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Properties
| Property Name | Value |
|---|
| TranscriptId | 604954 |
| Track | FilteredModels2 |
| ProteinId | 604868 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_30 | supercontig | scaffold_30:192367..193859 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9009 ID=mRNA_9009|Name=jgi.p|Nanoce1779_2|604868|organism=Nannochloropsis oceanica|type=mRNA|length=1493bp
CTCCAGACATACTCCAAATTAAAATATCAGTCACAAGCTATAATAGGCTG
TCTGCACAGGCCCCGACTTCATTTGCTGCATAATCTATTTGCCTTCTCTG
GCCTTCATGAGTGCTTGTTGCAAATTTCATTCTCCATTGGAAAATTGGGG
TTTGCTTGGGCCATGCCTGTTGTGTGCTGGCCTCGACCATCACATCTCTC
TTCAACGCCACATCAGGTGTCCTTCCTACCACCTTTACACCTTCCAAAAC
TACTCACACCCACACCACACACATACAGGCATGTCGTCTTCTACTTTCAA
CACCCAGCGCATAAAGTATGGTTCCTTCATTCATCCGCGGTCGGCAAATC
CCGCTCCTGCTCCTCCTCCCAACCTCCCCAGTTGTCTTCGTCCATGGCCC
AACGCGTTCATCTAGCACATTCTCATTCCCATCACACACATCCTATGCTC
GAAAAAGGCAGCATCTTTCTGAGCATCTCAGAAAGAGTCCACAAGCGTCG
TTCTGTCCTTCAACACGGGCTGCATTCGCTCGCGTTCTCGTAGTCACATC
ATCCTAGTCTTACCTGTTTCTCACTTGATCATGGGTGCGCATGAGAGCTC
GGAAGCTGTGCAATTATAGGAAAGCGGTGGCGTTTGTCCATATGTTGAGG
ACTTGTGGGTTGCTCGCAGTCCTTCTCACTTTTCCTATTCGCGACAATAT
TCCCCTCTCACTGAGAAACACGCACACATAGCACACACCCCAGATAGCAC
CTTGCTTTCTGTCAGAAGCGATGCGGCCACAACTTTTCATACCACTCTCA
GAGGTCAAGCCCCCGCAACTTGCACCGCTAATCATCTCATCTTTATCCGC
CCCATCTTCATTCAATTCTGGTTCTGTCCTTTCTTCACATCCCGCGCGCA
AACACACACACACACACGCACAGCTGCACCACATACACAAGCATCTCCTC
TATTTCCGCATGGTACCCACATCCACCACTGAAAATGGTGGCCCGCGCGT
CGCTGACTACTTTCCCCGCCGTCCCAAAGCTTGCCGTGGGGCGGCTGACA
AATTTTTTGCGTGCTTCTCCCTGAAGGGCGAACAGCAAGAGACGGCCCTC
GAAGGCAAAGCAGGTGCGGACAAGGAAGCGGGAAGGAGAGGCCTGGCAGA
ATGCCAAAAGGAAATGAAAGGGTACGACGCGTGCATGTCCAAGGTGTTGA
AGGGGAAGGGGAAGGATGGGCAGGAGAAGTTCTTCCGGGTCCAGGAGGAA
TACCGGTTGGAAAATGTGATGAAGAAGGGGGAGGCTGATGGAGGAAAGCG
GGCGGGTCAGTAACCTTAACGAAAAAAGGAATCGAAAAAGAAGAATGATG
GTTAGATTTATGAAAGGTAGGCGTCGCGAGCCTCGTGGATCGGTTGGATT
CTGTGGTCTGAGACAGGATGTTTGGGGAGGCAATGCCGAGACAGTATATA
CATATATATTAAAGGCGGGGAAGAAGCAGAAAATTCCTTATTA back to topprotein sequence of jgi.p|Nanoce1779_2|604868 >mRNA_9009-protein ID=mRNA_9009-protein|Name=jgi.p|Nanoce1779_2|604868|organism=Nannochloropsis oceanica|type=polypeptide|length=181bp
MRPQLFIPLSEVKPPQLAPLIISSLSAPSSFNSGSVLSSHPARKHTHTHA
QLHHIHKHLLYFRMVPTSTTENGGPRVADYFPRRPKACRGAADKFFACFS
LKGEQQETALEGKAGADKEAGRRGLAECQKEMKGYDACMSKVLKGKGKDG
QEKFFRVQEEYRLENVMKKGEADGGKRAGQ* back to topmRNA from alignment at scaffold_30:192367..193859- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9009 ID=mRNA_9009|Name=jgi.p|Nanoce1779_2|604868|organism=Nannochloropsis oceanica|type=mRNA|length=1493bp|location=Sequence derived from alignment at scaffold_30:192367..193859- (Nannochloropsis oceanica)
CTCCAGACATACTCCAAATTAAAATATCAGTCACAAGCTATAATAGGCTG
TCTGCACAGGCCCCGACTTCATTTGCTGCATAATCTATTTGCCTTCTCTG
GCCTTCATGAGTGCTTGTTGCAAATTTCATTCTCCATTGGAAAATTGGGG
TTTGCTTGGGCCATGCCTGTTGTGTGCTGGCCTCGACCATCACATCTCTC
TTCAACGCCACATCAGGTGTCCTTCCTACCACCTTTACACCTTCCAAAAC
TACTCACACCCACACCACACACATACAGGCATGTCGTCTTCTACTTTCAA
CACCCAGCGCATAAAGTATGGTTCCTTCATTCATCCGCGGTCGGCAAATC
CCGCTCCTGCTCCTCCTCCCAACCTCCCCAGTTGTCTTCGTCCATGGCCC
AACGCGTTCATCTAGCACATTCTCATTCCCATCACACACATCCTATGCTC
GAAAAAGGCAGCATCTTTCTGAGCATCTCAGAAAGAGTCCACAAGCGTCG
TTCTGTCCTTCAACACGGGCTGCATTCGCTCGCGTTCTCGTAGTCACATC
ATCCTAGTCTTACCTGTTTCTCACTTGATCATGGGTGCGCATGAGAGCTC
GGAAGCTGTGCAATTATAGGAAAGCGGTGGCGTTTGTCCATATGTTGAGG
ACTTGTGGGTTGCTCGCAGTCCTTCTCACTTTTCCTATTCGCGACAATAT
TCCCCTCTCACTGAGAAACACGCACACATAGCACACACCCCAGATAGCAC
CTTGCTTTCTGTCAGAAGCGATGCGGCCACAACTTTTCATACCACTCTCA
GAGGTCAAGCCCCCGCAACTTGCACCGCTAATCATCTCATCTTTATCCGC
CCCATCTTCATTCAATTCTGGTTCTGTCCTTTCTTCACATCCCGCGCGCA
AACACACACACACACACGCACAGCTGCACCACATACACAAGCATCTCCTC
TATTTCCGCATGGTACCCACATCCACCACTGAAAATGGTGGCCCGCGCGT
CGCTGACTACTTTCCCCGCCGTCCCAAAGCTTGCCGTGGGGCGGCTGACA
AATTTTTTGCGTGCTTCTCCCTGAAGGGCGAACAGCAAGAGACGGCCCTC
GAAGGCAAAGCAGGTGCGGACAAGGAAGCGGGAAGGAGAGGCCTGGCAGA
ATGCCAAAAGGAAATGAAAGGGTACGACGCGTGCATGTCCAAGGTGTTGA
AGGGGAAGGGGAAGGATGGGCAGGAGAAGTTCTTCCGGGTCCAGGAGGAA
TACCGGTTGGAAAATGTGATGAAGAAGGGGGAGGCTGATGGAGGAAAGCG
GGCGGGTCAGTAACCTTAACGAAAAAAGGAATCGAAAAAGAAGAATGATG
GTTAGATTTATGAAAGGTAGGCGTCGCGAGCCTCGTGGATCGGTTGGATT
CTGTGGTCTGAGACAGGATGTTTGGGGAGGCAATGCCGAGACAGTATATA
CATATATATTAAAGGCGGGGAAGAAGCAGAAAATTCCTTATTA back to topCoding sequence (CDS) from alignment at scaffold_30:192367..193859- >mRNA_9009 ID=mRNA_9009|Name=jgi.p|Nanoce1779_2|604868|organism=Nannochloropsis oceanica|type=CDS|length=543bp|location=Sequence derived from alignment at scaffold_30:192367..193859- (Nannochloropsis oceanica)
ATGCGGCCACAACTTTTCATACCACTCTCAGAGGTCAAGCCCCCGCAACT
TGCACCGCTAATCATCTCATCTTTATCCGCCCCATCTTCATTCAATTCTG
GTTCTGTCCTTTCTTCACATCCCGCGCGCAAACACACACACACACACGCA
CAGCTGCACCACATACACAAGCATCTCCTCTATTTCCGCATGGTACCCAC
ATCCACCACTGAAAATGGTGGCCCGCGCGTCGCTGACTACTTTCCCCGCC
GTCCCAAAGCTTGCCGTGGGGCGGCTGACAAATTTTTTGCGTGCTTCTCC
CTGAAGGGCGAACAGCAAGAGACGGCCCTCGAAGGCAAAGCAGGTGCGGA
CAAGGAAGCGGGAAGGAGAGGCCTGGCAGAATGCCAAAAGGAAATGAAAG
GGTACGACGCGTGCATGTCCAAGGTGTTGAAGGGGAAGGGGAAGGATGGG
CAGGAGAAGTTCTTCCGGGTCCAGGAGGAATACCGGTTGGAAAATGTGAT
GAAGAAGGGGGAGGCTGATGGAGGAAAGCGGGCGGGTCAGTAA back to top
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