAAGACGTACAAGGAGGGAAAGGGAGGGAAGGACGGTCAGCCAGCAG TATCAGGGCGGAGGTTGAAACGGATTCAGGGGGAGTTGAGGGCAATGGTG TGGGAGAAAGACCTCGAGGATAGGAGGGATGTATTTTCATCCATGCGATT GTGTATGGCATGACAACAATTGGAACTGGCCCGATGCGTCAAGTCGTGGG TAGCGTGCAAGGAGACGAAAAAAGAACGAGAAGAAATGATCGGGAGACCG TTGTCTTTTGAAGAGTGGGCCGTGGCCGTTGGAATGGAGGAAAAGACGCT GCGAAGACAGATCGAAGACGGGAAGGCGGCGAGGGAGCTGCTGATCAAGA CGAACATTAACTTGATCAAGTCCATGGCAGTGCGATTGTACGCCCGCCAG GAGAAGAACGAGAACAGGCTCAGCGTGGATGATCTGGTGCTCGAGGGGAC TCAAGGTACACGCGCCTTCCAATTATGTCCGACGTCCTGTACAAGTAACA GGCTCATCTCCTCCCCTCCCTCCTCATCCAGTTGTAGTAGCAGTAGCAGC AGCAGCAGCAGCAGTCGGAGAATAACACAACCACAACAAAAGCCAAGACA AGAACAAGGTCGTTTCTCCAAACTCTTTCAAATGAGCACTCTCACCAGCA ATAGCAACAGCAGAAGAAGAAGCAGCAGCAGCAGCAGCAGCAGCAGGGGC TACGCCGAACGCGGCGGTACGAATGGGAGCCGTCGTCGCACCCCCAGCAA CACACTTAATAGCAATTTGAAAGCTTTTCCTTCAGAGAATCCACCGGGAG CCGACGGAACTGTCAGAACAAGCACATCGATCCACTTGCCTGCAGAGATG CGACGTCCATTACTCGCCAGCCAGCCCTTGGCATTTTTTCCCGTCTCCCT CGCCCTCCTCCTACTCGCCCTCCCCAATCACGGCATTTTGAAAGCAGCGG CCAAATTCGATCCTACCCGGAACATCCGCTTCACGACCTACGCCGTGTGG TGGATCCGTCAGGCCATCTCCCTGGCCATCCAGACGCACAGCAACACCGT CCGCCTCCCCGTTCTCCTCCAAGCACGCATAAAGAAAATAAAGGAAGCTC GTCTGCGCCTTTACCTCTTGCTGGAGCGGGAGCCCACGCATGAAGAGGTG GGGAAGGAAATCGGTCTGCCGGCAGGGAAGGTAGAATCGATCAGGAGGAA GGGGGGGAGGGGCCGTCTGGTGGGCGCAGAAGAGGAATGGGTGGTCGTGG GCATGGCGATGGGCAACGGCATGGACGGGGAAGAAGGAAGGGAGGAAGGT GTCCAACAGCAGGCGGGAGAGGGGGGGATGGGGATGGTCGAAGGGGGAGA GGGGCCGTTGGTGGTGGATGGAAAGGGTGGAGAGACTGAGGGAGGGAGGG AGGAACGACGGAAACTTGAGGCGTTTAAGAAATCGGTGGTGTTGCGTTTG AAAGAGGGAGACAGAGAGGTGATTGAGACGAGGTGGAAGACGTACAAGGA GGGAAAGGGAGGGAAGGACGGTCAGCCAGCAGTATCAGGGCGGAGGTTGA AACGGATTCAGGGGGAGTTGAGGGCAATGGTGTGGGAGAAAGACCTCGAG GATAGGAGGGATGTATTTTCATCCATGCGATTGTGTATGGCATGACAACA ATTGGAACTGGCCCGATGCGTCAAGTCGTGGGTAGCGTGCAAGGAGACGA AAAAAGAACGAGAAGAAATGATCGGGAGACCGTTGTCTTTTGAAGAGTGG GCCGTGGCCGTTGGAATGGAGGAAAAGACGCTGCGAAGACAGATCGAAGA CGGGAAGGCGGCGAGGGAGCTGCTGATCAAGACGAACATTAACTTGATCA AGTCCATGGCAGTGCGATTGTACGCCCGCCAGGAGAAGAACGAGAACAGG CTCAGCGTGGATGATCTGGTGCTCGAGGGGACTCAAGGTACACGCGCCTT CCAATTATGTCCGACGTCCTGTACAAGTAACAGGCTCATCTCCTCCCCTC CCTCCTCATCCAGTTGTAGTAGCAGTAGCAGCAGCAGCAGCAGCAGTCGG AGAATAACACAACCACAACAAAAGCCAAGACAAGAACAAGGTCGTTTCTC CAAACTCTTTCAAATGAGCACTCTCACCAGCAATAGCAACAGCAGAAGAA GAAGCAGCAGCAGCAGCAGCAGCAGCAGGGGCTACGCCGAACGCGGCGGT ACGAATGGGAGCCGTCGTCGCACCCCCAGCAACACACTTAATAGCAATTT GAAAGCTTTTCCTTCAGAGAATCCACCGGGAGCCGACGGAACTGTCAGAA CAAGCACATCGATCCACTTGCCTGCAGAGATGCGACGTCCATTACTCGCC AGCCAGCCCTTGGCATTTTTTCCCGTCTCCCTCGCCCTCCTCCTACTCGC CCTCCCCAATCACGGCATTTTGAAAGCAGCGGCCAAATTCGATCCTACCC GGAACATCCGCTTCACGACCTACGCCGTGTGGTGGATCCGTCAGGCCATC TCCCTGGCCATCCAGACGCACAGCAACACCGTCCGCCTCCCCGTTCTCCT CCAAGCACGCATAAAGAAAATAAAGGAAGCTCGTCTGCGCCTTTACCTCT TGCTGGAGCGGGAGCCCACGCATGAAGAGGTGGGGAAGGAAATCGGTCTG CCGGCAGGGAAGGTAGAATCGATCAGGAGGAAGGGGGGGAGGGGCCGTCT GGTGGGCGCAGAAGAGGAATGGGTGGTCGTGGGCATGGCGATGGGCAACG GCATGGACGGGGAAGAAGGAAGGGAGGAAGGTGTCCAACAGCAGGCGGGA GAGGGGGGGATGGGGATGGTCGAAGGGGGAGAGGGGCCGTTGGTGGTGGA TGGAAAGGGTGGAGAGACTGAGGGAGGGAGGGAGGAACGACGGAAACTTG AGGCGTTTAAGAAATCGGTGGTGTTGCGTTTGAAAGAGGGAGACAGAGAG GTGATTGAGACGAGGTGGAAGACGTACAAGGAGGGAAAGGGAGGGAAGGA CGGTCAGCCAGCAGTATCAGGGCGGAGGTTGAAACGGATTCAGGGGGAGT TGAGGGCAATGGTGTGGGAGAAAGACCTCGAGGATAGGAGGGATGTATTT TCATCCATGCGATTGTGTATGGCATGACAACAATTGGAACTGGCCCGATG CGTCAAGTCGTGGGTAGCGTGCAAGGAGACGAAAAAAGAACGAGAAGAAA TGATCGGGAGACCGTTGTCTTTTGAAGAGTGGGCCGTGGCCGTTGGAATG GAGGAAAAGACGCTGCGAAGACAGATCGAAGACGGGAAGGCGGCGAGGGA GCTGCTGATCAAGACGAACATTAACTTGATCAAGTCCATGGCAGTGCGAT TGTACGCCCGCCAGGAGAAGAACGAGAACAGGCTCAGCGTGGATGATCTG GTGCTCGAGGGGACTCAAGGTACACGCGCCTTCCAATTATGTCCGACGTC CTGTACAAGTAACAGGCTCATCTCCTCCCCTCCCTCCTCATCCAGTTGTA GTAGCAGTAGCAGCAGCAGCAGCAGCAGTCGGAGAATAACACAACCACAA CAAAAGCCAAGACAAGAACAAGGTCGTTTCTCCAAACTCTTTCAAATGAG CACTCTCACCAGCAATAGCAACAGCAGAAGAAGAAGCAGCAGCAGCAGCA GCAGCAGCAGGGGCTACGCCGAACGCGGCGGTACGAATGGGAGCCGTCGT CGCACCCCCAGCAACACACTTAATAGCAATTTGAAAGCTTTTCCTTCAGA GAATCCACCGGGAGCCGACGGAACTGTCAGAACAAGCACATCGATCCACT TGCCTGCAGAGATGCGACGTCCATTACTCGCCAGCCAGCCCTTGGCATTT TTTCCCGTCTCCCTCGCCCTCCTCCTACTCGCCCTCCCCAATCACGGCAT TTTGAAAGCAGCGGCCAAATTCGATCCTACCCGGAACATCCGCTTCACGA CCTACGCCGTGTGGTGGATCCGTCAGGCCATCTCCCTGGCCATCCAGACG CACAGCAACACCGTCCGCCTCCCCGTTCTCCTCCAAGCACGCATAAAGAA AATAAAGGAAGCTCGTCTGCGCCTTTACCTCTTGCTGGAGCGGGAGCCCA CGCATGAAGAGGTGGGGAAGGAAATCGGTCTGCCGGCAGGGAAGGTAGAA TCGATCAGGAGGAAGGGGGGGAGGGGCCGTCTGGTGGGCGCAGAAGAGGA ATGGGTGGTCGTGGGCATGGCGATGGGCAACGGCATGGACGGGGAAGAAG GAAGGGAGGAAGGTGTCCAACAGCAGGCGGGAGAGGGGGGGATGGGGATG GTCGAAGGGGGAGAGGGGCCGTTGGTGGTGGATGGAAAGGGTGGAGAGAC TGAGGGAGGGAGGGAGGAACGACGGAAACTTGAGGCGTTTAAGAAATCGG TGGTGTTGCGTTTGAAAGAGGGAGACAGAGAGGTGATTGAGACGAGGTGG AAGACGTACAAGGAGGGAAAGGGAGGGAAGGACGGTCAGCCAGCAGTATC AGGGCGGAGGTTGAAACGGATTCAGGGGGAGTTGAGGGCAATGGTGTGGG AGAAAGACCTCGAGGATAGGAGGGATGTATTTTCATCCATGCGATTGTGT ATGGCATGACAACAATTGGAACTGGCCCGATGCGTCAAGTCGTGGGTAGC GTGCAAGGAGACGAAAAAAGAACGAGAAGAAATGATCGGGAGACCGTTGT CTTTTGAAGAGTGGGCCGTGGCCGTTGGAATGGAGGAAAAGACGCTGCGA AGACAGATCGAAGACGGGAAGGCGGCGAGGGAGCTGCTGATCAAGACGAA CATTAACTTGATCAAGTCCATGGCAGTGCGATTGTACGCCCGCCAGGAGA AGAACGAGAACAGGCTCAGCGTGGATGATCTGGTGCTCGAGGGGACTCAA GGTACACGCGCCTTCCAATTATGTCCGACGTCCTGTACAAGTAACAGGCT CATCTCCTCCCCTCCCTCCTCATCCAGTTGTAGTAGCAGTAGCAGCAGCA GCAGCAGCAGTCGGAGAATAACACAACCACAACAAAAGCCAAGACAAGAA CAAGGTCGTTTCTCCAAACTCTTTCAAATGAGCACTCTCACCAGCAATAG CAACAGCAGAAGAAGAAGCAGCAGCAGCAGCAGCAGCAGCAGGGGCTACG CCGAACGCGGCGGTACGAATGGGAGCCGTCGTCGCACCCCCAGCAACACA CTTAATAGCAATTTGAAAGCTTTTCCTTCAGAGAATCCACCGGGAGCCGA CGGAACTGTCAGAACAAGCACATCGATCCACTTGCCTGCAGAGATGCGAC GTCCATTACTCGCCAGCCAGCCCTTGGCATTTTTTCCCGTCTCCCTCGCC CTCCTCCTACTCGCCCTCCCCAATCACG back to top
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