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Properties
Property Name | Value |
TranscriptId | 605127 |
Track | FilteredModels2 |
ProteinId | 605041 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_30 | supercontig | scaffold_30:286945..288433 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9041 ID=mRNA_9041|Name=jgi.p|Nanoce1779_2|605041|organism=Nannochloropsis oceanica|type=mRNA|length=1134bp ACAGACACATACTTCCTCTTCCGTGTCTTGGTATCATCATAGCCACCCAC GGCGCTGCCATGCCCTCTGAGTTTTATCGCGGGGCGTCCAGACATAATGC AGCCACCCTTGTCCTCTTCCTCCTACTCCTGCTCCTGCACTCCTTGGCCT CCTATAGCGCATTTATCCCTGAGTCTTCTGTCCGCATTGGTAAGGCTTTC AATAGGATTATAATTCCTTCTAGTCGTGCAGTTCCCAGAGCTGGCGAGGA TGCTGCCATCGATGTGCCCGCGACTCTGTATGTTGAGGACCCGCCCATCT GGCCTGTGCCAGCCTCGCTTCGACGTGCGGAATCCTTAGGGGGGGGCGAA CCCAGCTATATTAGGTTCTTGGGCTTGGCGAAAGTCTTTGAAGCGCGGGA TGGGGCCAAGTTAGCTGAGCTGTTTGATACTGACAGTTTGTTTAGGCATG CCATCCGAGTAGCAATGCGCGATGACTTATTTGTTCCAGACCCCACTCGT TCAGAGAAGGTAAATCATTTCCTGAAAGACCTTGGCTCCTCCTTGCACGT CAGCTGGGAAAAATCGCCCACCCAATACGCCAATCTGTCCCGGGTCTTCA AAGAATATGGCATTCAGGGGTTGGACGGAGTAACCTTTATCAAGTCTCTT GGTGCCTTGGCGGGTGGTGGCCAGCAATGCGAAGACGCAGACGGATTTCT ACTCCGTGAGCAACGCTTTGGAAGTTTGATTGATATTGTGACTGCTGGGA ACCGCCTCAAGCCCGCTCATTCGTGGCACCAGGACTGCAACCTGCCTCAG ACAACGGTTATGTTGGGTTTTCCCAAGAGTAATGAGTACAAGGGCGCGGG CGTCTTTTCCCACGCCATCAAGATATCTCACCAAATAAGGGATCAGGTAC CAGGGGGCGGGGCGGTTGTCCAATACGATGAGTTCGAAGGAGTTGGACAG AGCGACGACCTGCCGAACCCTTTGCCAGAATCCGTTATTCTGCGACCCTG GTACGCGAAAGGTCGCGAAATTATGGTTTATGATGACAGTTGGCACATTC ACTCGGCGCCAGACCATATCCATCGGGCGTCGATTTGGCGCTTTATGTGA TTTGTAAAATGGAAGGAATAGCGGAAGGATTTAA back to topprotein sequence of jgi.p|Nanoce1779_2|605041 >mRNA_9041-protein ID=mRNA_9041-protein|Name=jgi.p|Nanoce1779_2|605041|organism=Nannochloropsis oceanica|type=polypeptide|length=347bp MPSEFYRGASRHNAATLVLFLLLLLLHSLASYSAFIPESSVRIGKAFNRI IIPSSRAVPRAGEDAAIDVPATLYVEDPPIWPVPASLRRAESLGGGEPSY IRFLGLAKVFEARDGAKLAELFDTDSLFRHAIRVAMRDDLFVPDPTRSEK VNHFLKDLGSSLHVSWEKSPTQYANLSRVFKEYGIQGLDGVTFIKSLGAL AGGGQQCEDADGFLLREQRFGSLIDIVTAGNRLKPAHSWHQDCNLPQTTV MLGFPKSNEYKGAGVFSHAIKISHQIRDQVPGGGAVVQYDEFEGVGQSDD LPNPLPESVILRPWYAKGREIMVYDDSWHIHSAPDHIHRASIWRFM* back to topmRNA from alignment at scaffold_30:286945..288433+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9041 ID=mRNA_9041|Name=jgi.p|Nanoce1779_2|605041|organism=Nannochloropsis oceanica|type=mRNA|length=1489bp|location=Sequence derived from alignment at scaffold_30:286945..288433+ (Nannochloropsis oceanica) ACAGACACATACTTCCTCTTCCGTGTCTTGGTATCATCATAGCCACCCAC
GGCGCTGCCATGCCCTCTGAGTTTTATCGCGGGGCGTCCAGACATAATGC
AGCCACCCTTGTCCTCTTCCTCCTACTCCTGCTCCTGCACTCCTTGGCCT
CCTATAGCGCATTTATCCCTGAGTCTTCTGTCCGCATTGGTAAGGCTTTC
AATAGGATTATAATTCCTTCTAGTCGTGCAGTTCCCAGAGCTGGCGAGGA
TGCTGCCATCGATGTGCCCGCGACTCTGTATGTTGAGGACCCGCCCATCT
GGCCTGTGCCAGCCTCGCTTCGACGTGCGGAATCCTTAGGGGGGGGCGAA
CCCAGCTATATTAGGTTCTTGGGCTTGGCGAAAGTCTTTGAAGCGCGGGA
TGGGGCCAAGTTAGCTGAGCTGTTTGATACTGACAGTTTGTTTAGGTGCG
TGGCATTCTTTGCTTCCCTTCCCATCCCTTCCTTCCTCCTATGTCCCCCC
TAACCATTTATATTTTTTTCCTCAGGCATGCCATCCGAGTAGCAATGCGC
GATGACTTATTTGTTCCAGACCCCACTCGTTCAGAGAAGGTAAATCATTT
CCTGAAAGACCTTGGCTCCTCCTTGCACGTCAGCTGGGAAAAATCGCCCA
CCCAATACGCCAATCTGTCCCGGTAAGTTCCAGATGAGCGAAATTTAAGT
GAATTCGTACAGTGTGCCGACGTATTCAGCGTTGGTTAGTCCCTTTTCTA
ACTTCTCTTTTTTCAGGTCGACTCGAATGGGAGCCCCCGTCCGGCGCAGA
TATACACGTATCCACGCTATCTTTCTTGCGCCATCCTTCTCCTTTCCACC
CACCCTCCCTCCCTCCCTCTCCCCCTTCTTTCGCAATGGATACAATCGAT
GTTATACTTATGAAAGATATGCATGAAAACCTACCAAAAAATACAAGGGT
CTTCAAAGAATATGGCATTCAGGGGTTGGACGGAGTAACCTTTATCAAGT
CTCTTGGTGCCTTGGCGGGTGGTGGCCAGCAATGCGAAGACGCAGACGGA
TTTCTACTCCGTGAGCAACGCTTTGGAAGTTTGATTGATATTGTGACTGC
TGGGAACCGCCTCAAGCCCGCTCATTCGTGGCACCAGGACTGCAACCTGC
CTCAGACAACGGTTATGTTGGGTTTTCCCAAGAGTAATGAGTACAAGGGC
GCGGGCGTCTTTTCCCACGCCATCAAGATATCTCACCAAATAAGGGATCA
GGTACCAGGGGGCGGGGCGGTTGTCCAATACGATGAGTTCGAAGGAGTTG
GACAGAGCGACGACCTGCCGAACCCTTTGCCAGAATCCGTTATTCTGCGA
CCCTGGTACGCGAAAGGTCGCGAAATTATGGTTTATGATGACAGTTGGCA
CATTCACTCGGCGCCAGACCATATCCATCGGGCGTCGATTTGGCGCTTTA
TGTGATTTGTAAAATGGAAGGAATAGCGGAAGGATTTAA back to topCoding sequence (CDS) from alignment at scaffold_30:286945..288433+ >mRNA_9041 ID=mRNA_9041|Name=jgi.p|Nanoce1779_2|605041|organism=Nannochloropsis oceanica|type=CDS|length=3123bp|location=Sequence derived from alignment at scaffold_30:286945..288433+ (Nannochloropsis oceanica) ATGCCCTCTGAGTTTTATCGCGGGGCGTCCAGACATAATGCAGCCACCCT TGTCCTCTTCCTCCTACTCCTGCTCCTGCACTCCTTGGCCTCCTATAGCG CATTTATCCCTGAGTCTTCTGTCCGCATTGGTAAGGCTTTCAATAGGATT ATAATTCCTTCTAGTCGTGCAGTTCCCAGAGCTGGCGAGGATGCTGCCAT CGATGTGCCCGCGACTCTGTATGTTGAGGACCCGCCCATCTGGCCTGTGC CAGCCTCGCTTCGACGTGCGGAATCCTTAGGGGGGGGCGAACCCAGCTAT ATTAGGTTCTTGGGCTTGGCGAAAGTCTTTGAAGCGCGGGATGGGGCCAA GTTAGCTGAGCTGTTTGATACTGACAGTTTGTTTAGGCATGCCATCCGAG TAGCAATGCGCGATGACTTATTTGTTCCAGACCCCACTCGTTCAGAGAAG GTAAATCATTTCCTGAAAGACCTTGGCTCCTCCTTGCACGTCAGCTGGGA AAAATCGCCCACCCAATACGCCAATCTGTCCCGGGTCTTCAAAGAATATG GCATTCAGGGGTTGGACGGAGTAACCTTTATCAAGTCTCTTGGTGCCTTG GCGGGTGGTGGCCAGCAATGCGAAGACGCAGACGGATTTCTACTCCGTGA GCAACGCTTTGGAAGTTTGATTGATATTGTGACTGCTGGGAACCGCCTCA AGCCCGCTCATTCGTGGCACCAGGACTGCAACCTGCCTCAGACAACGGTT ATGTTGGGTTTTCCCAAGAGTAATGAGTACAAGGGCGCGGGCGTCTTTTC CCACGCCATCAAGATATCTCACCAAATAAGGGATCAGGTACCAGGGGGCG GGGCGGTTGTCCAATACGATGAGTTCGAAGGAGTTGGACAGAGCGACGAC CTGCCGAACCCTTTGCCAGAATCCGTTATTCTGCGACCCTGGTACGCGAA AGGTCGCGAAATTATGGTTTATGATGACAGTTGGCACATTCACTCGGCGC CAGACCATATCCATCGGGCGTCGATTTGGCGCTTTATGTGAATGCCCTCT GAGTTTTATCGCGGGGCGTCCAGACATAATGCAGCCACCCTTGTCCTCTT CCTCCTACTCCTGCTCCTGCACTCCTTGGCCTCCTATAGCGCATTTATCC CTGAGTCTTCTGTCCGCATTGGTAAGGCTTTCAATAGGATTATAATTCCT TCTAGTCGTGCAGTTCCCAGAGCTGGCGAGGATGCTGCCATCGATGTGCC CGCGACTCTGTATGTTGAGGACCCGCCCATCTGGCCTGTGCCAGCCTCGC TTCGACGTGCGGAATCCTTAGGGGGGGGCGAACCCAGCTATATTAGGTTC TTGGGCTTGGCGAAAGTCTTTGAAGCGCGGGATGGGGCCAAGTTAGCTGA GCTGTTTGATACTGACAGTTTGTTTAGGCATGCCATCCGAGTAGCAATGC GCGATGACTTATTTGTTCCAGACCCCACTCGTTCAGAGAAGGTAAATCAT TTCCTGAAAGACCTTGGCTCCTCCTTGCACGTCAGCTGGGAAAAATCGCC CACCCAATACGCCAATCTGTCCCGGGTCTTCAAAGAATATGGCATTCAGG GGTTGGACGGAGTAACCTTTATCAAGTCTCTTGGTGCCTTGGCGGGTGGT GGCCAGCAATGCGAAGACGCAGACGGATTTCTACTCCGTGAGCAACGCTT TGGAAGTTTGATTGATATTGTGACTGCTGGGAACCGCCTCAAGCCCGCTC ATTCGTGGCACCAGGACTGCAACCTGCCTCAGACAACGGTTATGTTGGGT TTTCCCAAGAGTAATGAGTACAAGGGCGCGGGCGTCTTTTCCCACGCCAT CAAGATATCTCACCAAATAAGGGATCAGGTACCAGGGGGCGGGGCGGTTG TCCAATACGATGAGTTCGAAGGAGTTGGACAGAGCGACGACCTGCCGAAC CCTTTGCCAGAATCCGTTATTCTGCGACCCTGGTACGCGAAAGGTCGCGA AATTATGGTTTATGATGACAGTTGGCACATTCACTCGGCGCCAGACCATA TCCATCGGGCGTCGATTTGGCGCTTTATGTGAATGCCCTCTGAGTTTTAT CGCGGGGCGTCCAGACATAATGCAGCCACCCTTGTCCTCTTCCTCCTACT CCTGCTCCTGCACTCCTTGGCCTCCTATAGCGCATTTATCCCTGAGTCTT CTGTCCGCATTGGTAAGGCTTTCAATAGGATTATAATTCCTTCTAGTCGT GCAGTTCCCAGAGCTGGCGAGGATGCTGCCATCGATGTGCCCGCGACTCT GTATGTTGAGGACCCGCCCATCTGGCCTGTGCCAGCCTCGCTTCGACGTG CGGAATCCTTAGGGGGGGGCGAACCCAGCTATATTAGGTTCTTGGGCTTG GCGAAAGTCTTTGAAGCGCGGGATGGGGCCAAGTTAGCTGAGCTGTTTGA TACTGACAGTTTGTTTAGGCATGCCATCCGAGTAGCAATGCGCGATGACT TATTTGTTCCAGACCCCACTCGTTCAGAGAAGGTAAATCATTTCCTGAAA GACCTTGGCTCCTCCTTGCACGTCAGCTGGGAAAAATCGCCCACCCAATA CGCCAATCTGTCCCGGGTCTTCAAAGAATATGGCATTCAGGGGTTGGACG GAGTAACCTTTATCAAGTCTCTTGGTGCCTTGGCGGGTGGTGGCCAGCAA TGCGAAGACGCAGACGGATTTCTACTCCGTGAGCAACGCTTTGGAAGTTT GATTGATATTGTGACTGCTGGGAACCGCCTCAAGCCCGCTCATTCGTGGC ACCAGGACTGCAACCTGCCTCAGACAACGGTTATGTTGGGTTTTCCCAAG AGTAATGAGTACAAGGGCGCGGGCGTCTTTTCCCACGCCATCAAGATATC TCACCAAATAAGGGATCAGGTACCAGGGGGCGGGGCGGTTGTCCAATACG ATGAGTTCGAAGGAGTTGGACAGAGCGACGACCTGCCGAACCCTTTGCCA GAATCCGTTATTCTGCGACCCTGGTACGCGAAAGGTCGCGAAATTATGGT TTATGATGACAGTTGGCACATTCACTCGGCGCCAGACCATATCCATCGGG CGTCGATTTGGCGCTTTATGTGA back to top
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