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Properties
| Property Name | Value |
|---|
| TranscriptId | 145769 |
| Track | FilteredModels2 |
| ProteinId | 145683 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:687154..690016 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_898 ID=mRNA_898|Name=jgi.p|Nanoce1779_2|145683|organism=Nannochloropsis oceanica|type=mRNA|length=2634bp
CATCGACTCGAGGATCGCTCCACCTTCCTCCTCTTCGAGCCCAATCTTGC
TGGTCGTAAATGTCTCGATGCTCATGGCAGTTGGTAGGACCTCCAAGGCA
AAATGACGCTTTGTGCTGTTGTTGGTCACCGCTTCTGCCATTCTGCTGCT
GCTTACCCTACTATAGGAAAACTTCCCTACGCATAGAACATGCCATTGGA
CTTGTCGTCAAGAAGACAGGGGCAGCCGCTGCCCTATCTACTGCTGGCCA
CCGCTGTCGTCATCGTCTCCTCTTCTCCGACTGTCGTGCTGGCCTCCACA
GCATCATCACCATCACGACATTGTTGGGGCACCACAGTCCTGCGGCAGAA
CATATATAGTCATGGGGGATTTGTTTTCCCATCAAAACTGCTCAGAGAAT
CACGTCCGGCAGGCACGATTGTCTCTCTCTCCTCTCCTTCCCACTCACGA
TTGTTCTTGGGCCGCCGCGGGGGGGCCGTCCCTTCCACCACCGTCCCTTC
CACCACCGTTCCTGCAGCGGCTGCAGGTCGCGTGACGACGACAGCAGCTG
CTGCCACGGGCACTTCTTCCTCTTCTTCCTCGCCTCCTACGGCCATCAAA
CTGGGGTCAGCCTCGACGCGAGAGGTCGAGCTGTTCGAGATGCTGATGGG
CTTGGGGCAAGACCACCTCTTCCAAAACTGGCCGGCCGCAGGGGAGGCAG
AGGATGCAAAACACGCTTTCTTTCAGCAGGTGCAGCAGTTAGATGAGAGC
TACCCAGGTGGTGTTGTAGCTTATGTCAAGAAAGCTCGGGCCTTGCTAGG
GGCTGCTGTGAGGCAGGAAAACCCTTTTGAGGGTGTGACACCCTCTGTAC
CTGACGGGGAGACACTAGCGTACGGGACGGCCGAATTTGCCGCGGCGGAA
GAAAGGGGATTGGACGAGGTGGCACATGCGGTCTTTGTCTTGGTGGCGGG
TGGATTAGGAGAGCGTTTAGGGTATGGAGGGATCAAACTTGCGTTGCCTG
TTGAGTCGACGACGGGGGAGACGTACCTGGAGTTTTATGCGAGTTATATT
TTGGCGTTGCAGGCACGCGCTCGGCAACGGACTGGCGATGCATCTTTGAT
CTTGCCTTTAGCCATTATGACTTCCGATGACACAGACGCGCAGACCCGGG
AGTTGTTGCTGCGCAATGGCAATTTCGGGATGGCAGAGGGGCAGGTGGTG
ATTGTCAAGCAGAGCAAGGTCCCGGCCTTGCAAGACTCGGAGGCCCGCCT
GACCTTGGCTGATCCTTATACCCTCGACACCAAACCGCACGGACACGGTG
ACGTCCACCATCTCTTGCTCCGTAGCGGTCTGACCGCGCAGTGGCTAGCT
GAAGGCCGCAAATGGGTATTTTTTATGCAGGATACCAATGCCCTGGTCGT
TAATTCCATCCTCCCTGCCCTGGCCGTGAGCGCCACCAAGGGGTACGACA
TGAATAGCATCTGTATCCCCCGTAAGGCTGGGGAGGCTTCCGGCGCCATC
ACCAAGCTGACCAGCCGGTCGGGTGACGCTATAATTATCAATGTGGAATA
CAACCAGCTCGACCCCCTGTTACGTGCCACCACCTTCCCGGAAGGCGATA
CCAATGACCCTTCCTCAGGCTGCTCCCCATTCCCTGGCAACGCCAATAAT
ATCGTCATGTCCCTCCCTTCCTACCACCGCGTCCTCCAAGGAGTCGACCA
AGGAGTCGTCGAAGAATTCGTCAATCCCAAATTTAAAGATAGCACCCGCA
CGGCATTCACCAAACCCACCCGGCTCGAATGCATGATGCAAGACTTTCCC
AAGCTCCTGGCAAAGGAAATGGGGTCCACAGCCAGGGTTGGATTCACGAG
CTTCGAAAAATGGCTCTCGTTCTCCCCGGCCAAAAACAGTCTGGATGCCG
GGGCCAAGGCATACGCAGCTACAGGTGTGCCCCCCGCGACGGCCTCCAGT
GCGGAGATGGACTTTTACCGGTCGCATTTGCTTAAACTGCGCGCAGCCTT
GTCAGCTTCCGCTGCTGCAGATGGTCTGAAATACGGCCAGGTGGAGACGT
TCGCTGATATTCCTTTGGAGACTGGACCTCGGGTTGTGTTGACCCCTGCG
CTGGCAGTGACAACCCGGGAGTTGCAGGAGAAGTTTGGCGGGAGGATAAG
AGTGTCAGGAAGGAGCACGCTGGTATTGGACGGTAAGGGTATTCGTATTG
AAGCGCTGGATTTGGACGGGACCTTGGTTGTGAAGGCGGGGCCGAGGGCG
AAGGTAGTTGTGAAGGATGCGGTGGTGAGGAATGAGGGGTGGAAATTGGT
GGCGACGGGAGAGGAGGCGGTGGAAGAGGAAAGAATCAGAGGCTTTCTTA
TTGAGAAGGAGGGAGGGGTTGTGATTGACTTGGGGGAGGCGGAGGGGGAT
TTTGTGGTGACGGGAAATGGGGAAGTAGTGAAACAGTGAGAGAGTATGAG
GAGGTGGAGCTGGGCGAGGAATGCCATGAGCAATAGGTAACGAGGTATGT
TTGTGAGTCGTGTACGAAATGAAGTAGCTGTGTCAAGACCCTGCTGGACA
CGACGGGAAAGGAAGGCACATTTGAAACCAAGTAATAACTATAGAATTAA
ACGCGTGTTTCATTTCGCTAAAGCCCGCACCGTT back to topprotein sequence of jgi.p|Nanoce1779_2|145683 >mRNA_898-protein ID=mRNA_898-protein|Name=jgi.p|Nanoce1779_2|145683|organism=Nannochloropsis oceanica|type=polypeptide|length=750bp
MPLDLSSRRQGQPLPYLLLATAVVIVSSSPTVVLASTASSPSRHCWGTTV
LRQNIYSHGGFVFPSKLLRESRPAGTIVSLSSPSHSRLFLGRRGGAVPST
TVPSTTVPAAAAGRVTTTAAAATGTSSSSSSPPTAIKLGSASTREVELFE
MLMGLGQDHLFQNWPAAGEAEDAKHAFFQQVQQLDESYPGGVVAYVKKAR
ALLGAAVRQENPFEGVTPSVPDGETLAYGTAEFAAAEERGLDEVAHAVFV
LVAGGLGERLGYGGIKLALPVESTTGETYLEFYASYILALQARARQRTGD
ASLILPLAIMTSDDTDAQTRELLLRNGNFGMAEGQVVIVKQSKVPALQDS
EARLTLADPYTLDTKPHGHGDVHHLLLRSGLTAQWLAEGRKWVFFMQDTN
ALVVNSILPALAVSATKGYDMNSICIPRKAGEASGAITKLTSRSGDAIII
NVEYNQLDPLLRATTFPEGDTNDPSSGCSPFPGNANNIVMSLPSYHRVLQ
GVDQGVVEEFVNPKFKDSTRTAFTKPTRLECMMQDFPKLLAKEMGSTARV
GFTSFEKWLSFSPAKNSLDAGAKAYAATGVPPATASSAEMDFYRSHLLKL
RAALSASAAADGLKYGQVETFADIPLETGPRVVLTPALAVTTRELQEKFG
GRIRVSGRSTLVLDGKGIRIEALDLDGTLVVKAGPRAKVVVKDAVVRNEG
WKLVATGEEAVEEERIRGFLIEKEGGVVIDLGEAEGDFVVTGNGEVVKQ* back to topmRNA from alignment at scaffold_2:687154..690016+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_898 ID=mRNA_898|Name=jgi.p|Nanoce1779_2|145683|organism=Nannochloropsis oceanica|type=mRNA|length=2863bp|location=Sequence derived from alignment at scaffold_2:687154..690016+ (Nannochloropsis oceanica)
CATCGACTCGAGGATCGCTCCACCTTCCTCCTCTTCGAGCCCAATCTTGC
TGGTCGTAAATGTCTCGATGCTCATGGCAGTTGGTAGGACCTCCAAGGCA
AAATGACGCTTTGTGCTGTTGTTGGTCACCGCTTCTGCCATTCTGCTGCT
GCTTACCCTACTATAGGAAAACTTCCCTACGCATGTACGTTTGGATCAAA
CTGTCAAAGAAGGCAACATGTTCACCCCTGCATTGTTTCTGTTCTTTAAA
GGCTGGAATAGTGTTGAGTAAACCGCGAGGGAAGCCTGTGTGGCCCATTC
AGCGATATGCGATGACGGATTCGGACTTCTTTCTTCAACGCCGAGCCAAA
GCCAAAATCGAAACATTACGCTCTCCTGCATCCTTTCCGCTCTCACCTTA
TTACCAAACATAGAGAACATGCCATTGGACTTGTCGTCAAGAAGACAGGG
GCAGCCGCTGCCCTATCTACTGCTGGCCACCGCTGTCGTCATCGTCTCCT
CTTCTCCGACTGTCGTGCTGGCCTCCACAGCATCATCACCATCACGACAT
TGTTGGGGCACCACAGTCCTGCGGCAGAACATATATAGTCATGGGGGATT
TGTTTTCCCATCAAAACTGCTCAGAGAATCACGTCCGGCAGGCACGATTG
TCTCTCTCTCCTCTCCTTCCCACTCACGATTGTTCTTGGGCCGCCGCGGG
GGGGCCGTCCCTTCCACCACCGTCCCTTCCACCACCGTTCCTGCAGCGGC
TGCAGGTCGCGTGACGACGACAGCAGCTGCTGCCACGGGCACTTCTTCCT
CTTCTTCCTCGCCTCCTACGGCCATCAAACTGGGGTCAGCCTCGACGCGA
GAGGTCGAGCTGTTCGAGATGCTGATGGGCTTGGGGCAAGACCACCTCTT
CCAAAACTGGCCGGCCGCAGGGGAGGCAGAGGATGCAAAACACGCTTTCT
TTCAGCAGGTGCAGCAGTTAGATGAGAGCTACCCAGGTGGTGTTGTAGCT
TATGTCAAGAAAGCTCGGGCCTTGCTAGGGGCTGCTGTGAGGCAGGAAAA
CCCTTTTGAGGGTGTGACACCCTCTGTACCTGACGGGGAGACACTAGCGT
ACGGGACGGCCGAATTTGCCGCGGCGGAAGAAAGGGGATTGGACGAGGTG
GCACATGCGGTCTTTGTCTTGGTGGCGGGTGGATTAGGAGAGCGTTTAGG
GTATGGAGGGATCAAACTTGCGTTGCCTGTTGAGTCGACGACGGGGGAGA
CGTACCTGGAGTTTTATGCGAGTTATATTTTGGCGTTGCAGGCACGCGCT
CGGCAACGGACTGGCGATGCATCTTTGATCTTGCCTTTAGCCATTATGAC
TTCCGATGACACAGACGCGCAGACCCGGGAGTTGTTGCTGCGCAATGGCA
ATTTCGGGATGGCAGAGGGGCAGGTGGTGATTGTCAAGCAGAGCAAGGTC
CCGGCCTTGCAAGACTCGGAGGCCCGCCTGACCTTGGCTGATCCTTATAC
CCTCGACACCAAACCGCACGGACACGGTGACGTCCACCATCTCTTGCTCC
GTAGCGGTCTGACCGCGCAGTGGCTAGCTGAAGGCCGCAAATGGGTATTT
TTTATGCAGGATACCAATGCCCTGGTCGTTAATTCCATCCTCCCTGCCCT
GGCCGTGAGCGCCACCAAGGGGTACGACATGAATAGCATCTGTATCCCCC
GTAAGGCTGGGGAGGCTTCCGGCGCCATCACCAAGCTGACCAGCCGGTCG
GGTGACGCTATAATTATCAATGTGGAATACAACCAGCTCGACCCCCTGTT
ACGTGCCACCACCTTCCCGGAAGGCGATACCAATGACCCTTCCTCAGGCT
GCTCCCCATTCCCTGGCAACGCCAATAATATCGTCATGTCCCTCCCTTCC
TACCACCGCGTCCTCCAAGGAGTCGACCAAGGAGTCGTCGAAGAATTCGT
CAATCCCAAATTTAAAGATAGCACCCGCACGGCATTCACCAAACCCACCC
GGCTCGAATGCATGATGCAAGACTTTCCCAAGCTCCTGGCAAAGGAAATG
GGGTCCACAGCCAGGGTTGGATTCACGAGCTTCGAAAAATGGCTCTCGTT
CTCCCCGGCCAAAAACAGTCTGGATGCCGGGGCCAAGGCATACGCAGCTA
CAGGTGTGCCCCCCGCGACGGCCTCCAGTGCGGAGATGGACTTTTACCGG
TCGCATTTGCTTAAACTGCGCGCAGCCTTGTCAGCTTCCGCTGCTGCAGA
TGGTCTGAAATACGGCCAGGTGGAGACGTTCGCTGATATTCCTTTGGAGA
CTGGACCTCGGGTTGTGTTGACCCCTGCGCTGGCAGTGACAACCCGGGAG
TTGCAGGAGAAGTTTGGCGGGAGGATAAGAGTGTCAGGAAGGAGCACGCT
GGTATTGGACGGTAAGGGTATTCGTATTGAAGCGCTGGATTTGGACGGGA
CCTTGGTTGTGAAGGCGGGGCCGAGGGCGAAGGTAGTTGTGAAGGATGCG
GTGGTGAGGAATGAGGGGTGGAAATTGGTGGCGACGGGAGAGGAGGCGGT
GGAAGAGGAAAGAATCAGAGGCTTTCTTATTGAGAAGGAGGGAGGGGTTG
TGATTGACTTGGGGGAGGCGGAGGGGGATTTTGTGGTGACGGGAAATGGG
GAAGTAGTGAAACAGTGAGAGAGTATGAGGAGGTGGAGCTGGGCGAGGAA
TGCCATGAGCAATAGGTAACGAGGTATGTTTGTGAGTCGTGTACGAAATG
AAGTAGCTGTGTCAAGACCCTGCTGGACACGACGGGAAAGGAAGGCACAT
TTGAAACCAAGTAATAACTATAGAATTAAACGCGTGTTTCATTTCGCTAA
AGCCCGCACCGTT back to topCoding sequence (CDS) from alignment at scaffold_2:687154..690016+ >mRNA_898 ID=mRNA_898|Name=jgi.p|Nanoce1779_2|145683|organism=Nannochloropsis oceanica|type=CDS|length=2250bp|location=Sequence derived from alignment at scaffold_2:687154..690016+ (Nannochloropsis oceanica)
ATGCCATTGGACTTGTCGTCAAGAAGACAGGGGCAGCCGCTGCCCTATCT
ACTGCTGGCCACCGCTGTCGTCATCGTCTCCTCTTCTCCGACTGTCGTGC
TGGCCTCCACAGCATCATCACCATCACGACATTGTTGGGGCACCACAGTC
CTGCGGCAGAACATATATAGTCATGGGGGATTTGTTTTCCCATCAAAACT
GCTCAGAGAATCACGTCCGGCAGGCACGATTGTCTCTCTCTCCTCTCCTT
CCCACTCACGATTGTTCTTGGGCCGCCGCGGGGGGGCCGTCCCTTCCACC
ACCGTCCCTTCCACCACCGTTCCTGCAGCGGCTGCAGGTCGCGTGACGAC
GACAGCAGCTGCTGCCACGGGCACTTCTTCCTCTTCTTCCTCGCCTCCTA
CGGCCATCAAACTGGGGTCAGCCTCGACGCGAGAGGTCGAGCTGTTCGAG
ATGCTGATGGGCTTGGGGCAAGACCACCTCTTCCAAAACTGGCCGGCCGC
AGGGGAGGCAGAGGATGCAAAACACGCTTTCTTTCAGCAGGTGCAGCAGT
TAGATGAGAGCTACCCAGGTGGTGTTGTAGCTTATGTCAAGAAAGCTCGG
GCCTTGCTAGGGGCTGCTGTGAGGCAGGAAAACCCTTTTGAGGGTGTGAC
ACCCTCTGTACCTGACGGGGAGACACTAGCGTACGGGACGGCCGAATTTG
CCGCGGCGGAAGAAAGGGGATTGGACGAGGTGGCACATGCGGTCTTTGTC
TTGGTGGCGGGTGGATTAGGAGAGCGTTTAGGGTATGGAGGGATCAAACT
TGCGTTGCCTGTTGAGTCGACGACGGGGGAGACGTACCTGGAGTTTTATG
CGAGTTATATTTTGGCGTTGCAGGCACGCGCTCGGCAACGGACTGGCGAT
GCATCTTTGATCTTGCCTTTAGCCATTATGACTTCCGATGACACAGACGC
GCAGACCCGGGAGTTGTTGCTGCGCAATGGCAATTTCGGGATGGCAGAGG
GGCAGGTGGTGATTGTCAAGCAGAGCAAGGTCCCGGCCTTGCAAGACTCG
GAGGCCCGCCTGACCTTGGCTGATCCTTATACCCTCGACACCAAACCGCA
CGGACACGGTGACGTCCACCATCTCTTGCTCCGTAGCGGTCTGACCGCGC
AGTGGCTAGCTGAAGGCCGCAAATGGGTATTTTTTATGCAGGATACCAAT
GCCCTGGTCGTTAATTCCATCCTCCCTGCCCTGGCCGTGAGCGCCACCAA
GGGGTACGACATGAATAGCATCTGTATCCCCCGTAAGGCTGGGGAGGCTT
CCGGCGCCATCACCAAGCTGACCAGCCGGTCGGGTGACGCTATAATTATC
AATGTGGAATACAACCAGCTCGACCCCCTGTTACGTGCCACCACCTTCCC
GGAAGGCGATACCAATGACCCTTCCTCAGGCTGCTCCCCATTCCCTGGCA
ACGCCAATAATATCGTCATGTCCCTCCCTTCCTACCACCGCGTCCTCCAA
GGAGTCGACCAAGGAGTCGTCGAAGAATTCGTCAATCCCAAATTTAAAGA
TAGCACCCGCACGGCATTCACCAAACCCACCCGGCTCGAATGCATGATGC
AAGACTTTCCCAAGCTCCTGGCAAAGGAAATGGGGTCCACAGCCAGGGTT
GGATTCACGAGCTTCGAAAAATGGCTCTCGTTCTCCCCGGCCAAAAACAG
TCTGGATGCCGGGGCCAAGGCATACGCAGCTACAGGTGTGCCCCCCGCGA
CGGCCTCCAGTGCGGAGATGGACTTTTACCGGTCGCATTTGCTTAAACTG
CGCGCAGCCTTGTCAGCTTCCGCTGCTGCAGATGGTCTGAAATACGGCCA
GGTGGAGACGTTCGCTGATATTCCTTTGGAGACTGGACCTCGGGTTGTGT
TGACCCCTGCGCTGGCAGTGACAACCCGGGAGTTGCAGGAGAAGTTTGGC
GGGAGGATAAGAGTGTCAGGAAGGAGCACGCTGGTATTGGACGGTAAGGG
TATTCGTATTGAAGCGCTGGATTTGGACGGGACCTTGGTTGTGAAGGCGG
GGCCGAGGGCGAAGGTAGTTGTGAAGGATGCGGTGGTGAGGAATGAGGGG
TGGAAATTGGTGGCGACGGGAGAGGAGGCGGTGGAAGAGGAAAGAATCAG
AGGCTTTCTTATTGAGAAGGAGGGAGGGGTTGTGATTGACTTGGGGGAGG
CGGAGGGGGATTTTGTGGTGACGGGAAATGGGGAAGTAGTGAAACAGTGA back to top
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