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Properties
Property Name | Value |
TranscriptId | 250503 |
Track | FilteredModels2 |
ProteinId | 250417 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_30 | supercontig | scaffold_30:256385..258686 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9034 ID=mRNA_9034|Name=jgi.p|Nanoce1779_2|250417|organism=Nannochloropsis oceanica|type=mRNA|length=1959bp CTTCTCGTCTCGGAACTCCATCGTCATCTCGTCATCCACCACCCACAACA TAAAACACCACAGAGAGAGCGTTGCACGCCAGCCGCAACAGTAGCAGCAT GACCAATTCTACTGAAGCCACGGAGGTCTCCCCTCCGGCCGCCGAGGCTG CGGAGGAGAGCAAGCCCAAGGCTCCCAAGGCCCTCCCCGCCGGCCCCCGC CCCGACAAGCGCAATCTCGACAAGGCCGTAGGTGCCCTGCAAGCCGAGAT CGACAAGCTGAACGAGAACATTGCGGGGTATGATAAAAAGATGGAGGAAA TCAAGAAGAAGATTGACGTGGCCATGGCCGCACGGTCTGGAGAACAGGAC GAGTTATCCAAGGAAAGGGCGAAACGTGACGCCATCAAGGCGGAGCTCGA CAAGATCAAGGCGGAGAAGGACACCCTCTCGGCTGAGTTCGACCGAGTCA AGGGGAAGGTGGACACGGCCATCGACGCAAGCAAGAACGCGAAGCAAAGC TTGAAGTTTCGATCTGTCGAGGAGATTGACGCGGAGATGAGCCGCCTGAA CAAGCTTCAGAGCACCACGTCCATGACTTTGGGCGAGGAGAAGAAGCTGG TCAAGGAGCTGGAGAGCCTCCGCGGGCAGAAGCGACAGCTGTCTGCGTTA GGGGCGTCGGAGGGACAGATCAAGAACGATAAGGACGAAAGGGCGCGGAT CCAGGGGCTGTTGAAGGCGAAAAGAGACGCCTTCACCGAGTGCCTGGGGC GGCTGACTGCGCAGAGGGAGGTGTGTGATGCGGTGCAGGCGAAGGAGAAT GGCGGCGAGGGGGGAAAGAAGGGTCTAATCCCCACATTACATGATGAAAG GAACGTATTCTGGAAAAAGAAGTCGGAGGCTATCACCCAGATCAAGGCGA TTCGTGAGCAGGTTAAGGGAAAGTGGGATGAGTTCAAGGCGGCGAGGAAG GAGTGGGAGGCGTTCATGGATGAGGAGAGGAAGGTGAGGGAAGCGGAGCG GAAAGCCCAGAAGGAGGAATGGGAGAGGAAGCGAGAGGAGGAGGAGGCCA AGAAAATTCCGTTTGAGGAGGAAATGGCTCTGTGCGACTACCTATCAAAT TACTTGAAGACTACCTTTTTAGTCGAGAAGGAGACAGCCACCGCGGCGGT TGCAGCAGCTGCGGTGGCGGCGGCGGCGGGGCCGGCGGCGGCTTTTGAGC ATGATGGGATGACATTACAGGCTTTCAGGAGAGAGGATGAGGAGGAGGAG CGGTGGGTGGGGGGCGGGAAGAAGAAGAAGGAGAAGAAGCCTGAGGGGGG GAAGAAGAAAAACAGCTCCTTGACACACTCTCCGGAGCTGCTGGCGTCGT TTGCGCTTCTGAAACTTGACGCACCGAGTAAGAAGGACGGGGTTGAGGCG GCGGTGGTGGCACTGAAGGAGAAGAAAGAGTGGTTCTCAGTCCAGCCCCG CCCGATCAAGAAGAAGGCGGAGCCCAAGGAAAAGGAGGAAGGGGAGGAGG GCATGGGGGAAAACGGAGAGGCGGATCCGGTTGCTGGGGAGGAGGGTGGA AATGCCGGAAACAGTAAGGGAGGGAAGGGAAAGGGGGGGAGAGGTGGGGA GAAGAAGGCGGCGACTAAGGAATTTAAACGATCGGATGACGATTTCCCCA CGTTGGGCGCTACGGTGGCGGCCCCAGCGGCTAAAGCCGAGGCGTAAAAA GGGGAGAGAGATATTTTAAAATAGTTGGAGGGAACGAACGAGTGAAGATA ATTTGGCTTGTCACGCATGCATGCGATAAGGTGGTAAGATCGATCGGGAA AGGAGACAGGGAATGGATGGTAGCAAGGCTTTGAGTGAGGTAACAAATGA TGAAGAAAGAAAGGAGGGATTTATAGGTAGAGCACAAATCGAGACGTCAG ATAGGGTGGAGGAAGAAATTGCGCGCGTGTGATAGTGAGAGAGTGAAATA CACAGGCAA back to topprotein sequence of jgi.p|Nanoce1779_2|250417 >mRNA_9034-protein ID=mRNA_9034-protein|Name=jgi.p|Nanoce1779_2|250417|organism=Nannochloropsis oceanica|type=polypeptide|length=533bp MTNSTEATEVSPPAAEAAEESKPKAPKALPAGPRPDKRNLDKAVGALQAE IDKLNENIAGYDKKMEEIKKKIDVAMAARSGEQDELSKERAKRDAIKAEL DKIKAEKDTLSAEFDRVKGKVDTAIDASKNAKQSLKFRSVEEIDAEMSRL NKLQSTTSMTLGEEKKLVKELESLRGQKRQLSALGASEGQIKNDKDERAR IQGLLKAKRDAFTECLGRLTAQREVCDAVQAKENGGEGGKKGLIPTLHDE RNVFWKKKSEAITQIKAIREQVKGKWDEFKAARKEWEAFMDEERKVREAE RKAQKEEWERKREEEEAKKIPFEEEMALCDYLSNYLKTTFLVEKETATAA VAAAAVAAAAGPAAAFEHDGMTLQAFRREDEEEERWVGGGKKKKEKKPEG GKKKNSSLTHSPELLASFALLKLDAPSKKDGVEAAVVALKEKKEWFSVQP RPIKKKAEPKEKEEGEEGMGENGEADPVAGEEGGNAGNSKGGKGKGGRGG EKKAATKEFKRSDDDFPTLGATVAAPAAKAEA* back to topmRNA from alignment at scaffold_30:256385..258686+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9034 ID=mRNA_9034|Name=jgi.p|Nanoce1779_2|250417|organism=Nannochloropsis oceanica|type=mRNA|length=2302bp|location=Sequence derived from alignment at scaffold_30:256385..258686+ (Nannochloropsis oceanica) CTTCTCGTCTCGGAACTCCATCGTCATCTCGTCATCCACCACCCACAACA
TAAAACACCACAGAGAGAGCGTTGCACGCCAGCCGCAACAGTAGCAGCAT
GACCAATTCTACTGAAGCCACGGAGGTCTCCCCTCCGGCCGCCGAGGCTG
CGGAGGAGAGCAAGCCCAAGGTATGTATATGTGACCGCGTGTTGAGAGCC
CCGCTTCTTCCACACCGCTCCTTCGATTCCATTCCAATCAGCAAATGTCT
CCTTATTCTTGTGCGTCAATGCCACAGTATTTCTCCTTGCTATCAACTAC
CTGACAATGCTTCAAGTTCTTGCCTCCTCTATCTCACCCTCCCTCCACCC
GTCCATCCCTCCCTGCCTCCACCTCTTCATCAGGCTCCCAAGGCCCTCCC
CGCCGGCCCCCGCCCCGACAAGCGCAATCTCGACAAGGCCGTAGGTGCCC
TGCAAGCCGAGATCGACAAGCTGAACGAGAACATTGCGGGGTATGATAAA
AAGATGGAGGAAATCAAGAAGAAGATTGACGTGGCCATGGCCGCACGGTC
TGGAGAACAGGACGAGTTATCCAAGGAAAGGGCGAAACGTGACGCCATCA
AGGCGGAGCTCGACAAGATCAAGGCGGAGAAGGTTAGTGAGCAATAAAGA
AATTAGCAGAGGAGAGGTGCAACATGTCGATCTCGAAAGCATCCCACAGT
ACAGTGTTGCCTACCTTTTTCCCCGTTCGTTCCTTCCCCGCCCTCCCTTC
CTCCTTCTCCAGGACACCCTCTCGGCTGAGTTCGACCGAGTCAAGGGGAA
GGTGGACACGGCCATCGACGCAAGCAAGAACGCGAAGCAAAGCTTGAAGT
TTCGATCTGTCGAGGAGATTGACGCGGAGATGAGCCGCCTGAACAAGCTT
CAGAGCACCACGTCCATGACTTTGGGCGAGGAGAAGAAGCTGGTCAAGGA
GCTGGAGAGCCTCCGCGGGCAGAAGCGACAGCTGTCTGCGTTAGGGGCGT
CGGAGGGACAGATCAAGAACGATAAGGACGAAAGGGCGCGGATCCAGGGG
CTGTTGAAGGCGAAAAGAGACGCCTTCACCGAGTGCCTGGGGCGGCTGAC
TGCGCAGAGGGAGGTGTGTGATGCGGTGCAGGCGAAGGAGAATGGCGGCG
AGGGGGGAAAGAAGGGTCTAATCCCCACATTACATGATGAAAGGAACGTA
TTCTGGAAAAAGAAGTCGGAGGCTATCACCCAGATCAAGGCGATTCGTGA
GCAGGTTAAGGGAAAGTGGGATGAGTTCAAGGCGGCGAGGAAGGAGTGGG
AGGCGTTCATGGATGAGGAGAGGAAGGTGAGGGAAGCGGAGCGGAAAGCC
CAGAAGGAGGAATGGGAGAGGAAGCGAGAGGAGGAGGAGGCCAAGAAAAT
TCCGTTTGAGGAGGAAATGGCTCTGTGCGACTACCTATCAAATTACTTGA
AGACTACCTTTTTAGTCGAGAAGGAGACAGCCACCGCGGCGGTTGCAGCA
GCTGCGGTGGCGGCGGCGGCGGGGCCGGCGGCGGCTTTTGAGCATGATGG
GATGACATTACAGGCTTTCAGGAGAGAGGATGAGGAGGAGGAGCGGTGGG
TGGGGGGCGGGAAGAAGAAGAAGGAGAAGAAGCCTGAGGGGGGGAAGAAG
AAAAACAGCTCCTTGACACACTCTCCGGAGCTGCTGGCGTCGTTTGCGCT
TCTGAAACTTGACGCACCGAGTAAGAAGGACGGGGTTGAGGCGGCGGTGG
TGGCACTGAAGGAGAAGAAAGAGTGGTTCTCAGTCCAGCCCCGCCCGATC
AAGAAGAAGGCGGAGCCCAAGGAAAAGGAGGAAGGGGAGGAGGGCATGGG
GGAAAACGGAGAGGCGGATCCGGTTGCTGGGGAGGAGGGTGGAAATGCCG
GAAACAGTAAGGGAGGGAAGGGAAAGGGGGGGAGAGGTGGGGAGAAGAAG
GCGGCGACTAAGGAATTTAAACGATCGGATGACGATTTCCCCACGTTGGG
CGCTACGGTGGCGGCCCCAGCGGCTAAAGCCGAGGCGTAAAAAGGGGAGA
GAGATATTTTAAAATAGTTGGAGGGAACGAACGAGTGAAGATAATTTGGC
TTGTCACGCATGCATGCGATAAGGTGGTAAGATCGATCGGGAAAGGAGAC
AGGGAATGGATGGTAGCAAGGCTTTGAGTGAGGTAACAAATGATGAAGAA
AGAAAGGAGGGATTTATAGGTAGAGCACAAATCGAGACGTCAGATAGGGT
GGAGGAAGAAATTGCGCGCGTGTGATAGTGAGAGAGTGAAATACACAGGC
AA back to topCoding sequence (CDS) from alignment at scaffold_30:256385..258686+ >mRNA_9034 ID=mRNA_9034|Name=jgi.p|Nanoce1779_2|250417|organism=Nannochloropsis oceanica|type=CDS|length=4797bp|location=Sequence derived from alignment at scaffold_30:256385..258686+ (Nannochloropsis oceanica) ATGACCAATTCTACTGAAGCCACGGAGGTCTCCCCTCCGGCCGCCGAGGC TGCGGAGGAGAGCAAGCCCAAGGCTCCCAAGGCCCTCCCCGCCGGCCCCC GCCCCGACAAGCGCAATCTCGACAAGGCCGTAGGTGCCCTGCAAGCCGAG ATCGACAAGCTGAACGAGAACATTGCGGGGTATGATAAAAAGATGGAGGA AATCAAGAAGAAGATTGACGTGGCCATGGCCGCACGGTCTGGAGAACAGG ACGAGTTATCCAAGGAAAGGGCGAAACGTGACGCCATCAAGGCGGAGCTC GACAAGATCAAGGCGGAGAAGGACACCCTCTCGGCTGAGTTCGACCGAGT CAAGGGGAAGGTGGACACGGCCATCGACGCAAGCAAGAACGCGAAGCAAA GCTTGAAGTTTCGATCTGTCGAGGAGATTGACGCGGAGATGAGCCGCCTG AACAAGCTTCAGAGCACCACGTCCATGACTTTGGGCGAGGAGAAGAAGCT GGTCAAGGAGCTGGAGAGCCTCCGCGGGCAGAAGCGACAGCTGTCTGCGT TAGGGGCGTCGGAGGGACAGATCAAGAACGATAAGGACGAAAGGGCGCGG ATCCAGGGGCTGTTGAAGGCGAAAAGAGACGCCTTCACCGAGTGCCTGGG GCGGCTGACTGCGCAGAGGGAGGTGTGTGATGCGGTGCAGGCGAAGGAGA ATGGCGGCGAGGGGGGAAAGAAGGGTCTAATCCCCACATTACATGATGAA AGGAACGTATTCTGGAAAAAGAAGTCGGAGGCTATCACCCAGATCAAGGC GATTCGTGAGCAGGTTAAGGGAAAGTGGGATGAGTTCAAGGCGGCGAGGA AGGAGTGGGAGGCGTTCATGGATGAGGAGAGGAAGGTGAGGGAAGCGGAG CGGAAAGCCCAGAAGGAGGAATGGGAGAGGAAGCGAGAGGAGGAGGAGGC CAAGAAAATTCCGTTTGAGGAGGAAATGGCTCTGTGCGACTACCTATCAA ATTACTTGAAGACTACCTTTTTAGTCGAGAAGGAGACAGCCACCGCGGCG GTTGCAGCAGCTGCGGTGGCGGCGGCGGCGGGGCCGGCGGCGGCTTTTGA GCATGATGGGATGACATTACAGGCTTTCAGGAGAGAGGATGAGGAGGAGG AGCGGTGGGTGGGGGGCGGGAAGAAGAAGAAGGAGAAGAAGCCTGAGGGG GGGAAGAAGAAAAACAGCTCCTTGACACACTCTCCGGAGCTGCTGGCGTC GTTTGCGCTTCTGAAACTTGACGCACCGAGTAAGAAGGACGGGGTTGAGG CGGCGGTGGTGGCACTGAAGGAGAAGAAAGAGTGGTTCTCAGTCCAGCCC CGCCCGATCAAGAAGAAGGCGGAGCCCAAGGAAAAGGAGGAAGGGGAGGA GGGCATGGGGGAAAACGGAGAGGCGGATCCGGTTGCTGGGGAGGAGGGTG GAAATGCCGGAAACAGTAAGGGAGGGAAGGGAAAGGGGGGGAGAGGTGGG GAGAAGAAGGCGGCGACTAAGGAATTTAAACGATCGGATGACGATTTCCC CACGTTGGGCGCTACGGTGGCGGCCCCAGCGGCTAAAGCCGAGGCGTAAA TGACCAATTCTACTGAAGCCACGGAGGTCTCCCCTCCGGCCGCCGAGGCT GCGGAGGAGAGCAAGCCCAAGGCTCCCAAGGCCCTCCCCGCCGGCCCCCG CCCCGACAAGCGCAATCTCGACAAGGCCGTAGGTGCCCTGCAAGCCGAGA TCGACAAGCTGAACGAGAACATTGCGGGGTATGATAAAAAGATGGAGGAA ATCAAGAAGAAGATTGACGTGGCCATGGCCGCACGGTCTGGAGAACAGGA CGAGTTATCCAAGGAAAGGGCGAAACGTGACGCCATCAAGGCGGAGCTCG ACAAGATCAAGGCGGAGAAGGACACCCTCTCGGCTGAGTTCGACCGAGTC AAGGGGAAGGTGGACACGGCCATCGACGCAAGCAAGAACGCGAAGCAAAG CTTGAAGTTTCGATCTGTCGAGGAGATTGACGCGGAGATGAGCCGCCTGA ACAAGCTTCAGAGCACCACGTCCATGACTTTGGGCGAGGAGAAGAAGCTG GTCAAGGAGCTGGAGAGCCTCCGCGGGCAGAAGCGACAGCTGTCTGCGTT AGGGGCGTCGGAGGGACAGATCAAGAACGATAAGGACGAAAGGGCGCGGA TCCAGGGGCTGTTGAAGGCGAAAAGAGACGCCTTCACCGAGTGCCTGGGG CGGCTGACTGCGCAGAGGGAGGTGTGTGATGCGGTGCAGGCGAAGGAGAA TGGCGGCGAGGGGGGAAAGAAGGGTCTAATCCCCACATTACATGATGAAA GGAACGTATTCTGGAAAAAGAAGTCGGAGGCTATCACCCAGATCAAGGCG ATTCGTGAGCAGGTTAAGGGAAAGTGGGATGAGTTCAAGGCGGCGAGGAA GGAGTGGGAGGCGTTCATGGATGAGGAGAGGAAGGTGAGGGAAGCGGAGC GGAAAGCCCAGAAGGAGGAATGGGAGAGGAAGCGAGAGGAGGAGGAGGCC AAGAAAATTCCGTTTGAGGAGGAAATGGCTCTGTGCGACTACCTATCAAA TTACTTGAAGACTACCTTTTTAGTCGAGAAGGAGACAGCCACCGCGGCGG TTGCAGCAGCTGCGGTGGCGGCGGCGGCGGGGCCGGCGGCGGCTTTTGAG CATGATGGGATGACATTACAGGCTTTCAGGAGAGAGGATGAGGAGGAGGA GCGGTGGGTGGGGGGCGGGAAGAAGAAGAAGGAGAAGAAGCCTGAGGGGG GGAAGAAGAAAAACAGCTCCTTGACACACTCTCCGGAGCTGCTGGCGTCG TTTGCGCTTCTGAAACTTGACGCACCGAGTAAGAAGGACGGGGTTGAGGC GGCGGTGGTGGCACTGAAGGAGAAGAAAGAGTGGTTCTCAGTCCAGCCCC GCCCGATCAAGAAGAAGGCGGAGCCCAAGGAAAAGGAGGAAGGGGAGGAG GGCATGGGGGAAAACGGAGAGGCGGATCCGGTTGCTGGGGAGGAGGGTGG AAATGCCGGAAACAGTAAGGGAGGGAAGGGAAAGGGGGGGAGAGGTGGGG AGAAGAAGGCGGCGACTAAGGAATTTAAACGATCGGATGACGATTTCCCC ACGTTGGGCGCTACGGTGGCGGCCCCAGCGGCTAAAGCCGAGGCGTAAAT GACCAATTCTACTGAAGCCACGGAGGTCTCCCCTCCGGCCGCCGAGGCTG CGGAGGAGAGCAAGCCCAAGGCTCCCAAGGCCCTCCCCGCCGGCCCCCGC CCCGACAAGCGCAATCTCGACAAGGCCGTAGGTGCCCTGCAAGCCGAGAT CGACAAGCTGAACGAGAACATTGCGGGGTATGATAAAAAGATGGAGGAAA TCAAGAAGAAGATTGACGTGGCCATGGCCGCACGGTCTGGAGAACAGGAC GAGTTATCCAAGGAAAGGGCGAAACGTGACGCCATCAAGGCGGAGCTCGA CAAGATCAAGGCGGAGAAGGACACCCTCTCGGCTGAGTTCGACCGAGTCA AGGGGAAGGTGGACACGGCCATCGACGCAAGCAAGAACGCGAAGCAAAGC TTGAAGTTTCGATCTGTCGAGGAGATTGACGCGGAGATGAGCCGCCTGAA CAAGCTTCAGAGCACCACGTCCATGACTTTGGGCGAGGAGAAGAAGCTGG TCAAGGAGCTGGAGAGCCTCCGCGGGCAGAAGCGACAGCTGTCTGCGTTA GGGGCGTCGGAGGGACAGATCAAGAACGATAAGGACGAAAGGGCGCGGAT CCAGGGGCTGTTGAAGGCGAAAAGAGACGCCTTCACCGAGTGCCTGGGGC GGCTGACTGCGCAGAGGGAGGTGTGTGATGCGGTGCAGGCGAAGGAGAAT GGCGGCGAGGGGGGAAAGAAGGGTCTAATCCCCACATTACATGATGAAAG GAACGTATTCTGGAAAAAGAAGTCGGAGGCTATCACCCAGATCAAGGCGA TTCGTGAGCAGGTTAAGGGAAAGTGGGATGAGTTCAAGGCGGCGAGGAAG GAGTGGGAGGCGTTCATGGATGAGGAGAGGAAGGTGAGGGAAGCGGAGCG GAAAGCCCAGAAGGAGGAATGGGAGAGGAAGCGAGAGGAGGAGGAGGCCA AGAAAATTCCGTTTGAGGAGGAAATGGCTCTGTGCGACTACCTATCAAAT TACTTGAAGACTACCTTTTTAGTCGAGAAGGAGACAGCCACCGCGGCGGT TGCAGCAGCTGCGGTGGCGGCGGCGGCGGGGCCGGCGGCGGCTTTTGAGC ATGATGGGATGACATTACAGGCTTTCAGGAGAGAGGATGAGGAGGAGGAG CGGTGGGTGGGGGGCGGGAAGAAGAAGAAGGAGAAGAAGCCTGAGGGGGG GAAGAAGAAAAACAGCTCCTTGACACACTCTCCGGAGCTGCTGGCGTCGT TTGCGCTTCTGAAACTTGACGCACCGAGTAAGAAGGACGGGGTTGAGGCG GCGGTGGTGGCACTGAAGGAGAAGAAAGAGTGGTTCTCAGTCCAGCCCCG CCCGATCAAGAAGAAGGCGGAGCCCAAGGAAAAGGAGGAAGGGGAGGAGG GCATGGGGGAAAACGGAGAGGCGGATCCGGTTGCTGGGGAGGAGGGTGGA AATGCCGGAAACAGTAAGGGAGGGAAGGGAAAGGGGGGGAGAGGTGGGGA GAAGAAGGCGGCGACTAAGGAATTTAAACGATCGGATGACGATTTCCCCA CGTTGGGCGCTACGGTGGCGGCCCCAGCGGCTAAAGCCGAGGCGTAA back to top
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