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Properties
| Property Name | Value |
|---|
| TranscriptId | 536672 |
| Track | FilteredModels2 |
| ProteinId | 536586 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:716695..719535 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_906 ID=mRNA_906|Name=jgi.p|Nanoce1779_2|536586|organism=Nannochloropsis oceanica|type=mRNA|length=2719bp
GCATCACCTCCACCGCATGGCGGCGTACAGGCAATGCCTCCATTCCTCCA
GATCAGAGTCGCATTTACATGCTTTATTCGCACTCTGACGATCCTCTGAT
TATCCTTTCTAATTTTCGAGGACAGTCTTCGTTGCCACTTCAGCTTGGAG
AGGCAGGGAGCGCGCCTCACCCCGCTCGTCAGAACCGCCCATACATCTGC
CCCTATTGTAGCCACCAAGGCGGAAACGAGCGCCATCAATCGAGAGAGCC
CCATACATAGTACGCCCCCATGGGCATCATCCGCCAACCATCCTCCTCGC
GGCAGCCTCTGTCCCTGCTACCGCCGCTGCTATCTCTCATCTTCTCACTC
TTGCTCTTCTTGAAAGCTTTCACCACCCCGGTGGAGGCTTTCACATTGCG
CGCTGCGAGTGTGGCGTATCCCATCCGGGTGGCCTTCCAAGGCGAGCCTG
GCGCCTACTCCGAAAAGGCCTTGCGCGAACTCTTGGGCCCGCACGTCCTT
GCCATTGGCAAGCCGTCGTTCGAAGATACTTTCAAGTCCGTCACCACCCG
GGAAGTGGACTATGCCGTGGTCCCAATTGAAAACTCGCTTGGCGGCTCCA
TACATGCCAACTACGATCTGTTGCTCCGGCACGAGCTGCACATCATCGGC
GAGCACGAATTCCGCGTGGAGCACTCCCTGCTGGCCCTACCTGGCGTCAA
GAGGGATGATATTAAGCGTGTTATGAGTCACCCGCAGGCCCTGGCGCAGT
GTGACGCCTACCTGCGGAACATGGGCGTTGCGCGAGAATCCATGTACGAC
ACGGCGGGGTCGGCCAAGATAATCGCCGAGCAGGGCCTGCGGGACTGTGC
GGCCATTGCCTCCGAGCTAGCCGGCACAACTTATGGTTTGGAGGTACTGG
ACTCGAACATTGAGGACGACGACAGCAACTTTACTCGTTTCCTCCTCCTG
TCCCGGCAGTCTATCTCCTCCCTCATCCCCCACAGCGTCCCGGCTAAGAC
CTCCATCGTCTTTATCACTCCGGATGCCCCCGGCGCGCTTTACAAGGCCC
TTGCCTGCTTCACCCTCCGGGATATTGACTTTTGTAAGATCGAGTCCCGG
CCTACCTCCCCGCAGCTCTTCCGCTTCCTTCAATTCCAGCAGCGGCAGAT
GAGAAGCTTCGGCGCGGGGAGGGGTGGCGAGCCGACCACGGGCACTGGCG
ACGACCACGACTTGCCTCGCTTCCGCTATTGCTTCTATCTAGATTTCATG
GCTTCCCAGCTAGACGAGCCCGCTCGTAACGCCCTATTGCAGCTGGAGGA
GCAGTCGCAGTATGTGCGTGTCCTGGGCTCCTTCCCCACCAAAGGGCAGC
TGCTGGGGCCTATCCGGGAATCTTTGGACTTGCTGGCCAAGGAGAGCGGG
GAGGCCGAAGGCCTGCTTATGCAAAAGGCCACAAGCATGGCCGCCCGCGG
ACCCCCACTTAAGGCCCCGGACCGCCTGAAGATTGGTGTGGTGGGCTTTG
GGAAGTTCGGACAGTTCCTGACCAAGACTTTCACCAAATTTCACGACGTG
AGCGTGGTCAGTCGGGACGACATGACCTCGGTGGCGGCCGACTTGGGCGT
GCCCTTCTTTCCGCTGTATGAGGCTACGGAGTTTTTCCGACAAGATTTGG
ATGTGATTGTATTGTCTGTCTCCATTCTAGCCTTTGAGGAGGTGTTGAAG
AGCCTGCCCGCCGACTCCTTGCGAGGCAAGCTGGTGGTGGACGTGCTGTC
GGTGAAGGTGCACCCCAAGACGGTCATGCTTGAGTCTCTGCCGGGCGATG
TGGACATCATCTGCACGCATCCCATGTTTGGGCCCGAATCAGGCAAGTTT
GGGTGGCAGAGCCTGCCCTTCGTTTATGAGCGGGTGCGTATCCAGGACAA
TTCTCGGGCGGAGCGCTTTTTGTCGATCTTTGAGATGGAACGCTGTAAGA
TGATTGAGATGAGCTGTGACACGCACGACAAGTACGCGGCGGATTCCCAG
TTTATCACGCACCTGACGGGCCGTATATTGGGCCAGCAGGGCCTGCAGCC
TACGCCCATCGACACGCGGGGCTTCCAGAGTGTGCTCAAGCTTGTGGACA
ACACGTGCCGAGACAGCTTCGACCTTTTCTACGGCCTCTTCAAGTACAAC
AAGCACAGCTCCGACCAGATTCAACGCCTCCGTGAAGCGTTTGCCAACGT
CGAGCGCCAGCTGGCTGCCAAAGAGGCTTATCTCGCCGCGCGCACCGAGA
TCATGCAGGACGAGCGCAAAAAGCTTTTCGCTGAATGCCGCACCCTCATC
CGGGAGGCCGTTGCCCAGTCGACCACAAACCCTCCTCCTCCCCCTCCTTT
GGTCTCCCCTCCTGTCTCCCTACCTCCTGCTACCACCACGGCCTCTGCTG
ATGTCGATGAGGACGTGCCACCACCACCAACGCCGACACAAAAGAAAAAA
GCACCAAGGACCCCCCCCCCCTCCGTCCTTCATAAACCCTACCCCCCCCA
AACTATAGCTCTGCGTCGATTCATCCTGTATGTCATGTTTTCAATATCTC
TCGGCGATAGGGTAGGGAGCTGCATGCTTTCGTCCCCACCCAGCGCACTT
CGAAGTTGAACCAAAAAGGGAGACACACTAGTCTCACCTCGCGCGCGACA
TTATCAAAGGATAGTGATCAGACGAGAAGTCAACCAACCAAAGAAAAATA
AGAAAAACAACCCAAGAAA back to topprotein sequence of jgi.p|Nanoce1779_2|536586 >mRNA_906-protein ID=mRNA_906-protein|Name=jgi.p|Nanoce1779_2|536586|organism=Nannochloropsis oceanica|type=polypeptide|length=780bp
MGIIRQPSSSRQPLSLLPPLLSLIFSLLLFLKAFTTPVEAFTLRAASVAY
PIRVAFQGEPGAYSEKALRELLGPHVLAIGKPSFEDTFKSVTTREVDYAV
VPIENSLGGSIHANYDLLLRHELHIIGEHEFRVEHSLLALPGVKRDDIKR
VMSHPQALAQCDAYLRNMGVARESMYDTAGSAKIIAEQGLRDCAAIASEL
AGTTYGLEVLDSNIEDDDSNFTRFLLLSRQSISSLIPHSVPAKTSIVFIT
PDAPGALYKALACFTLRDIDFCKIESRPTSPQLFRFLQFQQRQMRSFGAG
RGGEPTTGTGDDHDLPRFRYCFYLDFMASQLDEPARNALLQLEEQSQYVR
VLGSFPTKGQLLGPIRESLDLLAKESGEAEGLLMQKATSMAARGPPLKAP
DRLKIGVVGFGKFGQFLTKTFTKFHDVSVVSRDDMTSVAADLGVPFFPLY
EATEFFRQDLDVIVLSVSILAFEEVLKSLPADSLRGKLVVDVLSVKVHPK
TVMLESLPGDVDIICTHPMFGPESGKFGWQSLPFVYERVRIQDNSRAERF
LSIFEMERCKMIEMSCDTHDKYAADSQFITHLTGRILGQQGLQPTPIDTR
GFQSVLKLVDNTCRDSFDLFYGLFKYNKHSSDQIQRLREAFANVERQLAA
KEAYLAARTEIMQDERKKLFAECRTLIREAVAQSTTNPPPPPPLVSPPVS
LPPATTTASADVDEDVPPPPTPTQKKKAPRTPPPSVLHKPYPPQTIALRR
FILYVMFSISLGDRVGSCMLSSPPSALRS* back to topmRNA from alignment at scaffold_2:716695..719535- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_906 ID=mRNA_906|Name=jgi.p|Nanoce1779_2|536586|organism=Nannochloropsis oceanica|type=mRNA|length=2841bp|location=Sequence derived from alignment at scaffold_2:716695..719535- (Nannochloropsis oceanica)
GCATCACCTCCACCGCATGGCGGCGTACAGGCAATGCCTCCATTCCTCCA
GATCAGAGTCGCATTTACATGCTTTATTCGCACTCTGACGATCCTCTGAT
TATCCTTTCTAATTTTCGAGGACAGTCTTCGTTGCCACTTCAGCTTGGAG
AGGCAGGGAGCGCGCCTCACCCCGCTCGTCAGAACCGCCCATACATCTGG
TGAGCACCAAGCAACCCGCGGTTTCCTCTGCATTTGGGCGGCCTATAAGA
CCCCGCTCGGCAGGCAAACCTTCTGCCATTACACATTCTCAGTCTGTACA
CATGTTTCTCTACACATACAGCCCCTATTGTAGCCACCAAGGCGGAAACG
AGCGCCATCAATCGAGAGAGCCCCATACATAGTACGCCCCCATGGGCATC
ATCCGCCAACCATCCTCCTCGCGGCAGCCTCTGTCCCTGCTACCGCCGCT
GCTATCTCTCATCTTCTCACTCTTGCTCTTCTTGAAAGCTTTCACCACCC
CGGTGGAGGCTTTCACATTGCGCGCTGCGAGTGTGGCGTATCCCATCCGG
GTGGCCTTCCAAGGCGAGCCTGGCGCCTACTCCGAAAAGGCCTTGCGCGA
ACTCTTGGGCCCGCACGTCCTTGCCATTGGCAAGCCGTCGTTCGAAGATA
CTTTCAAGTCCGTCACCACCCGGGAAGTGGACTATGCCGTGGTCCCAATT
GAAAACTCGCTTGGCGGCTCCATACATGCCAACTACGATCTGTTGCTCCG
GCACGAGCTGCACATCATCGGCGAGCACGAATTCCGCGTGGAGCACTCCC
TGCTGGCCCTACCTGGCGTCAAGAGGGATGATATTAAGCGTGTTATGAGT
CACCCGCAGGCCCTGGCGCAGTGTGACGCCTACCTGCGGAACATGGGCGT
TGCGCGAGAATCCATGTACGACACGGCGGGGTCGGCCAAGATAATCGCCG
AGCAGGGCCTGCGGGACTGTGCGGCCATTGCCTCCGAGCTAGCCGGCACA
ACTTATGGTTTGGAGGTACTGGACTCGAACATTGAGGACGACGACAGCAA
CTTTACTCGTTTCCTCCTCCTGTCCCGGCAGTCTATCTCCTCCCTCATCC
CCCACAGCGTCCCGGCTAAGACCTCCATCGTCTTTATCACTCCGGATGCC
CCCGGCGCGCTTTACAAGGCCCTTGCCTGCTTCACCCTCCGGGATATTGA
CTTTTGTAAGATCGAGTCCCGGCCTACCTCCCCGCAGCTCTTCCGCTTCC
TTCAATTCCAGCAGCGGCAGATGAGAAGCTTCGGCGCGGGGAGGGGTGGC
GAGCCGACCACGGGCACTGGCGACGACCACGACTTGCCTCGCTTCCGCTA
TTGCTTCTATCTAGATTTCATGGCTTCCCAGCTAGACGAGCCCGCTCGTA
ACGCCCTATTGCAGCTGGAGGAGCAGTCGCAGTATGTGCGTGTCCTGGGC
TCCTTCCCCACCAAAGGGCAGCTGCTGGGGCCTATCCGGGAATCTTTGGA
CTTGCTGGCCAAGGAGAGCGGGGAGGCCGAAGGCCTGCTTATGCAAAAGG
CCACAAGCATGGCCGCCCGCGGACCCCCACTTAAGGCCCCGGACCGCCTG
AAGATTGGTGTGGTGGGCTTTGGGAAGTTCGGACAGTTCCTGACCAAGAC
TTTCACCAAATTTCACGACGTGAGCGTGGTCAGTCGGGACGACATGACCT
CGGTGGCGGCCGACTTGGGCGTGCCCTTCTTTCCGCTGTATGAGGCTACG
GAGTTTTTCCGACAAGATTTGGATGTGATTGTATTGTCTGTCTCCATTCT
AGCCTTTGAGGAGGTGTTGAAGAGCCTGCCCGCCGACTCCTTGCGAGGCA
AGCTGGTGGTGGACGTGCTGTCGGTGAAGGTGCACCCCAAGACGGTCATG
CTTGAGTCTCTGCCGGGCGATGTGGACATCATCTGCACGCATCCCATGTT
TGGGCCCGAATCAGGCAAGTTTGGGTGGCAGAGCCTGCCCTTCGTTTATG
AGCGGGTGCGTATCCAGGACAATTCTCGGGCGGAGCGCTTTTTGTCGATC
TTTGAGATGGAACGCTGTAAGATGATTGAGATGAGCTGTGACACGCACGA
CAAGTACGCGGCGGATTCCCAGTTTATCACGCACCTGACGGGCCGTATAT
TGGGCCAGCAGGGCCTGCAGCCTACGCCCATCGACACGCGGGGCTTCCAG
AGTGTGCTCAAGCTTGTGGACAACACGTGCCGAGACAGCTTCGACCTTTT
CTACGGCCTCTTCAAGTACAACAAGCACAGCTCCGACCAGATTCAACGCC
TCCGTGAAGCGTTTGCCAACGTCGAGCGCCAGCTGGCTGCCAAAGAGGCT
TATCTCGCCGCGCGCACCGAGATCATGCAGGACGAGCGCAAAAAGCTTTT
CGCTGAATGCCGCACCCTCATCCGGGAGGCCGTTGCCCAGTCGACCACAA
ACCCTCCTCCTCCCCCTCCTTTGGTCTCCCCTCCTGTCTCCCTACCTCCT
GCTACCACCACGGCCTCTGCTGATGTCGATGAGGACGTGCCACCACCACC
AACGCCGACACAAAAGAAAAAAGCACCAAGGACCCCCCCCCCCTCCGTCC
TTCATAAACCCTACCCCCCCCAAACTATAGCTCTGCGTCGATTCATCCTG
TATGTCATGTTTTCAATATCTCTCGGCGATAGGGTAGGGAGCTGCATGCT
TTCGTCCCCACCCAGCGCACTTCGAAGTTGAACCAAAAAGGGAGACACAC
TAGTCTCACCTCGCGCGCGACATTATCAAAGGATAGTGATCAGACGAGAA
GTCAACCAACCAAAGAAAAATAAGAAAAACAACCCAAGAAA back to topCoding sequence (CDS) from alignment at scaffold_2:716695..719535- >mRNA_906 ID=mRNA_906|Name=jgi.p|Nanoce1779_2|536586|organism=Nannochloropsis oceanica|type=CDS|length=2340bp|location=Sequence derived from alignment at scaffold_2:716695..719535- (Nannochloropsis oceanica)
ATGGGCATCATCCGCCAACCATCCTCCTCGCGGCAGCCTCTGTCCCTGCT
ACCGCCGCTGCTATCTCTCATCTTCTCACTCTTGCTCTTCTTGAAAGCTT
TCACCACCCCGGTGGAGGCTTTCACATTGCGCGCTGCGAGTGTGGCGTAT
CCCATCCGGGTGGCCTTCCAAGGCGAGCCTGGCGCCTACTCCGAAAAGGC
CTTGCGCGAACTCTTGGGCCCGCACGTCCTTGCCATTGGCAAGCCGTCGT
TCGAAGATACTTTCAAGTCCGTCACCACCCGGGAAGTGGACTATGCCGTG
GTCCCAATTGAAAACTCGCTTGGCGGCTCCATACATGCCAACTACGATCT
GTTGCTCCGGCACGAGCTGCACATCATCGGCGAGCACGAATTCCGCGTGG
AGCACTCCCTGCTGGCCCTACCTGGCGTCAAGAGGGATGATATTAAGCGT
GTTATGAGTCACCCGCAGGCCCTGGCGCAGTGTGACGCCTACCTGCGGAA
CATGGGCGTTGCGCGAGAATCCATGTACGACACGGCGGGGTCGGCCAAGA
TAATCGCCGAGCAGGGCCTGCGGGACTGTGCGGCCATTGCCTCCGAGCTA
GCCGGCACAACTTATGGTTTGGAGGTACTGGACTCGAACATTGAGGACGA
CGACAGCAACTTTACTCGTTTCCTCCTCCTGTCCCGGCAGTCTATCTCCT
CCCTCATCCCCCACAGCGTCCCGGCTAAGACCTCCATCGTCTTTATCACT
CCGGATGCCCCCGGCGCGCTTTACAAGGCCCTTGCCTGCTTCACCCTCCG
GGATATTGACTTTTGTAAGATCGAGTCCCGGCCTACCTCCCCGCAGCTCT
TCCGCTTCCTTCAATTCCAGCAGCGGCAGATGAGAAGCTTCGGCGCGGGG
AGGGGTGGCGAGCCGACCACGGGCACTGGCGACGACCACGACTTGCCTCG
CTTCCGCTATTGCTTCTATCTAGATTTCATGGCTTCCCAGCTAGACGAGC
CCGCTCGTAACGCCCTATTGCAGCTGGAGGAGCAGTCGCAGTATGTGCGT
GTCCTGGGCTCCTTCCCCACCAAAGGGCAGCTGCTGGGGCCTATCCGGGA
ATCTTTGGACTTGCTGGCCAAGGAGAGCGGGGAGGCCGAAGGCCTGCTTA
TGCAAAAGGCCACAAGCATGGCCGCCCGCGGACCCCCACTTAAGGCCCCG
GACCGCCTGAAGATTGGTGTGGTGGGCTTTGGGAAGTTCGGACAGTTCCT
GACCAAGACTTTCACCAAATTTCACGACGTGAGCGTGGTCAGTCGGGACG
ACATGACCTCGGTGGCGGCCGACTTGGGCGTGCCCTTCTTTCCGCTGTAT
GAGGCTACGGAGTTTTTCCGACAAGATTTGGATGTGATTGTATTGTCTGT
CTCCATTCTAGCCTTTGAGGAGGTGTTGAAGAGCCTGCCCGCCGACTCCT
TGCGAGGCAAGCTGGTGGTGGACGTGCTGTCGGTGAAGGTGCACCCCAAG
ACGGTCATGCTTGAGTCTCTGCCGGGCGATGTGGACATCATCTGCACGCA
TCCCATGTTTGGGCCCGAATCAGGCAAGTTTGGGTGGCAGAGCCTGCCCT
TCGTTTATGAGCGGGTGCGTATCCAGGACAATTCTCGGGCGGAGCGCTTT
TTGTCGATCTTTGAGATGGAACGCTGTAAGATGATTGAGATGAGCTGTGA
CACGCACGACAAGTACGCGGCGGATTCCCAGTTTATCACGCACCTGACGG
GCCGTATATTGGGCCAGCAGGGCCTGCAGCCTACGCCCATCGACACGCGG
GGCTTCCAGAGTGTGCTCAAGCTTGTGGACAACACGTGCCGAGACAGCTT
CGACCTTTTCTACGGCCTCTTCAAGTACAACAAGCACAGCTCCGACCAGA
TTCAACGCCTCCGTGAAGCGTTTGCCAACGTCGAGCGCCAGCTGGCTGCC
AAAGAGGCTTATCTCGCCGCGCGCACCGAGATCATGCAGGACGAGCGCAA
AAAGCTTTTCGCTGAATGCCGCACCCTCATCCGGGAGGCCGTTGCCCAGT
CGACCACAAACCCTCCTCCTCCCCCTCCTTTGGTCTCCCCTCCTGTCTCC
CTACCTCCTGCTACCACCACGGCCTCTGCTGATGTCGATGAGGACGTGCC
ACCACCACCAACGCCGACACAAAAGAAAAAAGCACCAAGGACCCCCCCCC
CCTCCGTCCTTCATAAACCCTACCCCCCCCAAACTATAGCTCTGCGTCGA
TTCATCCTGTATGTCATGTTTTCAATATCTCTCGGCGATAGGGTAGGGAG
CTGCATGCTTTCGTCCCCACCCAGCGCACTTCGAAGTTGA back to top
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