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Properties
| Property Name | Value |
|---|
| TranscriptId | 674181 |
| Track | FilteredModels2 |
| ProteinId | 674095 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:42709..45572 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9140 ID=mRNA_9140|Name=jgi.p|Nanoce1779_2|674095|organism=Nannochloropsis oceanica|type=mRNA|length=2756bp
ATGAGAGTCCTCCTTCCGCCCCTGTTCTTGTGCATGGGCGCGCTTAATGT
CAAGGCGGACGAAGTAATCACGACCCCGCCCCAAGCCCTGCACAGCCACC
TGCTGGGAAACCAAATGAGCGACAGCGAGCCCACCCGCGGCCTCACGATT
ATCGATCAGGAAGCCCAGCGTCGCCTTGACCTTCAGCCCGAGCTGAAGCC
GGACGTGGCTGACGCAAGCAGTCAACTGCTGGACCAAATCGGCCCGCAGG
CGAGTACATCGGCCATACCCCAGAAGCCGGTGTTAGCTTCCTCTAAAGTG
GTCAGTGTACCCGTACCCGGAGACAAATCTATGCCCGCGCAGAACCCCAA
CGTGACTGGACAGCAGGGTCAGCAGCAGCCGAATGGTATGTACGGGCCGC
CGATGCAGCCTGGGATGCAGGGACAGCAGCAGCCGGGTGGAATGTGGGGG
CCGCCGATGCAGCCTGGGATGCAGGGACAGCAGCAGCCGGGTGGAATGTG
GGGGCCGCCGATGCAGCCTGGGATGCAGGGACAGCAGCAGCCGAATGGTA
TGTGGGGGCCACCAATGCAGCCTGGGATGCAGGGACAGCAGCAGCCGGGT
GGAATGTGGGGGCCGCCGATGCAGCCTGGGATGCAGGGTGGTCAGCAGCC
GAATGGTATCTACGGACAGCCGATCCAGCCTGGGATGCAGGGTGGTCAGC
AGCCGAATGGTATCTACGGGCAGCCGATGCAGCCTGGGATGCAGGGTGGC
CAGCAGCCGAATGGTATCTACGGACGGCCGATCCAACCCGGGATGCAGGG
ACAGCAGCAGCCGGGGATGCCGGGACAGCAGCAGCCCAGTAGTATCTACG
GGCAGCCGATGCAGCCTGGGATGCAGGGTGGTCAGCAGCCGAATGGTATC
TACGGGCAGCCGATCCAACCCGGGATGCCGGGACAGCAGCAGCCGGGGAT
GCCGGGACAGCAGCAGCCCAGTGGTATCTACGGACAGCCGATGCAGCCTG
GGATGCAGCAGGCGGGCATGAACTCACAGCAGAAACCTGCCACTAAGAAG
CAAGCAGACACGTCGAAACAAGCTGAGAATCACGAGAGAAATGGCAAACG
GAGCTTGCGTGCATAAAGAGAGGGCAAGAGCAGAAGAAAGGAAGAAAGAG
CAAGAAAATAAGTATGTTGATGAATTGGGGACTGCCCCAAAAAGGAAGTG
CATATATCCAAAAGGGCCTATGGGTGAAAATAAGAAGTGTTTGACAGGAG
TAAATAGTCATAAATTTGAAGAAACAATTCTTGTTATTGTGAGTGTGAAG
GAAAGCATGTAGTTACATTTTTGTTGCTAGAGCTCACTTCGAATGAAAAA
TCCGTAATGCCAATCATATACAACGATCTGGAGGGCTGGCAATGTCGTCA
AATGAACCAGTAGGCTCCTAAATTTCTCATTATATATTTTGTGAGGTGAA
CGTCGTTTTCATCGCAGCCATGTTTGAGGCACGTATCTGCAAAGTCCGAT
GTGGATTGATTGGATATACTGACGGGCCATGCCTAGAATAATTGGGGAGA
TGAGGGCTGACGCAGATTCGACACTTGCGTGCCCCACTTTTCTTGGCAAG
GAAGCTGCCATTACTCACAAGAAAGGGAAAAAAACAGCCATACATCCTAT
TTAGGCAAGCGTCGATGGCCCTTGATGTCTGCGTGAGGGACAACGTAGGC
TTATCGTGTAATAAACATATTTGAGGCGGCTTGGCGCCAGCCAAAATTTA
CCCTTCAAAGTTCAGGGTAAAGACGCCTTGATACAGTTGACCTGCAATTT
TATCTGTAAGTGTCGCATGGTGCAACGATTCATCACAAACTCTGAAGGGA
ACTAGAAATGTGAGGGATTTTGCGACGCCGTGGTAGGATCTACTGCGCGA
ATCGCTTTAAAGGCCTAAGCACTTCTCTCTGCAGAGTCGGAGTAGAGGAG
ACACGTATTCTGGCAGGTTGCGAGCCGGGAAATCCTTACCCCGTAAATGT
GGGTGTCGTGGCTCTAGCTGAGGTATTGATAAAACCCACGTAGATCATGA
CAGTACTAGGCCCGGAGTATATATGGATTGGCGAAGACAAAAACTTCGCG
TTAGCCGAAGAAATTCGTCGGCTATGGTAGTTGGGATCACGTTGTCTTTG
AGAATGACGCATATACCGACAGATGCCTCTTAGATATCGTTATATTGGCA
TTTGCGATCGGAGCGCGCGGGCTGCCCATGCTGTATGTATCTGCTATTGG
GCGAATGACAGCCTGGAAGATTGGCGCCATAGTGGATACAGTCTTGAAAG
GATATCTGCGTGTCAAATCGGTTCAGTTGACGGGCTCGTGCTTCGACGGT
GATGATGCAAGAGAGGTGGTAGGAGGCATGTTTTAGGCGGTGAGACTGGT
GGTGAAGGTCGAGGTGCATCACGACGAGACGGAGAATAGTTGCGAGTGAG
AGGAATGATGATTGTTAAGGAAGGGACCTGTGAGATTCAATCGGATGTGA
ATCATCCCGCTGTCTTCGATAGGTACTTGAAACACGCTAAGTATATTGCG
ATGTGAATATAGCAGGGCTACTAGTCACTAGCGAAAGTTATACCTTTATT
TTCCATCAACAGTCACTTTGTACGCGAACCAGTACAACGCCAAGATGCTA
TGCTGTTCCTTGTCTGTTTGGTAGGGTAATTTTGCGAATGTGAGATCAAC
TATTGCAAAAATGCAGGCTAATGGCGTGGTGAACTTGGGCGATACGGAAA
GTTCGT back to topprotein sequence of jgi.p|Nanoce1779_2|674095 >mRNA_9140-protein ID=mRNA_9140-protein|Name=jgi.p|Nanoce1779_2|674095|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MRVLLPPLFLCMGALNVKADEVITTPPQALHSHLLGNQMSDSEPTRGLTI
IDQEAQRRLDLQPELKPDVADASSQLLDQIGPQASTSAIPQKPVLASSKV
VSVPVPGDKSMPAQNPNVTGQQGQQQPNGMYGPPMQPGMQGQQQPGGMWG
PPMQPGMQGQQQPGGMWGPPMQPGMQGQQQPNGMWGPPMQPGMQGQQQPG
GMWGPPMQPGMQGGQQPNGIYGQPIQPGMQGGQQPNGIYGQPMQPGMQGG
QQPNGIYGRPIQPGMQGQQQPGMPGQQQPSSIYGQPMQPGMQGGQQPNGI
YGQPIQPGMPGQQQPGMPGQQQPSGIYGQPMQPGMQQAGMNSQQKPATKK
QADTSKQAENHERNGKRSLRA* back to topmRNA from alignment at scaffold_36:42709..45572- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9140 ID=mRNA_9140|Name=jgi.p|Nanoce1779_2|674095|organism=Nannochloropsis oceanica|type=mRNA|length=2864bp|location=Sequence derived from alignment at scaffold_36:42709..45572- (Nannochloropsis oceanica)
ATGAGAGTCCTCCTTCCGCCCCTGTTCTTGTGCATGGGCGCGCTTAATGT
CAAGGCGGACGAAGTAATCACGACCCCGCCCCAAGCCCTGCACAGCCACC
TGCTGGGAAACCAAATGAGCGACAGCGAGCCCACCCGCGGCCTCACGATT
ATCGATCAGGAAGCCCAGCGTCGCCTTGACCTTCAGCCCGAGCTGAAGCC
GGACGTGGCTGACGCAAGCAGTCAACTGCTGGACCAAATCGGCCCGCAGG
CGAGTACATCGGCCATACCCCAGAAGCCGGTGTTAGCTTCCTCTAAAGTG
GTCAGTGTACCCGTACCCGGAGACAAATCTATGCCCGCGCAGAACCCCAA
CGTGACTGGACAGCAGGGTCAGCAGCAGCCGAATGGTATGTACGGGCCGC
CGATGCAGCCTGGGATGCAGGGACAGCAGCAGCCGGGTGGAATGTGGGGG
CCGCCGATGCAGCCTGGGATGCAGGGACAGCAGCAGCCGGGTGGAATGTG
GGGGCCGCCGATGCAGCCTGGGATGCAGGGACAGCAGCAGCCGAATGGTA
TGTGGGGGCCACCAATGCAGCCTGGGATGCAGGGACAGCAGCAGCCGGGT
GGAATGTGGGGGCCGCCGATGCAGCCTGGGATGCAGGGTGGTCAGCAGCC
GAATGGTATCTACGGACAGCCGATCCAGCCTGGGATGCAGGGTGGTCAGC
AGCCGAATGGTATCTACGGGCAGCCGATGCAGCCTGGGATGCAGGGTGGC
CAGCAGCCGAATGGTATCTACGGACGGCCGATCCAACCCGGGATGCAGGG
ACAGCAGCAGCCGGGGATGCCGGGACAGCAGCAGCCCAGTAGTATCTACG
GGCAGCCGATGCAGCCTGGGATGCAGGGTGGTCAGCAGCCGAATGGTATC
TACGGGCAGCCGATCCAACCCGGGATGCCGGGACAGCAGCAGCCGGGGAT
GCCGGGACAGCAGCAGCCCAGTGGTATCTACGGACAGCCGATGCAGCCTG
GGATGCAGGGTGGTCAGCAGCCGAATGGTATCTACGGGCAGCCAATGCAG
CCGGGGATGCCGGGACAGCAGCAGCCCGGTGGTATCTACGGACAGCCGAT
GCAGCCTGGGATGCAGCAGGCGGGCATGAACTCACAGCAGAAACCTGCCA
CTAAGAAGCAAGCAGACACGTCGAAACAAGCTGAGAATCACGAGAGAAAT
GGCAAACGGAGCTTGCGTGCATAAAGAGAGGGCAAGAGCAGAAGAAAGGA
AGAAAGAGCAAGAAAATAAGTATGTTGATGAATTGGGGACTGCCCCAAAA
AGGAAGTGCATATATCCAAAAGGGCCTATGGGTGAAAATAAGAAGTGTTT
GACAGGAGTAAATAGTCATAAATTTGAAGAAACAATTCTTGTTATTGTGA
GTGTGAAGGAAAGCATGTAGTTACATTTTTGTTGCTAGAGCTCACTTCGA
ATGAAAAATCCGTAATGCCAATCATATACAACGATCTGGAGGGCTGGCAA
TGTCGTCAAATGAACCAGTAGGCTCCTAAATTTCTCATTATATATTTTGT
GAGGTGAACGTCGTTTTCATCGCAGCCATGTTTGAGGCACGTATCTGCAA
AGTCCGATGTGGATTGATTGGATATACTGACGGGCCATGCCTAGAATAAT
TGGGGAGATGAGGGCTGACGCAGATTCGACACTTGCGTGCCCCACTTTTC
TTGGCAAGGAAGCTGCCATTACTCACAAGAAAGGGAAAAAAACAGCCATA
CATCCTATTTAGGCAAGCGTCGATGGCCCTTGATGTCTGCGTGAGGGACA
ACGTAGGCTTATCGTGTAATAAACATATTTGAGGCGGCTTGGCGCCAGCC
AAAATTTACCCTTCAAAGTTCAGGGTAAAGACGCCTTGATACAGTTGACC
TGCAATTTTATCTGTAAGTGTCGCATGGTGCAACGATTCATCACAAACTC
TGAAGGGAACTAGAAATGTGAGGGATTTTGCGACGCCGTGGTAGGATCTA
CTGCGCGAATCGCTTTAAAGGCCTAAGCACTTCTCTCTGCAGAGTCGGAG
TAGAGGAGACACGTATTCTGGCAGGTTGCGAGCCGGGAAATCCTTACCCC
GTAAATGTGGGTGTCGTGGCTCTAGCTGAGGTATTGATAAAACCCACGTA
GATCATGACAGTACTAGGCCCGGAGTATATATGGATTGGCGAAGACAAAA
ACTTCGCGTTAGCCGAAGAAATTCGTCGGCTATGGTAGTTGGGATCACGT
TGTCTTTGAGAATGACGCATATACCGACAGATGCCTCTTAGATATCGTTA
TATTGGCATTTGCGATCGGAGCGCGCGGGCTGCCCATGCTGTATGTATCT
GCTATTGGGCGAATGACAGCCTGGAAGATTGGCGCCATAGTGGATACAGT
CTTGAAAGGATATCTGCGTGTCAAATCGGTTCAGTTGACGGGCTCGTGCT
TCGACGGTGATGATGCAAGAGAGGTGGTAGGAGGCATGTTTTAGGCGGTG
AGACTGGTGGTGAAGGTCGAGGTGCATCACGACGAGACGGAGAATAGTTG
CGAGTGAGAGGAATGATGATTGTTAAGGAAGGGACCTGTGAGATTCAATC
GGATGTGAATCATCCCGCTGTCTTCGATAGGTACTTGAAACACGCTAAGT
ATATTGCGATGTGAATATAGCAGGGCTACTAGTCACTAGCGAAAGTTATA
CCTTTATTTTCCATCAACAGTCACTTTGTACGCGAACCAGTACAACGCCA
AGATGCTATGCTGTTCCTTGTCTGTTTGGTAGGGTAATTTTGCGAATGTG
AGATCAACTATTGCAAAAATGCAGGCTAATGGCGTGGTGAACTTGGGCGA
TACGGAAAGTTCGT back to topCoding sequence (CDS) from alignment at scaffold_36:42709..45572- >mRNA_9140 ID=mRNA_9140|Name=jgi.p|Nanoce1779_2|674095|organism=Nannochloropsis oceanica|type=CDS|length=2232bp|location=Sequence derived from alignment at scaffold_36:42709..45572- (Nannochloropsis oceanica)
CAGGCGGGCATGAACTCACAGCAGAAACCTGCCACTAAGAAGCAAGCAGA
CACGTCGAAACAAGCTGAGAATCACGAGAGAAATGGCAAACGGAGCTTGC
GTGCATAAATGAGAGTCCTCCTTCCGCCCCTGTTCTTGTGCATGGGCGCG
CTTAATGTCAAGGCGGACGAAGTAATCACGACCCCGCCCCAAGCCCTGCA
CAGCCACCTGCTGGGAAACCAAATGAGCGACAGCGAGCCCACCCGCGGCC
TCACGATTATCGATCAGGAAGCCCAGCGTCGCCTTGACCTTCAGCCCGAG
CTGAAGCCGGACGTGGCTGACGCAAGCAGTCAACTGCTGGACCAAATCGG
CCCGCAGGCGAGTACATCGGCCATACCCCAGAAGCCGGTGTTAGCTTCCT
CTAAAGTGGTCAGTGTACCCGTACCCGGAGACAAATCTATGCCCGCGCAG
AACCCCAACGTGACTGGACAGCAGGGTCAGCAGCAGCCGAATGGTATGTA
CGGGCCGCCGATGCAGCCTGGGATGCAGGGACAGCAGCAGCCGGGTGGAA
TGTGGGGGCCGCCGATGCAGCCTGGGATGCAGGGACAGCAGCAGCCGGGT
GGAATGTGGGGGCCGCCGATGCAGCCTGGGATGCAGGGACAGCAGCAGCC
GAATGGTATGTGGGGGCCACCAATGCAGCCTGGGATGCAGGGACAGCAGC
AGCCGGGTGGAATGTGGGGGCCGCCGATGCAGCCTGGGATGCAGGGTGGT
CAGCAGCCGAATGGTATCTACGGACAGCCGATCCAGCCTGGGATGCAGGG
TGGTCAGCAGCCGAATGGTATCTACGGGCAGCCGATGCAGCCTGGGATGC
AGGGTGGCCAGCAGCCGAATGGTATCTACGGACGGCCGATCCAACCCGGG
ATGCAGGGACAGCAGCAGCCGGGGATGCCGGGACAGCAGCAGCCCAGTAG
TATCTACGGGCAGCCGATGCAGCCTGGGATGCAGGGTGGTCAGCAGCCGA
ATGGTATCTACGGGCAGCCGATCCAACCCGGGATGCCGGGACAGCAGCAG
CCGGGGATGCCGGGACAGCAGCAGCCCAGTGGTATCTACGGACAGCCGAT
GCAGCCTGGGATGCAGCAGGCGGGCATGAACTCACAGCAGAAACCTGCCA
CTAAGAAGCAAGCAGACACGTCGAAACAAGCTGAGAATCACGAGAGAAAT
GGCAAACGGAGCTTGCGTGCATAAATGAGAGTCCTCCTTCCGCCCCTGTT
CTTGTGCATGGGCGCGCTTAATGTCAAGGCGGACGAAGTAATCACGACCC
CGCCCCAAGCCCTGCACAGCCACCTGCTGGGAAACCAAATGAGCGACAGC
GAGCCCACCCGCGGCCTCACGATTATCGATCAGGAAGCCCAGCGTCGCCT
TGACCTTCAGCCCGAGCTGAAGCCGGACGTGGCTGACGCAAGCAGTCAAC
TGCTGGACCAAATCGGCCCGCAGGCGAGTACATCGGCCATACCCCAGAAG
CCGGTGTTAGCTTCCTCTAAAGTGGTCAGTGTACCCGTACCCGGAGACAA
ATCTATGCCCGCGCAGAACCCCAACGTGACTGGACAGCAGGGTCAGCAGC
AGCCGAATGGTATGTACGGGCCGCCGATGCAGCCTGGGATGCAGGGACAG
CAGCAGCCGGGTGGAATGTGGGGGCCGCCGATGCAGCCTGGGATGCAGGG
ACAGCAGCAGCCGGGTGGAATGTGGGGGCCGCCGATGCAGCCTGGGATGC
AGGGACAGCAGCAGCCGAATGGTATGTGGGGGCCACCAATGCAGCCTGGG
ATGCAGGGACAGCAGCAGCCGGGTGGAATGTGGGGGCCGCCGATGCAGCC
TGGGATGCAGGGTGGTCAGCAGCCGAATGGTATCTACGGACAGCCGATCC
AGCCTGGGATGCAGGGTGGTCAGCAGCCGAATGGTATCTACGGGCAGCCG
ATGCAGCCTGGGATGCAGGGTGGCCAGCAGCCGAATGGTATCTACGGACG
GCCGATCCAACCCGGGATGCAGGGACAGCAGCAGCCGGGGATGCCGGGAC
AGCAGCAGCCCAGTAGTATCTACGGGCAGCCGATGCAGCCTGGGATGCAG
GGTGGTCAGCAGCCGAATGGTATCTACGGGCAGCCGATCCAACCCGGGAT
GCCGGGACAGCAGCAGCCGGGGATGCCGGGACAGCAGCAGCCCAGTGGTA
TCTACGGACAGCCGATGCAGCCTGGGATGCAG back to top
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