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Properties
Property Name | Value |
TranscriptId | 606725 |
Track | FilteredModels2 |
ProteinId | 606639 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_36 | supercontig | scaffold_36:40414..42725 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9139 ID=mRNA_9139|Name=jgi.p|Nanoce1779_2|606639|organism=Nannochloropsis oceanica|type=mRNA|length=1456bp AGATCATGCCAATCTCCCTTCCAGCCTCGATGGCCTCGGCCCCCCTTCCC CTCCTCATCACCAGTGCCGTCTTACTCACCCTCATCATCATTTTCGTCCT CTTTTTCCGGGTCTTCGTGTCTCCGGCTCCTTTGAATCTGAAGGGGAAAG TGGTGCTTATCACTGGTGGCTCAAGTGGCATTGGGAAGGCTGTTGCCAAA GAGGCTCTAGGCCAAGGTGCACAGCTCATCCTCCTCGCCCGCTCCATGCC CAAGCTTGAGGAGGCACAACGCGAGCTCTATGCCTCTCTCCCTTCCCACC TCCCTCCCCCTTCTATCATCTTGATCTCTCAGGACGTTTCGGAAGGGGTT GCGCCCCTGGCTGATGCGCTCTGTGGCCCCGTCAAGGCCGTGGGAGGGAA GGTTGACGTGCTGATTAATTGTGCAGGGACATCTGTTTCTGGTGCCTTTG ATGCCCTTCCTGAAGCTGCCTTTCACGACATGTACAAGGCGAACGTTTTA GGCAGCATTTGTCCCACCCGCGCCGTTCTGCCCTATATGAAAGACCAGCG CTCCGGCTCCATCGTCTTCGTTTCCTCCCAAGCAGGACAAGTTGGCATTT GGGGATATTCAGCTTACAGCGCATCGAAATTCGCTCTCCGTGGCCTGGCA CAGGCCCTACAAATGGAGGTCCACCCTTTTAACATTTTTGTCTCAATCGT CTACCCGCCAGACACGGACACGCCCGGCTTCGAGACGGAAAACGAGAGCA AGCCCACAGAGACGGCCCTCATCTCCGGTCCAGGCAACGTCTTTGAAGCT TCTCACGTCGCGCGCGATCTGCTCTCGGGAGTGAAAAATCGGACTTTTTC CATCACCACCGGCCTGGATGGATTCCTGCTGGGCACCCTCTCCTGTGGAA TGGAGCCTGTCTTCGCCTTCGTTCCCGCCCTCCTTCAATGCCTCTTATGT TCGCTCTTCCGTTTTGTCTCCTTGTTTTACATTTTTGATTTTTACCGCGT CGCCCACAAATGCCACGCCGCACCTCCCTCCTTCGCTCCCTCCCTCCCAC CCCTGGCCGCTGTGTCCTCAGGGACGGCTGCGGTACAGGCAGAGGAGGAA GGGGAAGAAAAGAGGGAGGATAAGAGAGGAGGAAGATGGAAGCTTGGGCT GACAAAGCGGATATCAAATCAGCAGTAGTCGGCGGAAAGCCTTATCTGTT AACTCCCTCCCGCCCCCGTTCCTCCTCTCTATAGGAAGGGGAAGAGAAAC GTAAATCCATTCTCGGAAGAGGATAACTGTAAATACCTTAGGAATTCCCG GAAATAAAGCAAAACGAATAGAGAGAAGGAAAAGAGGGGGAAGAATGTCT AAGGAAATCAAATTACACCCGTTCCCCCAGCTTCCACTGTCTTGTTGAAC TTATGTTTCTTGGTTTCGACGACCACTTTTCTATGCCTCACGAACTTTCC GTATCG back to topprotein sequence of jgi.p|Nanoce1779_2|606639 >mRNA_9139-protein ID=mRNA_9139-protein|Name=jgi.p|Nanoce1779_2|606639|organism=Nannochloropsis oceanica|type=polypeptide|length=391bp MPISLPASMASAPLPLLITSAVLLTLIIIFVLFFRVFVSPAPLNLKGKVV LITGGSSGIGKAVAKEALGQGAQLILLARSMPKLEEAQRELYASLPSHLP PPSIILISQDVSEGVAPLADALCGPVKAVGGKVDVLINCAGTSVSGAFDA LPEAAFHDMYKANVLGSICPTRAVLPYMKDQRSGSIVFVSSQAGQVGIWG YSAYSASKFALRGLAQALQMEVHPFNIFVSIVYPPDTDTPGFETENESKP TETALISGPGNVFEASHVARDLLSGVKNRTFSITTGLDGFLLGTLSCGME PVFAFVPALLQCLLCSLFRFVSLFYIFDFYRVAHKCHAAPPSFAPSLPPL AAVSSGTAAVQAEEEGEEKREDKRGGRWKLGLTKRISNQQ* back to topmRNA from alignment at scaffold_36:40414..42725+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9139 ID=mRNA_9139|Name=jgi.p|Nanoce1779_2|606639|organism=Nannochloropsis oceanica|type=mRNA|length=2312bp|location=Sequence derived from alignment at scaffold_36:40414..42725+ (Nannochloropsis oceanica) AGATCATGCCAATCTCCCTTCCAGCCTCGATGGCCTCGGCCCCCCTTCCC
CTCCTCATCACCAGTGCCGTCTTACTCACCCTCATCATCATTTTCGTCCT
CTTTTTCCGGGTCTTCGTGTCTCCGGCTCCTTTGAATCTGAAGGGGAAAG
TGGTGCTTATCACTGGTGGCTCAAGTGGCATTGGGAAGGCTGTTGCCAAA
GTAAGGAACGGGGAGGGGGGGTTCGGAAAAAGAAGGAAAGGCAGGAGGCG
AATATCAAGTACAAAATTAGTCCTCCAATCACCATCCACTCACTGCCCCT
CCCTCCCTCCCCTCCCCTCTATTTCCTCACAGGAGGCTCTAGGCCAAGGT
GCACAGCTCATCCTCCTCGCCCGCTCCATGCCCAAGCTTGAGGAGGCACA
ACGCGAGCTCTATGCCTCTCTCCCTTCCCACCTCCCTCCCCCTTCTATCA
TCTTGATCTCTCAGGACGTTTCGGAAGGGGTTGCGCCCCTGGCTGATGCG
CTCTGTGGCCCCGTCAAGGCCGTGGGAGGGAAGGTTGACGTGCTGATTAA
TTGTGCAGGGACATCTGTTTCTGGTGCCTTTGATGCCCTTCCTGAAGCTG
CCTTTCACGACATGTACAAGGTACGTGTCTTCCTTTACCATCCATCCCTG
TAATAGAATTAGGACCCTCTCTGGTACGGCCTTGTGGGGTTTAATATAAA
CTATATCATTCATTTTTTTTATTTTTGTGTGTATTTTTTTTGTTTACTCG
TTCAATTTATAAAATATCAGTTAATATATAAATATATATACATACACATA
AATGGTTTTTACCTTCATATTTTACATTCGTTCAAATTCATTTTCTTTTT
ATTCATTAAAAAGAAAAATTATGTATTTTCACCAAGCAGGCGTTTGTTTT
TACTTGCCTTATTATTCATTCATTCTTTACGCATGTATCTACCTGTACAC
CTCTTTACAGGCGAACGTTTTAGGCAGCATTTGTCCCACCCGCGCCGTTC
TGCCCTATATGAAAGACCAGCGCTCCGGCTCCATCGTCTTCGTTTCCTCC
CAAGCAGGACAAGTTGGCATTTGGGGATATTCAGCTTACAGCGCATCGAA
ATTCGCTCTCCGTGGCCTGGCACAGGCCCTACAAATGGAGGTACGTCCTG
ATCCTTTTTCCCTCCCTCCCTCCCTCCTCCCCTCCTCTCCTCCACTTTTC
ACATTGCGTAGTTCGCGCAGCCCTTCCACGTGACCTCCTTCCCTCCCTCC
CGTCCCTCCTTCTTTCCCTCCCTTTCCTCTTCCCAACTCAGCCACTCCTT
CCTTCCTTCCTTCCTTTCTTCCTTCCTTCCCTCCTTCTTTCCCTCCCTCG
CTCCCTTCTTCAGGTCCACCCTTTTAACATTTTTGTCTCAATCGTCTACC
CGCCAGACACGGACACGCCCGGCTTCGAGGTGAGATAGGAGGGAAGGAGG
AAGGAGGGAGAGAGGAAAGAACTTACTGTGACCCCGTCCAAATTCGTTTT
CCCGTAAAGAATCTGCTCATTTTCATCTTCAGCACATCATCATGTCTACT
CCTCCCAACGCCCCCCCCCCACCATCACCAAAATGAACAGACGGAAAACG
AGAGCAAGCCCACAGAGACGGCCCTCATCTCCGGTCCAGGCAACGTCTTT
GAAGCTTCTCACGTCGCGCGCGATCTGCTCTCGGGAGTGAAAAATCGGAC
TTTTTCCATCACCACCGGCCTGGATGGATTCCTGCTGGGCACCCTCTCCT
GTGGAATGGAGCCTGTCTTCGCCTTCGTTCCCGCCCTCCTTCAATGCCTC
TTATGTTCGCTCTTCCGTTTTGTCTCCTTGTTTTACATTTTTGATTTTTA
CCGCGTCGCCCACAAATGCCACGCCGCACCTCCCTCCTTCGCTCCCTCCC
TCCCACCCCTGGCCGCTGTGTCCTCAGGGACGGCTGCGGTACAGGCAGAG
GAGGAAGGGGAAGAAAAGAGGGAGGATAAGAGAGGAGGAAGATGGAAGCT
TGGGCTGACAAAGCGGATATCAAATCAGCAGTAGTCGGCGGAAAGCCTTA
TCTGTTAACTCCCTCCCGCCCCCGTTCCTCCTCTCTATAGGAAGGGGAAG
AGAAACGTAAATCCATTCTCGGAAGAGGATAACTGTAAATACCTTAGGAA
TTCCCGGAAATAAAGCAAAACGAATAGAGAGAAGGAAAAGAGGGGGAAGA
ATGTCTAAGGAAATCAAATTACACCCGTTCCCCCAGCTTCCACTGTCTTG
TTGAACTTATGTTTCTTGGTTTCGACGACCACTTTTCTATGCCTCACGAA
CTTTCCGTATCG back to topCoding sequence (CDS) from alignment at scaffold_36:40414..42725+ >mRNA_9139 ID=mRNA_9139|Name=jgi.p|Nanoce1779_2|606639|organism=Nannochloropsis oceanica|type=CDS|length=5865bp|location=Sequence derived from alignment at scaffold_36:40414..42725+ (Nannochloropsis oceanica) ATGCCAATCTCCCTTCCAGCCTCGATGGCCTCGGCCCCCCTTCCCCTCCT CATCACCAGTGCCGTCTTACTCACCCTCATCATCATTTTCGTCCTCTTTT TCCGGGTCTTCGTGTCTCCGGCTCCTTTGAATCTGAAGGGGAAAGTGGTG CTTATCACTGGTGGCTCAAGTGGCATTGGGAAGGCTGTTGCCAAAGAGGC TCTAGGCCAAGGTGCACAGCTCATCCTCCTCGCCCGCTCCATGCCCAAGC TTGAGGAGGCACAACGCGAGCTCTATGCCTCTCTCCCTTCCCACCTCCCT CCCCCTTCTATCATCTTGATCTCTCAGGACGTTTCGGAAGGGGTTGCGCC CCTGGCTGATGCGCTCTGTGGCCCCGTCAAGGCCGTGGGAGGGAAGGTTG ACGTGCTGATTAATTGTGCAGGGACATCTGTTTCTGGTGCCTTTGATGCC CTTCCTGAAGCTGCCTTTCACGACATGTACAAGGCGAACGTTTTAGGCAG CATTTGTCCCACCCGCGCCGTTCTGCCCTATATGAAAGACCAGCGCTCCG GCTCCATCGTCTTCGTTTCCTCCCAAGCAGGACAAGTTGGCATTTGGGGA TATTCAGCTTACAGCGCATCGAAATTCGCTCTCCGTGGCCTGGCACAGGC CCTACAAATGGAGGTCCACCCTTTTAACATTTTTGTCTCAATCGTCTACC CGCCAGACACGGACACGCCCGGCTTCGAGACGGAAAACGAGAGCAAGCCC ACAGAGACGGCCCTCATCTCCGGTCCAGGCAACGTCTTTGAAGCTTCTCA CGTCGCGCGCGATCTGCTCTCGGGAGTGAAAAATCGGACTTTTTCCATCA CCACCGGCCTGGATGGATTCCTGCTGGGCACCCTCTCCTGTGGAATGGAG CCTGTCTTCGCCTTCGTTCCCGCCCTCCTTCAATGCCTCTTATGTTCGCT CTTCCGTTTTGTCTCCTTGTTTTACATTTTTGATTTTTACCGCGTCGCCC ACAAATGCCACGCCGCACCTCCCTCCTTCGCTCCCTCCCTCCCACCCCTG GCCGCTGTGTCCTCAGGGACGGCTGCGGTACAGGCAGAGGAGGAAGGGGA AGAAAAGAGGGAGGATAAGAGAGGAGGAAGATGGAAGCTTGGGCTGACAA AGCGGATATCAAATCAGCAGTAGATGCCAATCTCCCTTCCAGCCTCGATG GCCTCGGCCCCCCTTCCCCTCCTCATCACCAGTGCCGTCTTACTCACCCT CATCATCATTTTCGTCCTCTTTTTCCGGGTCTTCGTGTCTCCGGCTCCTT TGAATCTGAAGGGGAAAGTGGTGCTTATCACTGGTGGCTCAAGTGGCATT GGGAAGGCTGTTGCCAAAGAGGCTCTAGGCCAAGGTGCACAGCTCATCCT CCTCGCCCGCTCCATGCCCAAGCTTGAGGAGGCACAACGCGAGCTCTATG CCTCTCTCCCTTCCCACCTCCCTCCCCCTTCTATCATCTTGATCTCTCAG GACGTTTCGGAAGGGGTTGCGCCCCTGGCTGATGCGCTCTGTGGCCCCGT CAAGGCCGTGGGAGGGAAGGTTGACGTGCTGATTAATTGTGCAGGGACAT CTGTTTCTGGTGCCTTTGATGCCCTTCCTGAAGCTGCCTTTCACGACATG TACAAGGCGAACGTTTTAGGCAGCATTTGTCCCACCCGCGCCGTTCTGCC CTATATGAAAGACCAGCGCTCCGGCTCCATCGTCTTCGTTTCCTCCCAAG CAGGACAAGTTGGCATTTGGGGATATTCAGCTTACAGCGCATCGAAATTC GCTCTCCGTGGCCTGGCACAGGCCCTACAAATGGAGGTCCACCCTTTTAA CATTTTTGTCTCAATCGTCTACCCGCCAGACACGGACACGCCCGGCTTCG AGACGGAAAACGAGAGCAAGCCCACAGAGACGGCCCTCATCTCCGGTCCA GGCAACGTCTTTGAAGCTTCTCACGTCGCGCGCGATCTGCTCTCGGGAGT GAAAAATCGGACTTTTTCCATCACCACCGGCCTGGATGGATTCCTGCTGG GCACCCTCTCCTGTGGAATGGAGCCTGTCTTCGCCTTCGTTCCCGCCCTC CTTCAATGCCTCTTATGTTCGCTCTTCCGTTTTGTCTCCTTGTTTTACAT TTTTGATTTTTACCGCGTCGCCCACAAATGCCACGCCGCACCTCCCTCCT TCGCTCCCTCCCTCCCACCCCTGGCCGCTGTGTCCTCAGGGACGGCTGCG GTACAGGCAGAGGAGGAAGGGGAAGAAAAGAGGGAGGATAAGAGAGGAGG AAGATGGAAGCTTGGGCTGACAAAGCGGATATCAAATCAGCAGTAGATGC CAATCTCCCTTCCAGCCTCGATGGCCTCGGCCCCCCTTCCCCTCCTCATC ACCAGTGCCGTCTTACTCACCCTCATCATCATTTTCGTCCTCTTTTTCCG GGTCTTCGTGTCTCCGGCTCCTTTGAATCTGAAGGGGAAAGTGGTGCTTA TCACTGGTGGCTCAAGTGGCATTGGGAAGGCTGTTGCCAAAGAGGCTCTA GGCCAAGGTGCACAGCTCATCCTCCTCGCCCGCTCCATGCCCAAGCTTGA GGAGGCACAACGCGAGCTCTATGCCTCTCTCCCTTCCCACCTCCCTCCCC CTTCTATCATCTTGATCTCTCAGGACGTTTCGGAAGGGGTTGCGCCCCTG GCTGATGCGCTCTGTGGCCCCGTCAAGGCCGTGGGAGGGAAGGTTGACGT GCTGATTAATTGTGCAGGGACATCTGTTTCTGGTGCCTTTGATGCCCTTC CTGAAGCTGCCTTTCACGACATGTACAAGGCGAACGTTTTAGGCAGCATT TGTCCCACCCGCGCCGTTCTGCCCTATATGAAAGACCAGCGCTCCGGCTC CATCGTCTTCGTTTCCTCCCAAGCAGGACAAGTTGGCATTTGGGGATATT CAGCTTACAGCGCATCGAAATTCGCTCTCCGTGGCCTGGCACAGGCCCTA CAAATGGAGGTCCACCCTTTTAACATTTTTGTCTCAATCGTCTACCCGCC AGACACGGACACGCCCGGCTTCGAGACGGAAAACGAGAGCAAGCCCACAG AGACGGCCCTCATCTCCGGTCCAGGCAACGTCTTTGAAGCTTCTCACGTC GCGCGCGATCTGCTCTCGGGAGTGAAAAATCGGACTTTTTCCATCACCAC CGGCCTGGATGGATTCCTGCTGGGCACCCTCTCCTGTGGAATGGAGCCTG TCTTCGCCTTCGTTCCCGCCCTCCTTCAATGCCTCTTATGTTCGCTCTTC CGTTTTGTCTCCTTGTTTTACATTTTTGATTTTTACCGCGTCGCCCACAA ATGCCACGCCGCACCTCCCTCCTTCGCTCCCTCCCTCCCACCCCTGGCCG CTGTGTCCTCAGGGACGGCTGCGGTACAGGCAGAGGAGGAAGGGGAAGAA AAGAGGGAGGATAAGAGAGGAGGAAGATGGAAGCTTGGGCTGACAAAGCG GATATCAAATCAGCAGTAGATGCCAATCTCCCTTCCAGCCTCGATGGCCT CGGCCCCCCTTCCCCTCCTCATCACCAGTGCCGTCTTACTCACCCTCATC ATCATTTTCGTCCTCTTTTTCCGGGTCTTCGTGTCTCCGGCTCCTTTGAA TCTGAAGGGGAAAGTGGTGCTTATCACTGGTGGCTCAAGTGGCATTGGGA AGGCTGTTGCCAAAGAGGCTCTAGGCCAAGGTGCACAGCTCATCCTCCTC GCCCGCTCCATGCCCAAGCTTGAGGAGGCACAACGCGAGCTCTATGCCTC TCTCCCTTCCCACCTCCCTCCCCCTTCTATCATCTTGATCTCTCAGGACG TTTCGGAAGGGGTTGCGCCCCTGGCTGATGCGCTCTGTGGCCCCGTCAAG GCCGTGGGAGGGAAGGTTGACGTGCTGATTAATTGTGCAGGGACATCTGT TTCTGGTGCCTTTGATGCCCTTCCTGAAGCTGCCTTTCACGACATGTACA AGGCGAACGTTTTAGGCAGCATTTGTCCCACCCGCGCCGTTCTGCCCTAT ATGAAAGACCAGCGCTCCGGCTCCATCGTCTTCGTTTCCTCCCAAGCAGG ACAAGTTGGCATTTGGGGATATTCAGCTTACAGCGCATCGAAATTCGCTC TCCGTGGCCTGGCACAGGCCCTACAAATGGAGGTCCACCCTTTTAACATT TTTGTCTCAATCGTCTACCCGCCAGACACGGACACGCCCGGCTTCGAGAC GGAAAACGAGAGCAAGCCCACAGAGACGGCCCTCATCTCCGGTCCAGGCA ACGTCTTTGAAGCTTCTCACGTCGCGCGCGATCTGCTCTCGGGAGTGAAA AATCGGACTTTTTCCATCACCACCGGCCTGGATGGATTCCTGCTGGGCAC CCTCTCCTGTGGAATGGAGCCTGTCTTCGCCTTCGTTCCCGCCCTCCTTC AATGCCTCTTATGTTCGCTCTTCCGTTTTGTCTCCTTGTTTTACATTTTT GATTTTTACCGCGTCGCCCACAAATGCCACGCCGCACCTCCCTCCTTCGC TCCCTCCCTCCCACCCCTGGCCGCTGTGTCCTCAGGGACGGCTGCGGTAC AGGCAGAGGAGGAAGGGGAAGAAAAGAGGGAGGATAAGAGAGGAGGAAGA TGGAAGCTTGGGCTGACAAAGCGGATATCAAATCAGCAGTAGATGCCAAT CTCCCTTCCAGCCTCGATGGCCTCGGCCCCCCTTCCCCTCCTCATCACCA GTGCCGTCTTACTCACCCTCATCATCATTTTCGTCCTCTTTTTCCGGGTC TTCGTGTCTCCGGCTCCTTTGAATCTGAAGGGGAAAGTGGTGCTTATCAC TGGTGGCTCAAGTGGCATTGGGAAGGCTGTTGCCAAAGAGGCTCTAGGCC AAGGTGCACAGCTCATCCTCCTCGCCCGCTCCATGCCCAAGCTTGAGGAG GCACAACGCGAGCTCTATGCCTCTCTCCCTTCCCACCTCCCTCCCCCTTC TATCATCTTGATCTCTCAGGACGTTTCGGAAGGGGTTGCGCCCCTGGCTG ATGCGCTCTGTGGCCCCGTCAAGGCCGTGGGAGGGAAGGTTGACGTGCTG ATTAATTGTGCAGGGACATCTGTTTCTGGTGCCTTTGATGCCCTTCCTGA AGCTGCCTTTCACGACATGTACAAGGCGAACGTTTTAGGCAGCATTTGTC CCACCCGCGCCGTTCTGCCCTATATGAAAGACCAGCGCTCCGGCTCCATC GTCTTCGTTTCCTCCCAAGCAGGACAAGTTGGCATTTGGGGATATTCAGC TTACAGCGCATCGAAATTCGCTCTCCGTGGCCTGGCACAGGCCCTACAAA TGGAGGTCCACCCTTTTAACATTTTTGTCTCAATCGTCTACCCGCCAGAC ACGGACACGCCCGGCTTCGAGACGGAAAACGAGAGCAAGCCCACAGAGAC GGCCCTCATCTCCGGTCCAGGCAACGTCTTTGAAGCTTCTCACGTCGCGC GCGATCTGCTCTCGGGAGTGAAAAATCGGACTTTTTCCATCACCACCGGC CTGGATGGATTCCTGCTGGGCACCCTCTCCTGTGGAATGGAGCCTGTCTT CGCCTTCGTTCCCGCCCTCCTTCAATGCCTCTTATGTTCGCTCTTCCGTT TTGTCTCCTTGTTTTACATTTTTGATTTTTACCGCGTCGCCCACAAATGC CACGCCGCACCTCCCTCCTTCGCTCCCTCCCTCCCACCCCTGGCCGCTGT GTCCTCAGGGACGGCTGCGGTACAGGCAGAGGAGGAAGGGGAAGAAAAGA GGGAGGATAAGAGAGGAGGAAGATGGAAGCTTGGGCTGACAAAGCGGATA TCAAATCAGCAGTAG back to top
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