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Properties
| Property Name | Value |
|---|
| TranscriptId | 604854 |
| Track | FilteredModels2 |
| ProteinId | 604768 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_30 | supercontig | scaffold_30:95403..96740 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8982 ID=mRNA_8982|Name=jgi.p|Nanoce1779_2|604768|organism=Nannochloropsis oceanica|type=mRNA|length=638bp
GTTGACTACTTCCTTTCCACACTCATCTCGGAATTAGAAGCCGAACAAAT
TCTTTCCATCGAGGACTTGTTTGGCGTCATCCAGAATTACGTACCTGAAA
ATTTGCTGCGCGCGTTGGCCGTGGAAGATGAGGACGACATGGAGGTTCTA
GTGAGCAAGCTCTGGTCCCGCCTTCTCAAAGAAAATGTGATTCCACCTCA
AGAAGACGAGGAGGTGGGAGTCATGGGGTTGGAAAGAAGGGGGGACAAGG
GTTGTGAGTTGTGTGCCCGTGTAATGCCCTTGACGCGGCACCATCTCCGG
CCTCGGACACTGCATAAAAAGCTGCTTAAGCAGGGGATCTCACAAGAGGA
GCTGAATATATGTGCTACAATCTGCAGGCCCTGCCACACGGCTGTGCACC
GAAGCCACGACAACGACACACTGGCCACATTGCTATACACCGTTCCTGCG
TTGTTAGAGGACGAAAAAGTTGGCAAATTTGTGCGATGGGCGAGCAAGCA
ACGAGGACGGGCGCAACAGGATGGTCACAACCAACAGCTTCGCTATCAAC
GCTAATAGATTTGTGCGAAAGGCAAGCAAGCAACGAGGACGGGCGCAACA
GGATGTTCACAACCAACAGCTTCGCTATCAACGCTAAT back to topprotein sequence of jgi.p|Nanoce1779_2|604768 >mRNA_8982-protein ID=mRNA_8982-protein|Name=jgi.p|Nanoce1779_2|604768|organism=Nannochloropsis oceanica|type=polypeptide|length=139bp
MEVLVSKLWSRLLKENVIPPQEDEEVGVMGLERRGDKGCELCARVMPLTR
HHLRPRTLHKKLLKQGISQEELNICATICRPCHTAVHRSHDNDTLATLLY
TVPALLEDEKVGKFVRWASKQRGRAQQDGHNQQLRYQR* back to topmRNA from alignment at scaffold_30:95403..96740- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8982 ID=mRNA_8982|Name=jgi.p|Nanoce1779_2|604768|organism=Nannochloropsis oceanica|type=mRNA|length=1338bp|location=Sequence derived from alignment at scaffold_30:95403..96740- (Nannochloropsis oceanica)
GTTGACTACTTCCTTTCCACACTCATCTCGGAATTAGAAGCCGAACAAAT
TCTTTCCATCGAGGACTTGTTTGGCGTCATCCAGGTAAGATTAAAAATAC
ATATGTATATCTATATACATATATTTCTGTACATATATTTCTCTCTATGT
ACAACGTATTATTCTTTCATGTTTGCACTGTAGTAGAAGTACCGACAGGA
GAGTTTCTACACACCTTGGTGAATAAGATACAACCAAAGAGATAAGATAA
GTGAAGCTAAGAAAACTTATGCGTGTGCATTCCTTACTCACTACAACACA
CATTAGAATTACGTACCTGAAAATTTGCTGCGCGCGTTGGCCGTGGAAGA
TGAGGACGACATGGAGGTAAATGAATCGATATCTTGGCGTGCATGTCGGT
CGTTCAATCTTTGCTGTCGATCGTAAATTCCTTTCGCTTTTCAGCTTCCA
ATTTTTTAAATAAAAATAGATTTACCCTATATTTGAAGTATTTCCCTCGA
GGGTTTACGTACTCCGGGTAATATGCCTGATTTTCAACTGCATATTTTCT
CCTTTTTCTGCCGATACGCCTGATTTGGAATGTTATAAATTACCGATCCT
GATCGATGGCATTTTTTTCTTTTTTTCCTTGTCTTTGTCTCGGTTTTAAC
CTTCAGGTTCTAGTGAGCAAGCTCTGGTCCCGCCTTCTCAAAGAAAATGT
GATTCCACCTCAAGAAGACGAGGAGGTGGGAGTCATGGGGTTGGAAAGAA
GGGGGGACAAGGGTTGTGAGTTGTGTGCCCGTGTAATGCCCTTGACGCGG
CACCATCTCCGGCCTCGGACACTGCATAAAAAGCTGCTTAAGCAGGTAAG
CGAGGGCAAGCGGGGTGACCTGTTGACCGTATTGCAAAGGTGGTATGAGT
GAGGCTGCTGCTTGATTCTCACCTCCACCCGGACATATGTCGTGTTTTTC
ACAGGGGATCTCACAAGAGGAGCTGAATATATGTGCTACAATCTGCAGGT
GAGTCAATAGATGACGGTATGCTTTCATCTCATTCCTTCACTGATCTCCT
ACTGTCCTGCCTTATCCTTCATCCAAGGCCCTGCCACACGGCTGTGCACC
GAAGCCACGACAACGACACACTGGCCACATTGCTATACACCGTTCCTGCG
TTGTTAGAGGACGAAAAAGTTGGCAAATTTGTGCGATGGGCGAGCAAGCA
ACGAGGACGGGCGCAACAGGATGGTCACAACCAACAGCTTCGCTATCAAC
GCTAATAGATTTGTGCGAAAGGCAAGCAAGCAACGAGGACGGGCGCAACA
GGATGTTCACAACCAACAGCTTCGCTATCAACGCTAAT back to topCoding sequence (CDS) from alignment at scaffold_30:95403..96740- >mRNA_8982 ID=mRNA_8982|Name=jgi.p|Nanoce1779_2|604768|organism=Nannochloropsis oceanica|type=CDS|length=1668bp|location=Sequence derived from alignment at scaffold_30:95403..96740- (Nannochloropsis oceanica)
GCCCTGCCACACGGCTGTGCACCGAAGCCACGACAACGACACACTGGCCA
CATTGCTATACACCGTTCCTGCGTTGTTAGAGGACGAAAAAGTTGGCAAA
TTTGTGCGATGGGCGAGCAAGCAACGAGGACGGGCGCAACAGGATGGTCA
CAACCAACAGCTTCGCTATCAACGCTAAGGGATCTCACAAGAGGAGCTGA
ATATATGTGCTACAATCTGCAGGTTCTAGTGAGCAAGCTCTGGTCCCGCC
TTCTCAAAGAAAATGTGATTCCACCTCAAGAAGACGAGGAGGTGGGAGTC
ATGGGGTTGGAAAGAAGGGGGGACAAGGGTTGTGAGTTGTGTGCCCGTGT
AATGCCCTTGACGCGGCACCATCTCCGGCCTCGGACACTGCATAAAAAGC
TGCTTAAGCAGATGGAGGCCCTGCCACACGGCTGTGCACCGAAGCCACGA
CAACGACACACTGGCCACATTGCTATACACCGTTCCTGCGTTGTTAGAGG
ACGAAAAAGTTGGCAAATTTGTGCGATGGGCGAGCAAGCAACGAGGACGG
GCGCAACAGGATGGTCACAACCAACAGCTTCGCTATCAACGCTAAGGGAT
CTCACAAGAGGAGCTGAATATATGTGCTACAATCTGCAGGTTCTAGTGAG
CAAGCTCTGGTCCCGCCTTCTCAAAGAAAATGTGATTCCACCTCAAGAAG
ACGAGGAGGTGGGAGTCATGGGGTTGGAAAGAAGGGGGGACAAGGGTTGT
GAGTTGTGTGCCCGTGTAATGCCCTTGACGCGGCACCATCTCCGGCCTCG
GACACTGCATAAAAAGCTGCTTAAGCAGATGGAGGCCCTGCCACACGGCT
GTGCACCGAAGCCACGACAACGACACACTGGCCACATTGCTATACACCGT
TCCTGCGTTGTTAGAGGACGAAAAAGTTGGCAAATTTGTGCGATGGGCGA
GCAAGCAACGAGGACGGGCGCAACAGGATGGTCACAACCAACAGCTTCGC
TATCAACGCTAAGGGATCTCACAAGAGGAGCTGAATATATGTGCTACAAT
CTGCAGGTTCTAGTGAGCAAGCTCTGGTCCCGCCTTCTCAAAGAAAATGT
GATTCCACCTCAAGAAGACGAGGAGGTGGGAGTCATGGGGTTGGAAAGAA
GGGGGGACAAGGGTTGTGAGTTGTGTGCCCGTGTAATGCCCTTGACGCGG
CACCATCTCCGGCCTCGGACACTGCATAAAAAGCTGCTTAAGCAGATGGA
GGCCCTGCCACACGGCTGTGCACCGAAGCCACGACAACGACACACTGGCC
ACATTGCTATACACCGTTCCTGCGTTGTTAGAGGACGAAAAAGTTGGCAA
ATTTGTGCGATGGGCGAGCAAGCAACGAGGACGGGCGCAACAGGATGGTC
ACAACCAACAGCTTCGCTATCAACGCTAAGGGATCTCACAAGAGGAGCTG
AATATATGTGCTACAATCTGCAGGTTCTAGTGAGCAAGCTCTGGTCCCGC
CTTCTCAAAGAAAATGTGATTCCACCTCAAGAAGACGAGGAGGTGGGAGT
CATGGGGTTGGAAAGAAGGGGGGACAAGGGTTGTGAGTTGTGTGCCCGTG
TAATGCCCTTGACGCGGCACCATCTCCGGCCTCGGACACTGCATAAAAAG
CTGCTTAAGCAGATGGAG back to top
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