jgi.p|Nanoce1779_2|606685, mRNA_9154 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|606685
Unique NamemRNA_9154
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length667
Alignment locationscaffold_36:77011..77677 -

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Properties
Property NameValue
TranscriptId606771
TrackFilteredModels2
ProteinId606685
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:77011..77677 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606685gene_9154Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606685mRNA_9154-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_9154CDS_9154Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_9154 ID=mRNA_9154|Name=jgi.p|Nanoce1779_2|606685|organism=Nannochloropsis oceanica|type=mRNA|length=667bp
GATGAAGATGCAATTACTCCTAGCGGGTTTCGTGGATGTGGAAGCCTTGC
CGGCCTCTGCGAGCAGTAGTGCCAGTTTGATTGCGCACAAACCCAAGTGG
GAAGTAGGCGCTACGGCGTCTGTCTCCCTTCCTACCTATTCCTCCCTCCC
TGCCCCGACCTCCTCCTCCACCTCGGCCAGGCCAATCGCGTCAACGTGGA
GGGTGACGGATGTGGAGGGGGAGGAAGACGAAGACGGGGGGGAGGGAGAG
TTGATTGACCCCGATTCTTTGTTAGAAAATGATGATGGGCTCTTGGCGGC
TGCAGTGGCGAAGAAGGCAGCGAAGGCTAAGGAGAATGGGGGGGCGGGCT
GCGAGACAAAGAAGAGGGCGTGCAAGAACTGCTCGTGCGGCAGGGCCGAG
ATGGAGGAAAATGGGAAAGAGGGCGGGGTGGTGTTGCCGGTAATGACGGA
AGAGGAATTGAAGGAAAGTGTGTCGTCGTGTGGGAACTGTTATAAGGGGG
ATGCGTTTCGGTGCGGCGGGTGCCCGTATCTCGGCAAACCAGCATTTGAG
CCTGGGCAAGAAAAATTGATTATTAAGCTGGATTAATGAGGAAGATGGGA
GGGGGGATGGGAAGGGATGGATAAGCCGGGGTCTGTCTTTTTAATTCTCA
ATCTGCACCTAGGGAGG
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protein sequence of jgi.p|Nanoce1779_2|606685

>mRNA_9154-protein ID=mRNA_9154-protein|Name=jgi.p|Nanoce1779_2|606685|organism=Nannochloropsis oceanica|type=polypeptide|length=195bp
MKMQLLLAGFVDVEALPASASSSASLIAHKPKWEVGATASVSLPTYSSLP
APTSSSTSARPIASTWRVTDVEGEEDEDGGEGELIDPDSLLENDDGLLAA
AVAKKAAKAKENGGAGCETKKRACKNCSCGRAEMEENGKEGGVVLPVMTE
EELKESVSSCGNCYKGDAFRCGGCPYLGKPAFEPGQEKLIIKLD*
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mRNA from alignment at scaffold_36:77011..77677-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9154 ID=mRNA_9154|Name=jgi.p|Nanoce1779_2|606685|organism=Nannochloropsis oceanica|type=mRNA|length=667bp|location=Sequence derived from alignment at scaffold_36:77011..77677- (Nannochloropsis oceanica)
GATGAAGATGCAATTACTCCTAGCGGGTTTCGTGGATGTGGAAGCCTTGC
CGGCCTCTGCGAGCAGTAGTGCCAGTTTGATTGCGCACAAACCCAAGTGG
GAAGTAGGCGCTACGGCGTCTGTCTCCCTTCCTACCTATTCCTCCCTCCC
TGCCCCGACCTCCTCCTCCACCTCGGCCAGGCCAATCGCGTCAACGTGGA
GGGTGACGGATGTGGAGGGGGAGGAAGACGAAGACGGGGGGGAGGGAGAG
TTGATTGACCCCGATTCTTTGTTAGAAAATGATGATGGGCTCTTGGCGGC
TGCAGTGGCGAAGAAGGCAGCGAAGGCTAAGGAGAATGGGGGGGCGGGCT
GCGAGACAAAGAAGAGGGCGTGCAAGAACTGCTCGTGCGGCAGGGCCGAG
ATGGAGGAAAATGGGAAAGAGGGCGGGGTGGTGTTGCCGGTAATGACGGA
AGAGGAATTGAAGGAAAGTGTGTCGTCGTGTGGGAACTGTTATAAGGGGG
ATGCGTTTCGGTGCGGCGGGTGCCCGTATCTCGGCAAACCAGCATTTGAG
CCTGGGCAAGAAAAATTGATTATTAAGCTGGATTAATGAGGAAGATGGGA
GGGGGGATGGGAAGGGATGGATAAGCCGGGGTCTGTCTTTTTAATTCTCA
ATCTGCACCTAGGGAGG
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Coding sequence (CDS) from alignment at scaffold_36:77011..77677-

>mRNA_9154 ID=mRNA_9154|Name=jgi.p|Nanoce1779_2|606685|organism=Nannochloropsis oceanica|type=CDS|length=585bp|location=Sequence derived from alignment at scaffold_36:77011..77677- (Nannochloropsis oceanica)
ATGAAGATGCAATTACTCCTAGCGGGTTTCGTGGATGTGGAAGCCTTGCC
GGCCTCTGCGAGCAGTAGTGCCAGTTTGATTGCGCACAAACCCAAGTGGG
AAGTAGGCGCTACGGCGTCTGTCTCCCTTCCTACCTATTCCTCCCTCCCT
GCCCCGACCTCCTCCTCCACCTCGGCCAGGCCAATCGCGTCAACGTGGAG
GGTGACGGATGTGGAGGGGGAGGAAGACGAAGACGGGGGGGAGGGAGAGT
TGATTGACCCCGATTCTTTGTTAGAAAATGATGATGGGCTCTTGGCGGCT
GCAGTGGCGAAGAAGGCAGCGAAGGCTAAGGAGAATGGGGGGGCGGGCTG
CGAGACAAAGAAGAGGGCGTGCAAGAACTGCTCGTGCGGCAGGGCCGAGA
TGGAGGAAAATGGGAAAGAGGGCGGGGTGGTGTTGCCGGTAATGACGGAA
GAGGAATTGAAGGAAAGTGTGTCGTCGTGTGGGAACTGTTATAAGGGGGA
TGCGTTTCGGTGCGGCGGGTGCCCGTATCTCGGCAAACCAGCATTTGAGC
CTGGGCAAGAAAAATTGATTATTAAGCTGGATTAA
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Synonyms
Publications