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Properties
| Property Name | Value |
|---|
| TranscriptId | 606732 |
| Track | FilteredModels2 |
| ProteinId | 606646 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:45204..46720 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9141 ID=mRNA_9141|Name=jgi.p|Nanoce1779_2|606646|organism=Nannochloropsis oceanica|type=mRNA|length=1517bp
TATCAATGTTTTGTTTTTGGTTCTTTTCTTTCGTATCTTGATCTCTTTTT
GGAGCCGTGCTTGACGAAGTGCATCTGCACGGTGGGCCAGTAGATGCAGG
GAAAGGATGCAAAGGCGGCATTCATCAATTAGAGACCGAACGAAAGAGAG
AGAGCGCATGTCAAGAAGTATTTGTTTTAATTTCACAATATGAGTTGTAT
CGCGCATATGTCTCGAGTTCGTGTGAAATGCTAGAGGAACAGATGACAAC
GGTTCCGTGGGAAATTGCCTTCCTGGAAGAGATTGGAAAAAAGGTCACGC
GAAAGCACAGGGAGGCAAATTCCAAGGATATGAAGTAGTGGTATCACACA
TCTTGCTCTTGCTTGGTGGTTACCCATTGGCTGACATAAAGCGAAAAAAC
AGAAACCAGGGAGAAAGAGGAAATAAGAATGGAAGGGCGAAGGTGACACA
GCAGGAGAAGCTGATAAGGTGATTGGTTCAGCTACAATCGCTATATCATC
ACAATTCAAGAAAGAATGATTTAATTTGGCGGCAAGCATGGTCAATGCAC
GGTGCGAGAACAATAATGTTACCGATAGAAGACCAAACCAACAACGGATC
AACAGACGAGGCCAAGGATAGTGTGAGTTCCGCTGGTAAATTTCGACTTG
AGCCATACGGTTGGTGTAAGAACCGGACGGATGGACATATTATACCACAA
AGGAGAAGAGACTGCCTTTATACATCACTGTTTTGTTTGTTTTGTTGTTT
TGTGTTTTGGGGTAGGGTAAAGGGGTGGGGGAGGTTGAACAAACGCGTCG
TTCAAAAATTCACCTCACCTACCGCATGTCGTTCCTGGTATCACGAGTTA
AAGATATGCGCCGCATCAGCACACGCTGACCAGTCCCCTTCATGGAATCA
CAACACAAGCATGCGCTGGGTAACTTTGGCGCGCCGTGGTTCCCCTCTAG
CCCTTATTGAGCCCGACTTTCTGTTGCTTCAGCCCCCTCTTCCTCGTGGT
ATACGCACAAGTACACCACATGGTTTGCACGTGCCCGTAAACCTGACTTG
GAACCGTGTATATTGACTTTCACGCCTTCTCTCATAGCAGGGCGCACTTC
CCCCTTCCCTCTGCCCCGATACAGCGCAAAGCGACGCCAGCAGTCATCAT
GAGAGTCCTCCTTCCGCCCCTGTTCTTGTGCATGGGCGCGCTTAATGTCA
AGGCGGACGAAGTAATCACGACCCCGCCCCAAGCCCTGCACAGCCACCTG
CTGGGAAACCAAATGAGCGACAGCGAGCCCACCCGCGGCCTCACGATTAT
CGATCAGGAAGCCCAGCGTCGCCTTGACCTTCAGCCCGAGCTGAAGCCGG
ACGTGGCTGACGCAAGCAGTCAACTGCTGGACCAAATCGGCCCGCAGGCG
AGTACATCGGCCATACCCCAGAAGCCGGTGTTAGCTTCCTCTAAAGTGGT
CAGTGTACCCGTACCCGGAGACAAATCTATGCCCGCGCAGAACCCCAACG
TGACTGGACAGCAGGGT back to topprotein sequence of jgi.p|Nanoce1779_2|606646 >mRNA_9141-protein ID=mRNA_9141-protein|Name=jgi.p|Nanoce1779_2|606646|organism=Nannochloropsis oceanica|type=polypeptide|length=174bp
MHGARTIMLPIEDQTNNGSTDEAKDSVSSAGKFRLEPYGWCKNRTDGHII
PQRRRDCLYTSLFCLFCCFVFWGRVKGWGRLNKRVVQKFTSPTACRSWYH
ELKICAASAHADQSPSWNHNTSMRWVTLARRGSPLALIEPDFLLLQPPLP
RGIRTSTPHGLHVPVNLTWNRVY* back to topmRNA from alignment at scaffold_36:45204..46720- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9141 ID=mRNA_9141|Name=jgi.p|Nanoce1779_2|606646|organism=Nannochloropsis oceanica|type=mRNA|length=1517bp|location=Sequence derived from alignment at scaffold_36:45204..46720- (Nannochloropsis oceanica)
TATCAATGTTTTGTTTTTGGTTCTTTTCTTTCGTATCTTGATCTCTTTTT
GGAGCCGTGCTTGACGAAGTGCATCTGCACGGTGGGCCAGTAGATGCAGG
GAAAGGATGCAAAGGCGGCATTCATCAATTAGAGACCGAACGAAAGAGAG
AGAGCGCATGTCAAGAAGTATTTGTTTTAATTTCACAATATGAGTTGTAT
CGCGCATATGTCTCGAGTTCGTGTGAAATGCTAGAGGAACAGATGACAAC
GGTTCCGTGGGAAATTGCCTTCCTGGAAGAGATTGGAAAAAAGGTCACGC
GAAAGCACAGGGAGGCAAATTCCAAGGATATGAAGTAGTGGTATCACACA
TCTTGCTCTTGCTTGGTGGTTACCCATTGGCTGACATAAAGCGAAAAAAC
AGAAACCAGGGAGAAAGAGGAAATAAGAATGGAAGGGCGAAGGTGACACA
GCAGGAGAAGCTGATAAGGTGATTGGTTCAGCTACAATCGCTATATCATC
ACAATTCAAGAAAGAATGATTTAATTTGGCGGCAAGCATGGTCAATGCAC
GGTGCGAGAACAATAATGTTACCGATAGAAGACCAAACCAACAACGGATC
AACAGACGAGGCCAAGGATAGTGTGAGTTCCGCTGGTAAATTTCGACTTG
AGCCATACGGTTGGTGTAAGAACCGGACGGATGGACATATTATACCACAA
AGGAGAAGAGACTGCCTTTATACATCACTGTTTTGTTTGTTTTGTTGTTT
TGTGTTTTGGGGTAGGGTAAAGGGGTGGGGGAGGTTGAACAAACGCGTCG
TTCAAAAATTCACCTCACCTACCGCATGTCGTTCCTGGTATCACGAGTTA
AAGATATGCGCCGCATCAGCACACGCTGACCAGTCCCCTTCATGGAATCA
CAACACAAGCATGCGCTGGGTAACTTTGGCGCGCCGTGGTTCCCCTCTAG
CCCTTATTGAGCCCGACTTTCTGTTGCTTCAGCCCCCTCTTCCTCGTGGT
ATACGCACAAGTACACCACATGGTTTGCACGTGCCCGTAAACCTGACTTG
GAACCGTGTATATTGACTTTCACGCCTTCTCTCATAGCAGGGCGCACTTC
CCCCTTCCCTCTGCCCCGATACAGCGCAAAGCGACGCCAGCAGTCATCAT
GAGAGTCCTCCTTCCGCCCCTGTTCTTGTGCATGGGCGCGCTTAATGTCA
AGGCGGACGAAGTAATCACGACCCCGCCCCAAGCCCTGCACAGCCACCTG
CTGGGAAACCAAATGAGCGACAGCGAGCCCACCCGCGGCCTCACGATTAT
CGATCAGGAAGCCCAGCGTCGCCTTGACCTTCAGCCCGAGCTGAAGCCGG
ACGTGGCTGACGCAAGCAGTCAACTGCTGGACCAAATCGGCCCGCAGGCG
AGTACATCGGCCATACCCCAGAAGCCGGTGTTAGCTTCCTCTAAAGTGGT
CAGTGTACCCGTACCCGGAGACAAATCTATGCCCGCGCAGAACCCCAACG
TGACTGGACAGCAGGGT back to topCoding sequence (CDS) from alignment at scaffold_36:45204..46720- >mRNA_9141 ID=mRNA_9141|Name=jgi.p|Nanoce1779_2|606646|organism=Nannochloropsis oceanica|type=CDS|length=522bp|location=Sequence derived from alignment at scaffold_36:45204..46720- (Nannochloropsis oceanica)
ATGCACGGTGCGAGAACAATAATGTTACCGATAGAAGACCAAACCAACAA
CGGATCAACAGACGAGGCCAAGGATAGTGTGAGTTCCGCTGGTAAATTTC
GACTTGAGCCATACGGTTGGTGTAAGAACCGGACGGATGGACATATTATA
CCACAAAGGAGAAGAGACTGCCTTTATACATCACTGTTTTGTTTGTTTTG
TTGTTTTGTGTTTTGGGGTAGGGTAAAGGGGTGGGGGAGGTTGAACAAAC
GCGTCGTTCAAAAATTCACCTCACCTACCGCATGTCGTTCCTGGTATCAC
GAGTTAAAGATATGCGCCGCATCAGCACACGCTGACCAGTCCCCTTCATG
GAATCACAACACAAGCATGCGCTGGGTAACTTTGGCGCGCCGTGGTTCCC
CTCTAGCCCTTATTGAGCCCGACTTTCTGTTGCTTCAGCCCCCTCTTCCT
CGTGGTATACGCACAAGTACACCACATGGTTTGCACGTGCCCGTAAACCT
GACTTGGAACCGTGTATATTGA back to top
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