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Properties
| Property Name | Value |
|---|
| TranscriptId | 605009 |
| Track | FilteredModels2 |
| ProteinId | 604923 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_30 | supercontig | scaffold_30:221096..224511 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9019 ID=mRNA_9019|Name=jgi.p|Nanoce1779_2|604923|organism=Nannochloropsis oceanica|type=mRNA|length=2530bp
AGGCACCCGCACCTGCTGCCCCAGCGAGCTGATTCAACACGCTTGGAAAG
GAACAACACAATGGATGACGACGCCCCACCATCATCATCGGGACGATGCT
CATCAGCAGCCCAAGGAGCCTCCTCTTCCTCCTCCACAACGACCACCATC
AGCACCACGACCACTTCCTCTACCTCTAATTGGATTGGTGCTGGTGGCCG
CAATTTTCCGGACCTCTCCGACCCCCCAAGTCAAGATGGAAAATCGTGCA
CCCCTTCAACTTCCTCCTCACCCTCCCCTCCCTTCTTCTTCGCCACCCTT
GCCGATACCCAACTCGGCGCCATAAACGACAACACCAGCTGGGAGGACGA
AAAACAGCTATGTCGTCTCGCCGTCCAAAAGCTGAACCAATTGAAGCCAA
GGCCACGCTTTGCCATAGTATGTGGTGATTTAGTGCATCACTTTCCAGGC
ATGTATCCCGACACCGACCCCAGTATCCGAGAAAGGCAAATAGCTGATTT
CAAGGCCATCATGGGCGAGATACACCCTGCCATCCCTCTCCTCTGCGTGT
GCGGAAACCACGACGTAGGCAATCGTCCCACAGCTTCTTCTATAGAGGCA
TTTAAAAAAGATTTCGGTGATGATTATTTTGTCTTCTGGATTGACAAGAT
GAAGGGGATCGTGCTGAATACCAATTTGTACTTTGATCCTTCCGCGGTAC
GTGATATTCAAACTTGTGCACGTTCCCTGCTCTACAAGCAACAGGTGCGA
ATGAATCACTTGTTGTCGGGGCGTGAGAAGATGAGCAGCTAATGGATGTC
ATACCCCCACACCCCGGGCTCCCAGGCTCCAGACGAATACAATCAGCAAC
ACTCCTGGCTCCGCGCCGAGTTTGCCGTAGCCCGAGCGCAAGGCGCCCGT
CATATCTTCCTCTTCGGCCATCATCCCCTCTTTCTCTTCCATGACGACGA
GGATGAGGACGAAGAGGCACTTGGCTCATCCTCCTTCACCACCAAGGCGG
GAAACAGTGTCTCGATCCCCAATACATACTTTCATCTGCCGCGGGCGAGA
CGGGAAGAAATTCTCGAATTGATGCGACAATACGGGAGCAGCCACTTCTT
CTGTGGTCATTGGCACCAAAACGGCATCGTTCCCAGCGAAAGATACAGGA
TGGAGAACGTTGTCACCAGTGCAGTGGGTCTCCAGATAGGTCGGGATAAG
AGCGGGTTCCGATTGGTCAAGGTTTTTGAGGATGCCACTGTGCACAAGTA
CTTTGGCTTGGAAGAAGTACCGTCCCAGGTTCCTCTCGACCCGAAAGAGA
AGGAGGCGTGGTGATGAAGACGAAGGGAGGGAGGTGGGGAGGAAAGAAGG
GAAGTAGGGAGGTACAGTAAATACGAGGATTAGAGTTAGAGGAGCACTGA
TCTACCCCGAGCATATTCAAAAAAAAAGCAAAGCACAATTGAATGACATA
AAACAAAGCTCTCACGGGATAACATTCATCTGGACATAGCTGCTTGCTTT
CTGGCCTCATTCCGCCACCATTTCTGTCTTGTCGGGGGACTAGGGAAAAG
GCAAGAAAGCAAGCAGTCATGACCAACTGAAGACTATCTCGTGAAGGCTT
TGTTTTGTGTCATTTAATTATGCTTTCCCGCGTATGTGCCCGGGGCAGAT
CAGTGCTTCTCTTACTGTTTTCCCTTCTCTTCCTGCACCTCAAGATGGCA
CCCGGAGGTGGCTGAAGATGAACGCAATTTCCTCTGCCGCATGCACACTA
AACCCACACAACAAGCTTTTTTTCACACGCCCCCCCAACACACCTCTTCC
ACATTTATTGATTACGGCGGCGCAGCGCGCACTTCAACTCTCCGCCCGTA
ACTTTGCCGGACCGGGGTACATTGTTACTACCTCGATCTTACTAAGATGT
CGTACATGCTTCCTCACCTCCGTTCCGGCTGGGCCGTGGACCAAGCCATT
CTTAACGAAGAAAGCAAGGTGGTGGTAATTCGATTCGGGCACGATGAGAA
CGAGACGTGCATGCAGATGGATGAAGTCCTATACAAGATTAGTGAGGACG
TGCGGAACTTCGCGGCGATCTATCTTGTGGACACCTCAGAGGTAGCGGAC
TTCAACGTCATGTACGAGCTGTACGACGAGTGCACTTGCATGTTTTTCTT
TCGTAACAAGCATATCATGATTGACCTCGGCACAGGAAACAACAACAAGA
TCAACTTTCTGATCAATGACAAGCAGGAGATGATCGACATAATCGAAACG
GTCTACAGAGGGGCCCGTAAAGGCAGGGGGCTGGTCGTCTCGCCCAAGGA
CTACTCGACGCGTTATCGATACTAAAGGAGCGGAGGGAGGAATGGAGATG
GAGTGTATATATTGGAACGGGACAGTTCTGAGCGTGTGTTTCTTTTATCC
CTGCACCGCGCCGCAGCGGCAGCATGAGCAGCGGTCGTACCAGCAGCAGT
AGAAGGAAAGGAAGAAATATAACCGAGGTGAATGTAGATCTTGGAAAACA
TAATGAAGAAAAAAAGAACAGGGCGCGTCA back to topprotein sequence of jgi.p|Nanoce1779_2|604923 >mRNA_9019-protein ID=mRNA_9019-protein|Name=jgi.p|Nanoce1779_2|604923|organism=Nannochloropsis oceanica|type=polypeptide|length=143bp
MSYMLPHLRSGWAVDQAILNEESKVVVIRFGHDENETCMQMDEVLYKISE
DVRNFAAIYLVDTSEVADFNVMYELYDECTCMFFFRNKHIMIDLGTGNNN
KINFLINDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY* back to topmRNA from alignment at scaffold_30:221096..224511- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9019 ID=mRNA_9019|Name=jgi.p|Nanoce1779_2|604923|organism=Nannochloropsis oceanica|type=mRNA|length=3416bp|location=Sequence derived from alignment at scaffold_30:221096..224511- (Nannochloropsis oceanica)
AGGCACCCGCACCTGCTGCCCCAGCGAGCTGATTCAACACGCTTGGAAAG
GAACAACACAATGGATGACGACGCCCCACCATCATCATCGGGACGATGCT
CATCAGCAGCCCAAGGAGCCTCCTCTTCCTCCTCCACAACGACCACCATC
AGCACCACGACCACTTCCTCTACCTCTAATTGGATTGGTGCTGGTGGCCG
CAATTTTCCGGACCTCTCCGACCCCCCAAGTCAAGATGGAAAATCGTGCA
CCCCTTCAACTTCCTCCTCACCCTCCCCTCCCTTCTTCTTCGCCACCCTT
GCCGATACCCAACTCGGCGCCATAAACGACAACACCAGCTGGGAGGACGA
AAAACAGCTATGTCGTCTCGCCGTCCAAAAGCTGAACCAATTGAAGCCAA
GGCCACGCTTTGCCATAGTATGTGGTGATTTAGTGCATCACTTTCCAGGC
ATGTATCCCGACACCGACCCCAGTATCCGAGAAAGGCAAATAGCTGATTT
CAAGGTAAGCGTGCCCATTATATCTTTTCATTCCTCTTTGTTCTGCGGCT
GTGGTCACTTCCTGTCTTTAAAGCGTGAATGACGAAATATCTTACACCCT
CCCTTCCTCTCTCTCTACCTCCTTTGAGGCCATCATGGGCGAGATACACC
CTGCCATCCCTCTCCTCTGCGTGTGCGGAAACCACGACGTAGGCAATCGT
CCCACAGCTTCTTCTATAGAGGCATTTAAAAAAGATTTCGGTGATGATTA
TTTTGTCTTCTGGATTGACAAGATGAAGGGGATCGTGCTGAATACCAATT
TGTACTTTGATCCTTCCGCGGTACGTGATATTCAAACTTGTGCACGTTCC
CTGCTCTACAAGCAACAGGTGCGAATGAATCACTTGTTGTCGGGGCGTGA
GAAGATGAGCAGCTAATGGATGTCATACCCCCACACCCCGGGCTCCCAGG
CTCCAGACGAATACAATCAGCAACACTCCTGGCTCCGCGCCGAGTTTGCC
GTAGCCCGAGCGCAAGGCGCCCGTCATATCTTCCTCTTCGGCCATCATCC
CCTCTTTCTCTTCCATGACGACGAGGATGAGGACGAAGAGGCACTTGGCT
CATCCTCCTTCACCACCAAGGCGGGAAACAGTGTCTCGATCCCCAATACA
TACTTTCATCTGCCGCGGGCGAGACGGGAAGAAATTCTCGAATTGATGCG
ACAATACGGGAGCAGGTAGGAAGTAGAAGAAAGAATTTACGAAAAGACGA
AGAGATAAACAGATCTAAATAAACAATTAAAAGGACAAAAAATATAAGCA
AAGTGAGGAACGTTTGTAAATTAAAAATGAAAGCCAGGACAGCTACGAAC
TTATCCCTTCCCTCCTTCCCCGCAGCCACTTCTTCTGTGGTCATTGGCAC
CAAAACGGCATCGTTCCCAGCGAAAGATACAGGATGGAGAACGTTGTCAC
CAGTGCAGTGGGTCTCCAGATAGGTCGGGATAAGAGCGGGTTCCGATTGG
TCAAGGTTTTTGAGGTAAGGAGGGGGGGATGGAGGGAGAAAGGCTGGACG
AGGTTGCTTACTCTCGTTTTTTTTTCAACCTTTACTTTCATTATACTTAG
GATGCCACTGTGCACAAGTACTTTGGCTTGGAAGAAGTACCGTCCCAGGT
TCCTCTCGACCCGAAAGAGAAGGAGGCGTGGTGATGAAGACGAAGGGAGG
GAGGTGGGGAGGAAAGAAGGGAAGTAGGGAGGTACAGTAAATACGAGGAT
TAGAGTTAGAGGAGCACTGATCTACCCCGAGCATATTCAAAAAAAAAGCA
AAGCACAATTGAATGACATAAAACAAAGCTCTCACGGGATAACATTCATC
TGGACATAGCTGCTTGCTTTCTGGCCTCATTCCGCCACCATTTCTGTCTT
GTCGGGGGACTAGGGAAAAGGCAAGAAAGCAAGCAGTCATGACCAACTGA
AGACTATCTCGTGAAGGCTTTGTTTTGTGTCATTTAATTATGCTTTCCCG
CGTATGTGCCCGGGGCAGATCAGTGCTTCTCTTACTGTTTTCCCTTCTCT
TCCTGCACCTCAAGATGGCACCCGGAGGTGGCTGAAGATGAACGCAATTT
CCTCTGCCGCATGCACACTAAACCCACACAACAAGCTTTTTTTCACACGC
CCCCCCAACACACCTCTTCCACATTTATTGATTACGGCGGCGCAGCGCGC
ACTTCAACTCTCCGCCCGTAACTTTGCCGGACCGGGGTACATTGTTACTA
CCTCGATCTTACTAAGGTAAGCCAAAGACCTCTGCTGGCACCACAACTAC
GGGATCATTCCTGCTACCGCGTGCCGACAGACAGAAAGCAGGAATTTCTC
AGTGTGTGGACGGGGAGATGCGTGACTGTGGCGGCACAGAGAATGCTTGC
CTCCTCACCATTATCCTCATAATCATCTCTTTTCGATCAACAAACTTCCG
CCCTTTCTATCCTTCCCGTCCTGTCATTTTCTTCCCAGACATGCACAGAA
ACGCAGTTTGGGGTCTTCTATCTGTATATCCTTGCCTCCTCTTGAGCGCA
TTCACTCCGCATCTCTCACCCATCCCTCCCTCCCTTCTCTCCATCCCTCA
GATGTCGTACATGCTTCCTCACCTCCGTTCCGGCTGGGCCGTGGACCAAG
CCATTCTTAACGAAGAAAGCAAGGTGGTGGTAATTCGATTCGGGCACGAT
GAGAACGAGACGTGCATGCAGATGGATGAAGTCCTATACAAGATTAGTGA
GGACGTGCGGAACTTCGCGGCGATCTATCTTGTGGACACCTCAGAGGTGA
GCTCCCCCTCCCTCCTTCCTGGCTCAAGAAAGAAGATCTGGGTACATTCA
ACACCAAACTGAGAGGATGTTCGGTTTTGGTCACGTAAAATTGTTATGTA
GCCGTTGACGCATCCGCCCCTCCCACACATGTAATATATATATGTATGTA
TACATACATATGCATCTATAAACACAGGTAGCGGACTTCAACGTCATGTA
CGAGCTGTACGACGAGTGCACTTGCATGTTTTTCTTTCGTAACAAGCATA
TCATGATTGACCTCGGCACAGGAAACAACAACAAGATCAACTTTCTGATC
AATGACAAGCAGGAGATGATCGACATAATCGAAACGGTCTACAGAGGGGC
CCGTAAAGGCAGGGGGCTGGTCGTCTCGCCCAAGGACTACTCGACGCGTT
ATCGATACTAAAGGAGCGGAGGGAGGAATGGAGATGGAGTGTATATATTG
GAACGGGACAGTTCTGAGCGTGTGTTTCTTTTATCCCTGCACCGCGCCGC
AGCGGCAGCATGAGCAGCGGTCGTACCAGCAGCAGTAGAAGGAAAGGAAG
AAATATAACCGAGGTGAATGTAGATCTTGGAAAACATAATGAAGAAAAAA
AGAACAGGGCGCGTCA back to topCoding sequence (CDS) from alignment at scaffold_30:221096..224511- >mRNA_9019 ID=mRNA_9019|Name=jgi.p|Nanoce1779_2|604923|organism=Nannochloropsis oceanica|type=CDS|length=858bp|location=Sequence derived from alignment at scaffold_30:221096..224511- (Nannochloropsis oceanica)
GTAGCGGACTTCAACGTCATGTACGAGCTGTACGACGAGTGCACTTGCAT
GTTTTTCTTTCGTAACAAGCATATCATGATTGACCTCGGCACAGGAAACA
ACAACAAGATCAACTTTCTGATCAATGACAAGCAGGAGATGATCGACATA
ATCGAAACGGTCTACAGAGGGGCCCGTAAAGGCAGGGGGCTGGTCGTCTC
GCCCAAGGACTACTCGACGCGTTATCGATACTAAATGTCGTACATGCTTC
CTCACCTCCGTTCCGGCTGGGCCGTGGACCAAGCCATTCTTAACGAAGAA
AGCAAGGTGGTGGTAATTCGATTCGGGCACGATGAGAACGAGACGTGCAT
GCAGATGGATGAAGTCCTATACAAGATTAGTGAGGACGTGCGGAACTTCG
CGGCGATCTATCTTGTGGACACCTCAGAGGTAGCGGACTTCAACGTCATG
TACGAGCTGTACGACGAGTGCACTTGCATGTTTTTCTTTCGTAACAAGCA
TATCATGATTGACCTCGGCACAGGAAACAACAACAAGATCAACTTTCTGA
TCAATGACAAGCAGGAGATGATCGACATAATCGAAACGGTCTACAGAGGG
GCCCGTAAAGGCAGGGGGCTGGTCGTCTCGCCCAAGGACTACTCGACGCG
TTATCGATACTAAATGTCGTACATGCTTCCTCACCTCCGTTCCGGCTGGG
CCGTGGACCAAGCCATTCTTAACGAAGAAAGCAAGGTGGTGGTAATTCGA
TTCGGGCACGATGAGAACGAGACGTGCATGCAGATGGATGAAGTCCTATA
CAAGATTAGTGAGGACGTGCGGAACTTCGCGGCGATCTATCTTGTGGACA
CCTCAGAG back to top
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