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Properties
| Property Name | Value |
|---|
| TranscriptId | 249821 |
| Track | FilteredModels2 |
| ProteinId | 249735 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_30 | supercontig | scaffold_30:195661..197401 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9010 ID=mRNA_9010|Name=jgi.p|Nanoce1779_2|249735|organism=Nannochloropsis oceanica|type=mRNA|length=1064bp
GATAGCTCCGTGGCCAAGCCCTTCCCCTCCATTACTTCGCTCACCCCACT
CCTCCCTTCCCACTCCATCATCATCCACAGCACCTTTTTTTTTCCTTTCC
GACCATGGCGTCCACTGCCCCTTCCGCCTCCCCTTCCTCCACGGGTGACC
AACCCAAGCCGAACATCGGCGAGATACTGAAAAAGTCGGGTATGCGCGCC
CTGGGAGGTGGGATGGCCGGCGCGGCTGCCATGGGTATCAACGTGGGGGC
ATTAATGTGGCTCCGGACCACGGTGAACTACCAGTACCGTAAGGGCACCA
CCATGCGCGTGGCCCTCAAGACGCTCTACGCCGACGGTGGCATTCCCCGC
TTTTATCAAGGCCTCCTTCCCGCCCTTGTCCAGGGACCGGCCTCTCGATT
CGGAGACACGGCGGCAAATGCGGGGGTGATCACGCTGCTGGACTCGTTCG
CAGAGACCAAGGACCTCCCCGTCCTGGTCAAGACGGCCGCTGCCTCGGCC
ACTGCCGCCTCCTGGCGCATTTTCCTCATGCCTGTTGATACTTTGAAGAC
GATCAAGCAAGTGGAGGGCAAAGATGGCTTCAAGGTGCTCATGGCCAAGA
TGAAGATTCACGGGCCGGGCGTAATGTACCACGGTGCCCTGGCCGCCTTT
GCCGCTAATTTACTAGGGCACTACCCGTGGTTTGCCACCTATAACTACAT
GCAGGAGGCCCTGCCCAAGACGGATGACTTCAAGTTGAAGCTGTGCCGTA
ATGCTGTCATCGGTTTCAGTGCCTCGGCCATCTCGGACACTGTCTCCAAC
AGCGTCCGCGTGGTGAAGGTCTACAAGCAAGCCAACGCGGAGCACATCAC
TTACCCCGACGCCGTGAAGCGCATCATTGCTGAGGACGGGCTCATCGGTC
TTTTCGGGCGGGGGCTCAGCACCAAGATTTTTTCCAACGGTAAGTAAGCG
TGCCGTCCCTCTCTCCTTGTCTTCTCTACCTCCCTCTCGACCGCCCTTGT
TGGCGTATGTGTGAGAATAAGAAGACGAGGGTCGGCGGACGCATCGGACG
GGGTCTCATCACTA back to topprotein sequence of jgi.p|Nanoce1779_2|249735 >mRNA_9010-protein ID=mRNA_9010-protein|Name=jgi.p|Nanoce1779_2|249735|organism=Nannochloropsis oceanica|type=polypeptide|length=281bp
MASTAPSASPSSTGDQPKPNIGEILKKSGMRALGGGMAGAAAMGINVGAL
MWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFG
DTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTI
KQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQ
EALPKTDDFKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITY
PDAVKRIIAEDGLIGLFGRGLSTKIFSNGK* back to topmRNA from alignment at scaffold_30:195661..197401- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9010 ID=mRNA_9010|Name=jgi.p|Nanoce1779_2|249735|organism=Nannochloropsis oceanica|type=mRNA|length=1741bp|location=Sequence derived from alignment at scaffold_30:195661..197401- (Nannochloropsis oceanica)
GATAGCTCCGTGGCCAAGCCCTTCCCCTCCATTACTTCGCTCACCCCACT
CCTCCCTTCCCACTCCATCATCATCCACAGCACCTTTTTTTTTCCTTTCC
GACCATGGCGTCCACTGCCCCTTCCGCCTCCCCTTCCTCCACGGGTGACC
AACCCAAGCCGAACATCGGCGAGATACTGAAAAAGTCGGGTATGCGCGCC
CTGGGAGGTGGGATGGCCGGCGCGGCTGCCATGGGTATCAACGTGGGGGC
ATTAATGTGGCTCCGGACCACGGTGAACTACCAGTACCGTAAGGTGAGGA
GATAATGTATGTATTATCATAATGCACGTGTGTGTCTGATCACATCGTCC
TCGCTCCCCTTTCTCCTCCAGGGCACCACCATGCGCGTGGCCCTCAAGAC
GCTCTACGCCGACGGTGGCATTCCCCGCTTTTATCAAGGCCTCCTTCCCG
CCCTTGTCCAGGGACCGGCCTCTCGATTCGGAGACACGGCGGCAAATGCG
GGGGTGATCACGCTGCTGGACTCGTTCGCAGAGACCAAGGTGATGAGGAA
GGGGAAAGGGGAAGGGGGGGCGAATGGGAGGGAGAGAAGGAAGGCAGGGG
TCCATATCTTCATGTCTTTCTCTTCGGCTTAATTAATTTCTGTATCTTTA
AGAAGAGTAGCATAAAATGCCTTTTTTCTTTGCTCTTTCCCCCCTTATTG
CCGCCTCGCTGCTCATCATCGTCATCGTCCTCCCTCCCCTCTCTCTCCTT
TCCCCAGGACCTCCCCGTCCTGGTCAAGACGGCCGCTGCCTCGGCCACTG
CCGCCTCCTGGCGCATTTTCCTCATGCCTGTTGATACTTTGAAGACGATC
AAGCAAGTGGAGGGCAAAGATGGCTTCAAGGTGCTCATGGCCAAGATGAA
GGTCCGTCCCCTCCCTCCCCCCCTGCCCCCCTTCTCATCTCCTTTTGTTG
CTGGTCTGCGACCTACATAAAAAAATATGGCGTATACACATATGTTCACA
CACACTCACACATACATACACATCTTCATGCATGTATACATACGTATATA
CATACACATATACATATATATATTCATACATACATGCCTACATATACACC
GTAGATTCACGGGCCGGGCGTAATGTACCACGGTGCCCTGGCCGCCTTTG
CCGCTAATTTACTAGGGCACTACCCGTGGTTTGCCACCTATAACTACATG
CAGGAGGCCCTGCCCAAGACGGATGACTTCAAGTTGAAGCTGTGCCGTAA
TGCTGTCATCGGTTTCAGTGCCTCGGCCATCTCGGACACTGTCTCCAACA
GCGTCCGCGTGGTGAAGGTGAGGCAGGAGGGAGGGAGGGAGGGTGAGAGC
GAGGGAGGGTGACAGCGGCCGATTATTTGCCGTGTTTCTCTTCTTTTCGC
TCTATTCTTTTTCCCCTTCTCCAAATCTGAACGGCCTGCCACTTATGTCA
CTCCTTCCTCCCCTCGCTCCCCCCCTCCCTCCCCCCCTCCCTCAGGTCTA
CAAGCAAGCCAACGCGGAGCACATCACTTACCCCGACGCCGTGAAGCGCA
TCATTGCTGAGGACGGGCTCATCGGTCTTTTCGGGCGGGGGCTCAGCACC
AAGATTTTTTCCAACGGTAAGTAAGCGTGCCGTCCCTCTCTCCTTGTCTT
CTCTACCTCCCTCTCGACCGCCCTTGTTGGCGTATGTGTGAGAATAAGAA
GACGAGGGTCGGCGGACGCATCGGACGGGGTCTCATCACTA back to topCoding sequence (CDS) from alignment at scaffold_30:195661..197401- >mRNA_9010 ID=mRNA_9010|Name=jgi.p|Nanoce1779_2|249735|organism=Nannochloropsis oceanica|type=CDS|length=4215bp|location=Sequence derived from alignment at scaffold_30:195661..197401- (Nannochloropsis oceanica)
GTCTACAAGCAAGCCAACGCGGAGCACATCACTTACCCCGACGCCGTGAA
GCGCATCATTGCTGAGGACGGGCTCATCGGTCTTTTCGGGCGGGGGCTCA
GCACCAAGATTTTTTCCAACGGTAAGTAAATTCACGGGCCGGGCGTAATG
TACCACGGTGCCCTGGCCGCCTTTGCCGCTAATTTACTAGGGCACTACCC
GTGGTTTGCCACCTATAACTACATGCAGGAGGCCCTGCCCAAGACGGATG
ACTTCAAGTTGAAGCTGTGCCGTAATGCTGTCATCGGTTTCAGTGCCTCG
GCCATCTCGGACACTGTCTCCAACAGCGTCCGCGTGGTGAAGGACCTCCC
CGTCCTGGTCAAGACGGCCGCTGCCTCGGCCACTGCCGCCTCCTGGCGCA
TTTTCCTCATGCCTGTTGATACTTTGAAGACGATCAAGCAAGTGGAGGGC
AAAGATGGCTTCAAGGTGCTCATGGCCAAGATGAAGGGCACCACCATGCG
CGTGGCCCTCAAGACGCTCTACGCCGACGGTGGCATTCCCCGCTTTTATC
AAGGCCTCCTTCCCGCCCTTGTCCAGGGACCGGCCTCTCGATTCGGAGAC
ACGGCGGCAAATGCGGGGGTGATCACGCTGCTGGACTCGTTCGCAGAGAC
CAAGATGGCGTCCACTGCCCCTTCCGCCTCCCCTTCCTCCACGGGTGACC
AACCCAAGCCGAACATCGGCGAGATACTGAAAAAGTCGGGTATGCGCGCC
CTGGGAGGTGGGATGGCCGGCGCGGCTGCCATGGGTATCAACGTGGGGGC
ATTAATGTGGCTCCGGACCACGGTGAACTACCAGTACCGTAAGGTCTACA
AGCAAGCCAACGCGGAGCACATCACTTACCCCGACGCCGTGAAGCGCATC
ATTGCTGAGGACGGGCTCATCGGTCTTTTCGGGCGGGGGCTCAGCACCAA
GATTTTTTCCAACGGTAAGTAAATTCACGGGCCGGGCGTAATGTACCACG
GTGCCCTGGCCGCCTTTGCCGCTAATTTACTAGGGCACTACCCGTGGTTT
GCCACCTATAACTACATGCAGGAGGCCCTGCCCAAGACGGATGACTTCAA
GTTGAAGCTGTGCCGTAATGCTGTCATCGGTTTCAGTGCCTCGGCCATCT
CGGACACTGTCTCCAACAGCGTCCGCGTGGTGAAGGACCTCCCCGTCCTG
GTCAAGACGGCCGCTGCCTCGGCCACTGCCGCCTCCTGGCGCATTTTCCT
CATGCCTGTTGATACTTTGAAGACGATCAAGCAAGTGGAGGGCAAAGATG
GCTTCAAGGTGCTCATGGCCAAGATGAAGGGCACCACCATGCGCGTGGCC
CTCAAGACGCTCTACGCCGACGGTGGCATTCCCCGCTTTTATCAAGGCCT
CCTTCCCGCCCTTGTCCAGGGACCGGCCTCTCGATTCGGAGACACGGCGG
CAAATGCGGGGGTGATCACGCTGCTGGACTCGTTCGCAGAGACCAAGATG
GCGTCCACTGCCCCTTCCGCCTCCCCTTCCTCCACGGGTGACCAACCCAA
GCCGAACATCGGCGAGATACTGAAAAAGTCGGGTATGCGCGCCCTGGGAG
GTGGGATGGCCGGCGCGGCTGCCATGGGTATCAACGTGGGGGCATTAATG
TGGCTCCGGACCACGGTGAACTACCAGTACCGTAAGGTCTACAAGCAAGC
CAACGCGGAGCACATCACTTACCCCGACGCCGTGAAGCGCATCATTGCTG
AGGACGGGCTCATCGGTCTTTTCGGGCGGGGGCTCAGCACCAAGATTTTT
TCCAACGGTAAGTAAATTCACGGGCCGGGCGTAATGTACCACGGTGCCCT
GGCCGCCTTTGCCGCTAATTTACTAGGGCACTACCCGTGGTTTGCCACCT
ATAACTACATGCAGGAGGCCCTGCCCAAGACGGATGACTTCAAGTTGAAG
CTGTGCCGTAATGCTGTCATCGGTTTCAGTGCCTCGGCCATCTCGGACAC
TGTCTCCAACAGCGTCCGCGTGGTGAAGGACCTCCCCGTCCTGGTCAAGA
CGGCCGCTGCCTCGGCCACTGCCGCCTCCTGGCGCATTTTCCTCATGCCT
GTTGATACTTTGAAGACGATCAAGCAAGTGGAGGGCAAAGATGGCTTCAA
GGTGCTCATGGCCAAGATGAAGGGCACCACCATGCGCGTGGCCCTCAAGA
CGCTCTACGCCGACGGTGGCATTCCCCGCTTTTATCAAGGCCTCCTTCCC
GCCCTTGTCCAGGGACCGGCCTCTCGATTCGGAGACACGGCGGCAAATGC
GGGGGTGATCACGCTGCTGGACTCGTTCGCAGAGACCAAGATGGCGTCCA
CTGCCCCTTCCGCCTCCCCTTCCTCCACGGGTGACCAACCCAAGCCGAAC
ATCGGCGAGATACTGAAAAAGTCGGGTATGCGCGCCCTGGGAGGTGGGAT
GGCCGGCGCGGCTGCCATGGGTATCAACGTGGGGGCATTAATGTGGCTCC
GGACCACGGTGAACTACCAGTACCGTAAGGTCTACAAGCAAGCCAACGCG
GAGCACATCACTTACCCCGACGCCGTGAAGCGCATCATTGCTGAGGACGG
GCTCATCGGTCTTTTCGGGCGGGGGCTCAGCACCAAGATTTTTTCCAACG
GTAAGTAAATTCACGGGCCGGGCGTAATGTACCACGGTGCCCTGGCCGCC
TTTGCCGCTAATTTACTAGGGCACTACCCGTGGTTTGCCACCTATAACTA
CATGCAGGAGGCCCTGCCCAAGACGGATGACTTCAAGTTGAAGCTGTGCC
GTAATGCTGTCATCGGTTTCAGTGCCTCGGCCATCTCGGACACTGTCTCC
AACAGCGTCCGCGTGGTGAAGGACCTCCCCGTCCTGGTCAAGACGGCCGC
TGCCTCGGCCACTGCCGCCTCCTGGCGCATTTTCCTCATGCCTGTTGATA
CTTTGAAGACGATCAAGCAAGTGGAGGGCAAAGATGGCTTCAAGGTGCTC
ATGGCCAAGATGAAGGGCACCACCATGCGCGTGGCCCTCAAGACGCTCTA
CGCCGACGGTGGCATTCCCCGCTTTTATCAAGGCCTCCTTCCCGCCCTTG
TCCAGGGACCGGCCTCTCGATTCGGAGACACGGCGGCAAATGCGGGGGTG
ATCACGCTGCTGGACTCGTTCGCAGAGACCAAGATGGCGTCCACTGCCCC
TTCCGCCTCCCCTTCCTCCACGGGTGACCAACCCAAGCCGAACATCGGCG
AGATACTGAAAAAGTCGGGTATGCGCGCCCTGGGAGGTGGGATGGCCGGC
GCGGCTGCCATGGGTATCAACGTGGGGGCATTAATGTGGCTCCGGACCAC
GGTGAACTACCAGTACCGTAAGGTCTACAAGCAAGCCAACGCGGAGCACA
TCACTTACCCCGACGCCGTGAAGCGCATCATTGCTGAGGACGGGCTCATC
GGTCTTTTCGGGCGGGGGCTCAGCACCAAGATTTTTTCCAACGGTAAGTA
AATTCACGGGCCGGGCGTAATGTACCACGGTGCCCTGGCCGCCTTTGCCG
CTAATTTACTAGGGCACTACCCGTGGTTTGCCACCTATAACTACATGCAG
GAGGCCCTGCCCAAGACGGATGACTTCAAGTTGAAGCTGTGCCGTAATGC
TGTCATCGGTTTCAGTGCCTCGGCCATCTCGGACACTGTCTCCAACAGCG
TCCGCGTGGTGAAGGACCTCCCCGTCCTGGTCAAGACGGCCGCTGCCTCG
GCCACTGCCGCCTCCTGGCGCATTTTCCTCATGCCTGTTGATACTTTGAA
GACGATCAAGCAAGTGGAGGGCAAAGATGGCTTCAAGGTGCTCATGGCCA
AGATGAAGGGCACCACCATGCGCGTGGCCCTCAAGACGCTCTACGCCGAC
GGTGGCATTCCCCGCTTTTATCAAGGCCTCCTTCCCGCCCTTGTCCAGGG
ACCGGCCTCTCGATTCGGAGACACGGCGGCAAATGCGGGGGTGATCACGC
TGCTGGACTCGTTCGCAGAGACCAAGATGGCGTCCACTGCCCCTTCCGCC
TCCCCTTCCTCCACGGGTGACCAACCCAAGCCGAACATCGGCGAGATACT
GAAAAAGTCGGGTATGCGCGCCCTGGGAGGTGGGATGGCCGGCGCGGCTG
CCATGGGTATCAACGTGGGGGCATTAATGTGGCTCCGGACCACGGTGAAC
TACCAGTACCGTAAG back to top
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