|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 633579 |
| Track | FilteredModels2 |
| ProteinId | 633493 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:74396..76050 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9153 ID=mRNA_9153|Name=jgi.p|Nanoce1779_2|633493|organism=Nannochloropsis oceanica|type=mRNA|length=1337bp
ACAGCACCATGGCCGACGACGTCCGAGCCCGCAAACTCCAACCCATCTAC
AATGCCTTAGACGCTCGAAACTACAAAATGGCTATTAAATTATGCACCAA
AAAGGACTTGGAGAGATGGGACATTGTCAAGACCCTGAAAGCGCACGCGT
TGGAAAGGCTTGGGAAGGTGGAGGAGGCTTTAGAAGTGTGTGCGGAAGTG
GCAGCACATAAGCCCACAGATGAGACGGTACTCAATACTCTGGTGCTCAC
GTACAAATTGACGGGGCACACACGAGAAGCGATTGCCTGCTACGAAGCCG
CCCTCGCGCAAGAAACGCAGGGAGGGAGGGAAGGCGGGTTGATGAACATG
GAGAATGGCCGGGAGTTAGTCTACTGTTATGTCCGCGGGAAAGAGTGGGG
GAAAGCTCAACTCTTGGCGATTCGGTTGTACAAGCAGGCTAGGCCGATGC
TGGCGTTGGCGGTACGGATGGTGCAGAAGGGCTTAGAGGAGAGAGAGAGG
CTGGGAGGAAGGGCAAGTGGGGAGGAGGTGGGGCTATATGTGATGTTATT
GGAAGAGCAAGGAGAAGATGAAAGGGCCTTGGAAGCCCTGAGGAAGTGGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGGAGCAAGGGAAGGCAGCG
AGGGAGGAAGGGGGGGGCACGATGTTGTTCATGTCGGAGAGAGAGCAGGC
AGGGATGGAGGGAGGGCTGTTGAGCAGGTTGAGGAGGTGGGAGGAAGCAG
CAGCATTACATAAGACGCAGGTTGAGAAACACCCTGACCAGTGGCAGGAA
TGGGTGGGGCTGCAAGAGGCATGGAGGGAGAGAGGGAAGGAAGGAGGGAA
AGATGGAGGAATGGAAGAAGAGCTGGTGTTCATGAAGAGGCTGCAGGCGG
TGCATCCTCTGTGTAGAGGCCCTCACTTGGCGGAGCTGGAGTGGAGGAAG
AGGAGGGTGGAGGGGGAGGGAGGGGGGGAGGGAGGGGGGGAGGGAGAGGA
GGAGGAGATAGGCAGACTGGTGGTGGAGTACGTGAAAAGATTTGGGACGA
AATTGTGTTGTTATGATGACCTGTTGCCTTATGCCTCGCTGTTAGTGAAG
AGGAGGAAGGGAGGGACGGAGGGAGGGGAGGCGTGGCGGTGGGTGGTGGA
GAGGTTGGAAGAGATGGCGATGGAGAACAGTGTGCTGGAGGAGGAGGGAG
GGAAGGAAGGAGGGAGGGAGGAGCTGGTGAAGAGATTGCAGAAGTTTATC
AGAACGCAGCAATTGTTGCGTTTATTGGGGGGGGGGGGGGGAAGGAAGGG
GGGCAAGGGGGGAAGGAGGAGTGGGTGCGGCGGTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|633493 >mRNA_9153-protein ID=mRNA_9153-protein|Name=jgi.p|Nanoce1779_2|633493|organism=Nannochloropsis oceanica|type=polypeptide|length=443bp
MADDVRARKLQPIYNALDARNYKMAIKLCTKKDLERWDIVKTLKAHALER
LGKVEEALEVCAEVAAHKPTDETVLNTLVLTYKLTGHTREAIACYEAALA
QETQGGREGGLMNMENGRELVYCYVRGKEWGKAQLLAIRLYKQARPMLAL
AVRMVQKGLEERERLGGRASGEEVGLYVMLLEEQGEDERALEALRKWGGR
EGGREGGGEQGKAAREEGGGTMLFMSEREQAGMEGGLLSRLRRWEEAAAL
HKTQVEKHPDQWQEWVGLQEAWRERGKEGGKDGGMEEELVFMKRLQAVHP
LCRGPHLAELEWRKRRVEGEGGGEGGGEGEEEEIGRLVVEYVKRFGTKLC
CYDDLLPYASLLVKRRKGGTEGGEAWRWVVERLEEMAMENSVLEEEGGKE
GGREELVKRLQKFIRTQQLLRLLGGGGGRKGGKGGRRSGCGG* back to topmRNA from alignment at scaffold_36:74396..76050- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9153 ID=mRNA_9153|Name=jgi.p|Nanoce1779_2|633493|organism=Nannochloropsis oceanica|type=mRNA|length=1655bp|location=Sequence derived from alignment at scaffold_36:74396..76050- (Nannochloropsis oceanica)
ACAGCACCATGGCCGACGACGTCCGAGCCCGCAAACTCCAACCCATCTAC
AATGCCTTAGACGCTCGAAACTACAAAATGGCTATTAAATTATGCACCAA
AAAGGACTTGGAGAGATGGGACATTGTCAAGACCCTGAAAGCGCACGCGT
TGGAAAGGCTTGGGAAGGTGGAGGAGGCTTTAGAAGTGTGTGCGGAAGTG
GCAGCACATAAGCCCACAGATGAGACGGTAAGAAAATGAGTATGTCGTAG
GGATACTAGGAGAGAGGTAAAATTCAGGAGGAAAACTGCTGCCTACGCAA
AAATTTAAGTCCACCCGCGAGAGGCCATCTCACGCTACCAAATCCCCCTA
AACTCCCCCCTTCTCTCCTTCTCTCTTCCCTCCCTCCCTCCCTCCCTCCC
TCCAGGTACTCAATACTCTGGTGCTCACGTACAAATTGACGGGGCACACA
CGAGAAGCGATTGCCTGCTACGAAGCCGCCCTCGCGCAAGAAACGCAGGG
AGGGAGGGAAGGCGGGTTGATGAACATGGAGAATGGCCGGGAGTTAGTCT
ACTGTTATGTCCGCGGGAAAGAGTGGGGGAAAGCTCAACTCTTGGCGATT
CGGTTGTACAAGCAGTGCTCTTCTCTCCCTCCCTCCTTCCCTCCCTCCCT
TCGTTCGGCCACCCAATATTTGTTTTGGGCCGGAACGATGATGTTTTTGA
AGGAGGGAGGGAGGGAGGGAGGGAGGGGGGGGGGGGGGAGGAGGAAGGGG
TCAGGGCTAGGCCGATGCTGGCGTTGGCGGTACGGATGGTGCAGAAGGGC
TTAGAGGAGAGAGAGAGGCTGGGAGGAAGGGCAAGTGGGGAGGAGGTGGG
GCTATATGTGATGTTATTGGAAGAGCAAGGAGAAGATGAAAGGGCCTTGG
AAGCCCTGAGGAAGTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGG
GAGCAAGGGAAGGCAGCGAGGGAGGAAGGGGGGGGCACGATGTTGTTCAT
GTCGGAGAGAGAGCAGGCAGGGATGGAGGGAGGGCTGTTGAGCAGGTTGA
GGAGGTGGGAGGAAGCAGCAGCATTACATAAGACGCAGGTTGAGAAACAC
CCTGACCAGTGGCAGGAATGGGTGGGGCTGCAAGAGGCATGGAGGGAGAG
AGGGAAGGAAGGAGGGAAAGATGGAGGAATGGAAGAAGAGCTGGTGTTCA
TGAAGAGGCTGCAGGCGGTGCATCCTCTGTGTAGAGGCCCTCACTTGGCG
GAGCTGGAGTGGAGGAAGAGGAGGGTGGAGGGGGAGGGAGGGGGGGAGGG
AGGGGGGGAGGGAGAGGAGGAGGAGATAGGCAGACTGGTGGTGGAGTACG
TGAAAAGATTTGGGACGAAATTGTGTTGTTATGATGACCTGTTGCCTTAT
GCCTCGCTGTTAGTGAAGAGGAGGAAGGGAGGGACGGAGGGAGGGGAGGC
GTGGCGGTGGGTGGTGGAGAGGTTGGAAGAGATGGCGATGGAGAACAGTG
TGCTGGAGGAGGAGGGAGGGAAGGAAGGAGGGAGGGAGGAGCTGGTGAAG
AGATTGCAGAAGTTTATCAGAACGCAGCAATTGTTGCGTTTATTGGGGGG
GGGGGGGGGAAGGAAGGGGGGCAAGGGGGGAAGGAGGAGTGGGTGCGGCG
GTTGA back to topCoding sequence (CDS) from alignment at scaffold_36:74396..76050- >mRNA_9153 ID=mRNA_9153|Name=jgi.p|Nanoce1779_2|633493|organism=Nannochloropsis oceanica|type=CDS|length=3987bp|location=Sequence derived from alignment at scaffold_36:74396..76050- (Nannochloropsis oceanica)
GGCTAGGCCGATGCTGGCGTTGGCGGTACGGATGGTGCAGAAGGGCTTAG
AGGAGAGAGAGAGGCTGGGAGGAAGGGCAAGTGGGGAGGAGGTGGGGCTA
TATGTGATGTTATTGGAAGAGCAAGGAGAAGATGAAAGGGCCTTGGAAGC
CCTGAGGAAGTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGGAGC
AAGGGAAGGCAGCGAGGGAGGAAGGGGGGGGCACGATGTTGTTCATGTCG
GAGAGAGAGCAGGCAGGGATGGAGGGAGGGCTGTTGAGCAGGTTGAGGAG
GTGGGAGGAAGCAGCAGCATTACATAAGACGCAGGTTGAGAAACACCCTG
ACCAGTGGCAGGAATGGGTGGGGCTGCAAGAGGCATGGAGGGAGAGAGGG
AAGGAAGGAGGGAAAGATGGAGGAATGGAAGAAGAGCTGGTGTTCATGAA
GAGGCTGCAGGCGGTGCATCCTCTGTGTAGAGGCCCTCACTTGGCGGAGC
TGGAGTGGAGGAAGAGGAGGGTGGAGGGGGAGGGAGGGGGGGAGGGAGGG
GGGGAGGGAGAGGAGGAGGAGATAGGCAGACTGGTGGTGGAGTACGTGAA
AAGATTTGGGACGAAATTGTGTTGTTATGATGACCTGTTGCCTTATGCCT
CGCTGTTAGTGAAGAGGAGGAAGGGAGGGACGGAGGGAGGGGAGGCGTGG
CGGTGGGTGGTGGAGAGGTTGGAAGAGATGGCGATGGAGAACAGTGTGCT
GGAGGAGGAGGGAGGGAAGGAAGGAGGGAGGGAGGAGCTGGTGAAGAGAT
TGCAGAAGTTTATCAGAACGCAGCAATTGTTGCGTTTATTGGGGGGGGGG
GGGGGAAGGAAGGGGGGCAAGGGGGGAAGGAGGAGTGGGTGCGGCGGTTG
AGTACTCAATACTCTGGTGCTCACGTACAAATTGACGGGGCACACACGAG
AAGCGATTGCCTGCTACGAAGCCGCCCTCGCGCAAGAAACGCAGGGAGGG
AGGGAAGGCGGGTTGATGAACATGGAGAATGGCCGGGAGTTAGTCTACTG
TTATGTCCGCGGGAAAGAGTGGGGGAAAGCTCAACTCTTGGCGATTCGGT
TGTACAAGCAATGGCCGACGACGTCCGAGCCCGCAAACTCCAACCCATCT
ACAATGCCTTAGACGCTCGAAACTACAAAATGGCTATTAAATTATGCACC
AAAAAGGACTTGGAGAGATGGGACATTGTCAAGACCCTGAAAGCGCACGC
GTTGGAAAGGCTTGGGAAGGTGGAGGAGGCTTTAGAAGTGTGTGCGGAAG
TGGCAGCACATAAGCCCACAGATGAGACGGGCTAGGCCGATGCTGGCGTT
GGCGGTACGGATGGTGCAGAAGGGCTTAGAGGAGAGAGAGAGGCTGGGAG
GAAGGGCAAGTGGGGAGGAGGTGGGGCTATATGTGATGTTATTGGAAGAG
CAAGGAGAAGATGAAAGGGCCTTGGAAGCCCTGAGGAAGTGGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGGGGGAGCAAGGGAAGGCAGCGAGGGAGG
AAGGGGGGGGCACGATGTTGTTCATGTCGGAGAGAGAGCAGGCAGGGATG
GAGGGAGGGCTGTTGAGCAGGTTGAGGAGGTGGGAGGAAGCAGCAGCATT
ACATAAGACGCAGGTTGAGAAACACCCTGACCAGTGGCAGGAATGGGTGG
GGCTGCAAGAGGCATGGAGGGAGAGAGGGAAGGAAGGAGGGAAAGATGGA
GGAATGGAAGAAGAGCTGGTGTTCATGAAGAGGCTGCAGGCGGTGCATCC
TCTGTGTAGAGGCCCTCACTTGGCGGAGCTGGAGTGGAGGAAGAGGAGGG
TGGAGGGGGAGGGAGGGGGGGAGGGAGGGGGGGAGGGAGAGGAGGAGGAG
ATAGGCAGACTGGTGGTGGAGTACGTGAAAAGATTTGGGACGAAATTGTG
TTGTTATGATGACCTGTTGCCTTATGCCTCGCTGTTAGTGAAGAGGAGGA
AGGGAGGGACGGAGGGAGGGGAGGCGTGGCGGTGGGTGGTGGAGAGGTTG
GAAGAGATGGCGATGGAGAACAGTGTGCTGGAGGAGGAGGGAGGGAAGGA
AGGAGGGAGGGAGGAGCTGGTGAAGAGATTGCAGAAGTTTATCAGAACGC
AGCAATTGTTGCGTTTATTGGGGGGGGGGGGGGGAAGGAAGGGGGGCAAG
GGGGGAAGGAGGAGTGGGTGCGGCGGTTGAGTACTCAATACTCTGGTGCT
CACGTACAAATTGACGGGGCACACACGAGAAGCGATTGCCTGCTACGAAG
CCGCCCTCGCGCAAGAAACGCAGGGAGGGAGGGAAGGCGGGTTGATGAAC
ATGGAGAATGGCCGGGAGTTAGTCTACTGTTATGTCCGCGGGAAAGAGTG
GGGGAAAGCTCAACTCTTGGCGATTCGGTTGTACAAGCAATGGCCGACGA
CGTCCGAGCCCGCAAACTCCAACCCATCTACAATGCCTTAGACGCTCGAA
ACTACAAAATGGCTATTAAATTATGCACCAAAAAGGACTTGGAGAGATGG
GACATTGTCAAGACCCTGAAAGCGCACGCGTTGGAAAGGCTTGGGAAGGT
GGAGGAGGCTTTAGAAGTGTGTGCGGAAGTGGCAGCACATAAGCCCACAG
ATGAGACGGGCTAGGCCGATGCTGGCGTTGGCGGTACGGATGGTGCAGAA
GGGCTTAGAGGAGAGAGAGAGGCTGGGAGGAAGGGCAAGTGGGGAGGAGG
TGGGGCTATATGTGATGTTATTGGAAGAGCAAGGAGAAGATGAAAGGGCC
TTGGAAGCCCTGAGGAAGTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GGGGGAGCAAGGGAAGGCAGCGAGGGAGGAAGGGGGGGGCACGATGTTGT
TCATGTCGGAGAGAGAGCAGGCAGGGATGGAGGGAGGGCTGTTGAGCAGG
TTGAGGAGGTGGGAGGAAGCAGCAGCATTACATAAGACGCAGGTTGAGAA
ACACCCTGACCAGTGGCAGGAATGGGTGGGGCTGCAAGAGGCATGGAGGG
AGAGAGGGAAGGAAGGAGGGAAAGATGGAGGAATGGAAGAAGAGCTGGTG
TTCATGAAGAGGCTGCAGGCGGTGCATCCTCTGTGTAGAGGCCCTCACTT
GGCGGAGCTGGAGTGGAGGAAGAGGAGGGTGGAGGGGGAGGGAGGGGGGG
AGGGAGGGGGGGAGGGAGAGGAGGAGGAGATAGGCAGACTGGTGGTGGAG
TACGTGAAAAGATTTGGGACGAAATTGTGTTGTTATGATGACCTGTTGCC
TTATGCCTCGCTGTTAGTGAAGAGGAGGAAGGGAGGGACGGAGGGAGGGG
AGGCGTGGCGGTGGGTGGTGGAGAGGTTGGAAGAGATGGCGATGGAGAAC
AGTGTGCTGGAGGAGGAGGGAGGGAAGGAAGGAGGGAGGGAGGAGCTGGT
GAAGAGATTGCAGAAGTTTATCAGAACGCAGCAATTGTTGCGTTTATTGG
GGGGGGGGGGGGGAAGGAAGGGGGGCAAGGGGGGAAGGAGGAGTGGGTGC
GGCGGTTGAGTACTCAATACTCTGGTGCTCACGTACAAATTGACGGGGCA
CACACGAGAAGCGATTGCCTGCTACGAAGCCGCCCTCGCGCAAGAAACGC
AGGGAGGGAGGGAAGGCGGGTTGATGAACATGGAGAATGGCCGGGAGTTA
GTCTACTGTTATGTCCGCGGGAAAGAGTGGGGGAAAGCTCAACTCTTGGC
GATTCGGTTGTACAAGCAATGGCCGACGACGTCCGAGCCCGCAAACTCCA
ACCCATCTACAATGCCTTAGACGCTCGAAACTACAAAATGGCTATTAAAT
TATGCACCAAAAAGGACTTGGAGAGATGGGACATTGTCAAGACCCTGAAA
GCGCACGCGTTGGAAAGGCTTGGGAAGGTGGAGGAGGCTTTAGAAGTGTG
TGCGGAAGTGGCAGCACATAAGCCCACAGATGAGACG back to top
|