|
Properties
Property Name | Value |
TranscriptId | 633353 |
Track | FilteredModels2 |
ProteinId | 633267 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_30 | supercontig | scaffold_30:207388..209420 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9013 ID=mRNA_9013|Name=jgi.p|Nanoce1779_2|633267|organism=Nannochloropsis oceanica|type=mRNA|length=1363bp AAATGACTACCGTGGACATTCCCGATTATGACGGTGCTTACCAGGCCAAA CCGGACACACCTGAGCGTTTCTATCTATGTACAGCTTTCAATTTTGGTCT TACATGTGCAGCAGGGAGGAGCGTGCCATTGAAGCGTGTGAACGTCAAAT GCAACGTGCTAGACTTCCTCGCCGAGGTCTCAGTCGAGCAGACCTTTCAA AATGATGACCCCTCCACGGCCGTTGAAGTCATCTACCGTTTCCCACTGGA CGCCCAAGCCATCCTCACCTCATTTTCTACGCAGAAGAACGAGGGTCCCG TCATCCATGGCAAGGTGACGGAGAAGGAAGAGGCGAAAGCCACGTATGAG GAAGCCTTGGCCTGTGGACAAGGTGGGTATCTGCTGCATGAGGAAGGGGA ATTGAAAGACGTTTTCTCGCTCAAAGTGGGAAACTTGCAACCAGGAGAGA CGGTCAATGTCAAACTAACGTATGTTGCTCAGGTGGATGAGGAGGAAGAG GAGGAGAAGGAGGAGAAGGAGGAGGGGGAGGAAGCGGAAGGAAGCAAGTT GCCACAGAAGACGACACCCAAGAATAAGAAAAACAAGAAAAAAAGCTCCT CCTTGCGTCTCGTCATCCCCACGGCCGTCGCCCCTCGCTATATGCCGTCC ATGGAACAGTCGTCTGAACTGTACAGACACGCGGAGACTGCCTTGGGGTC CTGGCCAGAAGACCTGTTAATGCTCGAAGGAAATGTCAGATCTGCCTCCA GAATCACCCATCTCGTCCCTCATACATTAAAAGAGAAGACGATGGTGTCT GTGAAGGAGGAAGGGAAGGAGGGATCGTTTCATGCGGTGGTGCCTTACTT AACGGAGGATTTCGTTTTGTTGATTGGGTTTGAGGAGAGGGTCAAAGATC GGGCGTGGCTGGAACCGTCCACGGGGGCATTAACTGTCAGCGTGGGTTTG GGCGAAGACCAGCTCCCCGATACCGAAGAGAGCAAAGGGGAATTCGTCTT CGTCATCGATCGTTCGGGCTCCATGGATGGGTCAAAGATTCAGCATGCGC CCATCTAATTTGACATCTGCTTTCACCACTGCTGCTGCTATGCCTGCTGC TGCCACTGCTGCTTTTGGGACTCCTGTTTTATTCACGGACGAGACCAAAA AAGTTGCCTTGGAGCATTGTGCACAAATGGAAGCAAATATGGGAGGGACG GAGCTCCTTGCTCCTCTCCGTGCATTGTCCACGCTTCCCCCTTCCCTCCC TCGTCAGGTGTTCCTGATTACTGATGGTCAGGTGGGAAACACGGGAGAGG TGTTGGGGTGGGTGAGGAGGGAGGGACGGAGGGAGGGTACGAGGTTCTTT GCGGTTGGAATCG back to topprotein sequence of jgi.p|Nanoce1779_2|633267 >mRNA_9013-protein ID=mRNA_9013-protein|Name=jgi.p|Nanoce1779_2|633267|organism=Nannochloropsis oceanica|type=polypeptide|length=352bp MTTVDIPDYDGAYQAKPDTPERFYLCTAFNFGLTCAAGRSVPLKRVNVKC NVLDFLAEVSVEQTFQNDDPSTAVEVIYRFPLDAQAILTSFSTQKNEGPV IHGKVTEKEEAKATYEEALACGQGGYLLHEEGELKDVFSLKVGNLQPGET VNVKLTYVAQVDEEEEEEKEEKEEGEEAEGSKLPQKTTPKNKKNKKKSSS LRLVIPTAVAPRYMPSMEQSSELYRHAETALGSWPEDLLMLEGNVRSASR ITHLVPHTLKEKTMVSVKEEGKEGSFHAVVPYLTEDFVLLIGFEERVKDR AWLEPSTGALTVSVGLGEDQLPDTEESKGEFVFVIDRSGSMDGSKIQHAP I* back to topmRNA from alignment at scaffold_30:207388..209420+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9013 ID=mRNA_9013|Name=jgi.p|Nanoce1779_2|633267|organism=Nannochloropsis oceanica|type=mRNA|length=2033bp|location=Sequence derived from alignment at scaffold_30:207388..209420+ (Nannochloropsis oceanica) AAATGACTACCGTGGACATTCCCGATTATGACGGTGCTTACCAGGCCAAA
CCGGACACACCTGAGCGTTTCTATCTATGTACAGCTTTCAATTTTGGTCT
TACATGTAAGTCTAACTTCCTATCCCCTCCCCTCCTCTTCTTCATGCCCC
TCTCCCCGTCTTCCTTCACAGCATTATTCACGAAGAAGCTGACCAACTAT
TCGCATATACTTGGATGACCCACTTACAGGTGCAGCAGGGAGGAGCGTGC
CATTGAAGCGTGTGAACGTCAAATGCAACGTGCTAGACTTCCTCGCCGAG
GTAAAGAAGGTGGAAGAAGGAAGGGAAGGAAAGGAAGGGAAGGAGGAGAG
AAGGAATCGAAGAATAGCAGTAGTGAGTGTTTTTTTACCATTTTCCAAAG
TCATACAGCCTTGATGGGTCTTATATGAAGAGTGATCATAATAAGCGACA
GGAAAAGCATTTGATCTCTTTCATCAGCTCACATTGTGATCCACCCCTCC
GTCCCTCCCTCCCTCCCCTTTTATCATATCTCTCAGGTCTCAGTCGAGCA
GACCTTTCAAAATGATGACCCCTCCACGGCCGTTGAAGTCATCTACCGTT
TCCCACTGGACGCCCAAGCCATCCTCACCTCATTTTCTACGCAGAAGAAC
GAGGGTCCCGTCATCCATGGCAAGGTGACGGAGAAGGAAGAGGCGAAAGC
CACGTATGAGGAAGCCTTGGCCTGTGGACAAGGTGGGTATCTGCTGCATG
AGGAAGGGGAATTGAAAGACGTTTTCTCGCTCAAAGTGGGAAACTTGCAA
CCAGGAGAGACGGTCAATGTCAAACTAACGTATGTTGCTCAGGTGGATGA
GGAGGAAGAGGAGGAGAAGGAGGAGAAGGAGGAGGGGGAGGAAGCGGAAG
GAAGCAAGTTGCCACAGAAGACGACACCCAAGAATAAGAAAAACAAGAAA
AAAAGCTCCTCCTTGCGTCTCGTCATCCCCACGGCCGTCGCCCCTCGCTA
TATGCCGTCCATGGAACAGTCGTCTGAACTGTACAGACACGCGGAGACTG
CCTTGGGGTCCTGGCCAGAAGACCTGTTAATGCTCGAAGGAAATGTCAGA
TCTGCCTCCAGAATCACCCATCTCGTCCCTCATACATTAAAAGAGAAGAC
GATGGTGTCTGTGAAGGAGGAAGGGAAGGAGGGATCGTTTCATGCGGTGG
TGCCTTACTTAACGGAGGATTTCGTTTTGTTGATTGGGTTTGAGGAGAGG
GTCAAAGATCGGGCGTGGCTGGAACCGTCCACGGGGGCATTAACTGTCAG
CGTGGGTTTGGGCGAAGGTACGTGAGAGATGCACCAGAGCCTGATTTCCC
CTCTGCTGCCCATTGACTGTCTCGTCTTCCGTGTTTTGTGGGTGCTCCAA
GCCGCCCTTACCAGCTTTATCGTTGTCGAATATCTCTAGTCCTTAGCACC
TAACCCACCATCTCCTCCTCCCTCGTTCCCCCTTCCTTCACAGACCAGCT
CCCCGATACCGAAGAGAGCAAAGGGGAATTCGTCTTCGTCATCGATCGTT
CGGGCTCCATGGATGGGTCAAAGATTCAGCATGCGCGTGAGGCCCTCGCT
CTGTGTATCTCCGCCCTACCTGAAGGCAGTCGTTTTCAGATCCTCTCCTT
TGGGAGCACCTTCGCCCCTCTCTTCCCGGCTTCCACTCCTACCTCCTTCC
CTCCCTCCCCCGTGGTCCAGCCATCTAATTTGACATCTGCTTTCACCACT
GCTGCTGCTATGCCTGCTGCTGCCACTGCTGCTTTTGGGACTCCTGTTTT
ATTCACGGACGAGACCAAAAAAGTTGCCTTGGAGCATTGTGCACAAATGG
AAGCAAATATGGGAGGGACGGAGCTCCTTGCTCCTCTCCGTGCATTGTCC
ACGCTTCCCCCTTCCCTCCCTCGTCAGGTGTTCCTGATTACTGATGGTCA
GGTGGGAAACACGGGAGAGGTGTTGGGGTGGGTGAGGAGGGAGGGACGGA
GGGAGGGTACGAGGTTCTTTGCGGTTGGAATCG back to topCoding sequence (CDS) from alignment at scaffold_30:207388..209420+ >mRNA_9013 ID=mRNA_9013|Name=jgi.p|Nanoce1779_2|633267|organism=Nannochloropsis oceanica|type=CDS|length=5280bp|location=Sequence derived from alignment at scaffold_30:207388..209420+ (Nannochloropsis oceanica) ATGACTACCGTGGACATTCCCGATTATGACGGTGCTTACCAGGCCAAACC GGACACACCTGAGCGTTTCTATCTATGTACAGCTTTCAATTTTGGTCTTA CATGTGCAGCAGGGAGGAGCGTGCCATTGAAGCGTGTGAACGTCAAATGC AACGTGCTAGACTTCCTCGCCGAGGTCTCAGTCGAGCAGACCTTTCAAAA TGATGACCCCTCCACGGCCGTTGAAGTCATCTACCGTTTCCCACTGGACG CCCAAGCCATCCTCACCTCATTTTCTACGCAGAAGAACGAGGGTCCCGTC ATCCATGGCAAGGTGACGGAGAAGGAAGAGGCGAAAGCCACGTATGAGGA AGCCTTGGCCTGTGGACAAGGTGGGTATCTGCTGCATGAGGAAGGGGAAT TGAAAGACGTTTTCTCGCTCAAAGTGGGAAACTTGCAACCAGGAGAGACG GTCAATGTCAAACTAACGTATGTTGCTCAGGTGGATGAGGAGGAAGAGGA GGAGAAGGAGGAGAAGGAGGAGGGGGAGGAAGCGGAAGGAAGCAAGTTGC CACAGAAGACGACACCCAAGAATAAGAAAAACAAGAAAAAAAGCTCCTCC TTGCGTCTCGTCATCCCCACGGCCGTCGCCCCTCGCTATATGCCGTCCAT GGAACAGTCGTCTGAACTGTACAGACACGCGGAGACTGCCTTGGGGTCCT GGCCAGAAGACCTGTTAATGCTCGAAGGAAATGTCAGATCTGCCTCCAGA ATCACCCATCTCGTCCCTCATACATTAAAAGAGAAGACGATGGTGTCTGT GAAGGAGGAAGGGAAGGAGGGATCGTTTCATGCGGTGGTGCCTTACTTAA CGGAGGATTTCGTTTTGTTGATTGGGTTTGAGGAGAGGGTCAAAGATCGG GCGTGGCTGGAACCGTCCACGGGGGCATTAACTGTCAGCGTGGGTTTGGG CGAAGACCAGCTCCCCGATACCGAAGAGAGCAAAGGGGAATTCGTCTTCG TCATCGATCGTTCGGGCTCCATGGATGGGTCAAAGATTCAGCATGCGCCC ATCTAAATGACTACCGTGGACATTCCCGATTATGACGGTGCTTACCAGGC CAAACCGGACACACCTGAGCGTTTCTATCTATGTACAGCTTTCAATTTTG GTCTTACATGTGCAGCAGGGAGGAGCGTGCCATTGAAGCGTGTGAACGTC AAATGCAACGTGCTAGACTTCCTCGCCGAGGTCTCAGTCGAGCAGACCTT TCAAAATGATGACCCCTCCACGGCCGTTGAAGTCATCTACCGTTTCCCAC TGGACGCCCAAGCCATCCTCACCTCATTTTCTACGCAGAAGAACGAGGGT CCCGTCATCCATGGCAAGGTGACGGAGAAGGAAGAGGCGAAAGCCACGTA TGAGGAAGCCTTGGCCTGTGGACAAGGTGGGTATCTGCTGCATGAGGAAG GGGAATTGAAAGACGTTTTCTCGCTCAAAGTGGGAAACTTGCAACCAGGA GAGACGGTCAATGTCAAACTAACGTATGTTGCTCAGGTGGATGAGGAGGA AGAGGAGGAGAAGGAGGAGAAGGAGGAGGGGGAGGAAGCGGAAGGAAGCA AGTTGCCACAGAAGACGACACCCAAGAATAAGAAAAACAAGAAAAAAAGC TCCTCCTTGCGTCTCGTCATCCCCACGGCCGTCGCCCCTCGCTATATGCC GTCCATGGAACAGTCGTCTGAACTGTACAGACACGCGGAGACTGCCTTGG GGTCCTGGCCAGAAGACCTGTTAATGCTCGAAGGAAATGTCAGATCTGCC TCCAGAATCACCCATCTCGTCCCTCATACATTAAAAGAGAAGACGATGGT GTCTGTGAAGGAGGAAGGGAAGGAGGGATCGTTTCATGCGGTGGTGCCTT ACTTAACGGAGGATTTCGTTTTGTTGATTGGGTTTGAGGAGAGGGTCAAA GATCGGGCGTGGCTGGAACCGTCCACGGGGGCATTAACTGTCAGCGTGGG TTTGGGCGAAGACCAGCTCCCCGATACCGAAGAGAGCAAAGGGGAATTCG TCTTCGTCATCGATCGTTCGGGCTCCATGGATGGGTCAAAGATTCAGCAT GCGCCCATCTAAATGACTACCGTGGACATTCCCGATTATGACGGTGCTTA CCAGGCCAAACCGGACACACCTGAGCGTTTCTATCTATGTACAGCTTTCA ATTTTGGTCTTACATGTGCAGCAGGGAGGAGCGTGCCATTGAAGCGTGTG AACGTCAAATGCAACGTGCTAGACTTCCTCGCCGAGGTCTCAGTCGAGCA GACCTTTCAAAATGATGACCCCTCCACGGCCGTTGAAGTCATCTACCGTT TCCCACTGGACGCCCAAGCCATCCTCACCTCATTTTCTACGCAGAAGAAC GAGGGTCCCGTCATCCATGGCAAGGTGACGGAGAAGGAAGAGGCGAAAGC CACGTATGAGGAAGCCTTGGCCTGTGGACAAGGTGGGTATCTGCTGCATG AGGAAGGGGAATTGAAAGACGTTTTCTCGCTCAAAGTGGGAAACTTGCAA CCAGGAGAGACGGTCAATGTCAAACTAACGTATGTTGCTCAGGTGGATGA GGAGGAAGAGGAGGAGAAGGAGGAGAAGGAGGAGGGGGAGGAAGCGGAAG GAAGCAAGTTGCCACAGAAGACGACACCCAAGAATAAGAAAAACAAGAAA AAAAGCTCCTCCTTGCGTCTCGTCATCCCCACGGCCGTCGCCCCTCGCTA TATGCCGTCCATGGAACAGTCGTCTGAACTGTACAGACACGCGGAGACTG CCTTGGGGTCCTGGCCAGAAGACCTGTTAATGCTCGAAGGAAATGTCAGA TCTGCCTCCAGAATCACCCATCTCGTCCCTCATACATTAAAAGAGAAGAC GATGGTGTCTGTGAAGGAGGAAGGGAAGGAGGGATCGTTTCATGCGGTGG TGCCTTACTTAACGGAGGATTTCGTTTTGTTGATTGGGTTTGAGGAGAGG GTCAAAGATCGGGCGTGGCTGGAACCGTCCACGGGGGCATTAACTGTCAG CGTGGGTTTGGGCGAAGACCAGCTCCCCGATACCGAAGAGAGCAAAGGGG AATTCGTCTTCGTCATCGATCGTTCGGGCTCCATGGATGGGTCAAAGATT CAGCATGCGCCCATCTAAATGACTACCGTGGACATTCCCGATTATGACGG TGCTTACCAGGCCAAACCGGACACACCTGAGCGTTTCTATCTATGTACAG CTTTCAATTTTGGTCTTACATGTGCAGCAGGGAGGAGCGTGCCATTGAAG CGTGTGAACGTCAAATGCAACGTGCTAGACTTCCTCGCCGAGGTCTCAGT CGAGCAGACCTTTCAAAATGATGACCCCTCCACGGCCGTTGAAGTCATCT ACCGTTTCCCACTGGACGCCCAAGCCATCCTCACCTCATTTTCTACGCAG AAGAACGAGGGTCCCGTCATCCATGGCAAGGTGACGGAGAAGGAAGAGGC GAAAGCCACGTATGAGGAAGCCTTGGCCTGTGGACAAGGTGGGTATCTGC TGCATGAGGAAGGGGAATTGAAAGACGTTTTCTCGCTCAAAGTGGGAAAC TTGCAACCAGGAGAGACGGTCAATGTCAAACTAACGTATGTTGCTCAGGT GGATGAGGAGGAAGAGGAGGAGAAGGAGGAGAAGGAGGAGGGGGAGGAAG CGGAAGGAAGCAAGTTGCCACAGAAGACGACACCCAAGAATAAGAAAAAC AAGAAAAAAAGCTCCTCCTTGCGTCTCGTCATCCCCACGGCCGTCGCCCC TCGCTATATGCCGTCCATGGAACAGTCGTCTGAACTGTACAGACACGCGG AGACTGCCTTGGGGTCCTGGCCAGAAGACCTGTTAATGCTCGAAGGAAAT GTCAGATCTGCCTCCAGAATCACCCATCTCGTCCCTCATACATTAAAAGA GAAGACGATGGTGTCTGTGAAGGAGGAAGGGAAGGAGGGATCGTTTCATG CGGTGGTGCCTTACTTAACGGAGGATTTCGTTTTGTTGATTGGGTTTGAG GAGAGGGTCAAAGATCGGGCGTGGCTGGAACCGTCCACGGGGGCATTAAC TGTCAGCGTGGGTTTGGGCGAAGACCAGCTCCCCGATACCGAAGAGAGCA AAGGGGAATTCGTCTTCGTCATCGATCGTTCGGGCTCCATGGATGGGTCA AAGATTCAGCATGCGCCCATCTAAATGACTACCGTGGACATTCCCGATTA TGACGGTGCTTACCAGGCCAAACCGGACACACCTGAGCGTTTCTATCTAT GTACAGCTTTCAATTTTGGTCTTACATGTGCAGCAGGGAGGAGCGTGCCA TTGAAGCGTGTGAACGTCAAATGCAACGTGCTAGACTTCCTCGCCGAGGT CTCAGTCGAGCAGACCTTTCAAAATGATGACCCCTCCACGGCCGTTGAAG TCATCTACCGTTTCCCACTGGACGCCCAAGCCATCCTCACCTCATTTTCT ACGCAGAAGAACGAGGGTCCCGTCATCCATGGCAAGGTGACGGAGAAGGA AGAGGCGAAAGCCACGTATGAGGAAGCCTTGGCCTGTGGACAAGGTGGGT ATCTGCTGCATGAGGAAGGGGAATTGAAAGACGTTTTCTCGCTCAAAGTG GGAAACTTGCAACCAGGAGAGACGGTCAATGTCAAACTAACGTATGTTGC TCAGGTGGATGAGGAGGAAGAGGAGGAGAAGGAGGAGAAGGAGGAGGGGG AGGAAGCGGAAGGAAGCAAGTTGCCACAGAAGACGACACCCAAGAATAAG AAAAACAAGAAAAAAAGCTCCTCCTTGCGTCTCGTCATCCCCACGGCCGT CGCCCCTCGCTATATGCCGTCCATGGAACAGTCGTCTGAACTGTACAGAC ACGCGGAGACTGCCTTGGGGTCCTGGCCAGAAGACCTGTTAATGCTCGAA GGAAATGTCAGATCTGCCTCCAGAATCACCCATCTCGTCCCTCATACATT AAAAGAGAAGACGATGGTGTCTGTGAAGGAGGAAGGGAAGGAGGGATCGT TTCATGCGGTGGTGCCTTACTTAACGGAGGATTTCGTTTTGTTGATTGGG TTTGAGGAGAGGGTCAAAGATCGGGCGTGGCTGGAACCGTCCACGGGGGC ATTAACTGTCAGCGTGGGTTTGGGCGAAGACCAGCTCCCCGATACCGAAG AGAGCAAAGGGGAATTCGTCTTCGTCATCGATCGTTCGGGCTCCATGGAT GGGTCAAAGATTCAGCATGCGCCCATCTAA back to top
|