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Properties
| Property Name | Value |
|---|
| TranscriptId | 533180 |
| Track | FilteredModels2 |
| ProteinId | 533094 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_30 | supercontig | scaffold_30:67114..69228 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8975 ID=mRNA_8975|Name=jgi.p|Nanoce1779_2|533094|organism=Nannochloropsis oceanica|type=mRNA|length=993bp
ATGACAACCGCCGTGTGCTTTGACTTCGACGGCACTTTGGGGGATACGGA
ATCTCCTGCCATGGAGGTGGCCTTTTGGGAGGTGGCTGCCTACTTGCCCA
GCCTGCCCGTTGATGACCCTGCCGCCCTCCAGTCGTTCAAGCAGGAGTTC
ATCGAGAACAACGCTGGCCGAGCTTTCGAATTCATGGTCGAGGACATCAA
CAAGGAGCGAGAGGGCAAGGGGCTGTCGACGGTGGAGGAGGCCTGGAGCG
TCCTGCCCTCGGACCCCAAGATTCTCTCTCTGGTGGACGCCGCGCGGGCC
AAGTTCCAGCTGAAGCCTCTGACGGACGTGCTGGCTGCGCAGAGCTTCCC
CTCCATCTTTACCATGCAGAAGGAGGAGACGAATATGGCACTGGCTGTCG
CGACGAAGGCCTGTGACGGGGTCCTGGACGTATGTAACCTCTTAACCAAA
GAAGGCACTCCCTTCTGCATCGCCACCACCAGCCCCAAGCCGCGTGTGCC
GATCTCGGTCAAGGCCGCCAGCCTCGAACCCTTTTTCCCCCCGGAGAAAA
TCCATTCAGGCGAGTCTGATTTCGACCCTCCTCGCTTTAAACCTGCCCCG
GACGTGTACCTCAAGGCAGCTGCTGCGGAGAAATGCGACCCGGAAGACTG
CATTGCCGTTGAAGACTCGGGCTCGGGTGTGGGGTCGGCGGCCAACGCCA
GGATGGGCTTGATTATTGGATATGTAGGCGCGAGTCATATTCCTGCGGGT
AAGAAAGAGAGCCATGCCAAGATGTTAATGGCGGGGGAGAAGAGCGAGGA
CGGACGGGGGGCGCTGTTGGTGGTGGAGGAGTTCCGGAACGTGGCTGTGT
TGGTTAATGCCTTCAAGGCCGCTCGGGCTAAGGGAGATGGGAAGGGTGGG
AAGCCCGGTGCATTTGCCTTTGGGGAGGACGTGATTCAAGGGCTGAAGGG
GCGAGTGTGGCTGCCGGAGGGAAAGGTGCTCGTGAACAACTAG back to topprotein sequence of jgi.p|Nanoce1779_2|533094 >mRNA_8975-protein ID=mRNA_8975-protein|Name=jgi.p|Nanoce1779_2|533094|organism=Nannochloropsis oceanica|type=polypeptide|length=331bp
MTTAVCFDFDGTLGDTESPAMEVAFWEVAAYLPSLPVDDPAALQSFKQEF
IENNAGRAFEFMVEDINKEREGKGLSTVEEAWSVLPSDPKILSLVDAARA
KFQLKPLTDVLAAQSFPSIFTMQKEETNMALAVATKACDGVLDVCNLLTK
EGTPFCIATTSPKPRVPISVKAASLEPFFPPEKIHSGESDFDPPRFKPAP
DVYLKAAAAEKCDPEDCIAVEDSGSGVGSAANARMGLIIGYVGASHIPAG
KKESHAKMLMAGEKSEDGRGALLVVEEFRNVAVLVNAFKAARAKGDGKGG
KPGAFAFGEDVIQGLKGRVWLPEGKVLVNN* back to topmRNA from alignment at scaffold_30:67114..69228- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8975 ID=mRNA_8975|Name=jgi.p|Nanoce1779_2|533094|organism=Nannochloropsis oceanica|type=mRNA|length=2115bp|location=Sequence derived from alignment at scaffold_30:67114..69228- (Nannochloropsis oceanica)
ATGACAACCGCCGTGTGCTTTGACTTCGACGGCACTTTGGGGGATACGGA
ATCTCCTGCCATGGAGGTGGCCTTTTGGGAGGTGGCTGCCTACTTGCCCA
GCCTGCCCGTTGGTAAGGAGGGAGGGAGGGAAGGGGGGAAGCAAGGAAGA
GTCTTGCAGTGGCTGCGAGTCGTCTAAACCTTCTTTTTCTTTTTCTCTTT
CCTTTTTTCTTTGGACGGACGACTTGGAGGCACCCTTGTGCTGTACAGCA
GGAGGCCTTTCTACTGATCCAATAATGGAAAGAAGCCTCTGTTATGAAGC
TGTCTTAATCCCTCTCTCCCCCCTCCCTCCCTCGCTAGATGACCCTGCCG
CCCTCCAGTCGTTCAAGCAGGAGTTCATCGAGAACAACGCTGGCCGAGCT
TTCGAATTCATGGTCGAGGACATCAACAAGGTATAGAGGGAGGGAGAGAT
GGAAAGAGGGAGTTAATTTTTTCACGGGAAGGAGCAACAGTAGTAGTAGA
GGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGGAGGGGGGGGTTAAAT
TTATGAAGAATGTACACCCTGCTCTCTCTCCCTTCCAAGGTTTATGTAGA
ACATGCCAAAAATCGCCCAATCAATCATTCATTTGTTTATTTGTCCTTTT
CTTTATTCATTTATTCATGTGACTGAACCCTGACGCAGGAGCGAGAGGGC
AAGGGGCTGTCGACGGTGGAGGAGGCCTGGAGCGGTACGTCACAGAGAGA
GGAAGGAAGGGAGGGAGGGAGGGAGGAAGAATTAAGACGATAACAGACAT
GGACATGGCATGTAGACTGATAACTAGGTTGTAGGCACGTTCTCCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
TCTTCCCTCGGACGCCAAGACCATTTCCCCCGTGGACGCCGCCCAGGACA
ATTTCTCATCATACTCACTCACCCCTCCCTCCCTCCCGCCCTCCCTCCCT
CGCTTCCTCAGTCCTGCCCTCGGACCCCAAGATTCTCTCTCTGGTGGACG
CCGCGCGGGCCAAGTTCCAGCTGAAGCCTCTGACGGACGTGCTGGCTGCG
CAGAGCTTCCCCTCCATCTTTACCATGCAGAAGGAGGAGACGAATATGGC
ACTGGCTGTCGCGACGAAGGCCTGTGACGGGGTATGTCCTCCCTCCTTTC
CTCCCTCCTTTCCTCCCTCCTTTTCTTCCTCCCTTTTTCCATGCCTCCCT
CCTTCTCTTCCTTCCCCACCCCAACTCCGCTGACCATTCTCCTCCCTCCC
TCTCTATCTCCCCCCCCTCCCTCCCAGGTCCTGGACGTATGTAACCTCTT
AACCAAAGAAGGCACTCCCTTCTGCATCGCCACCACCAGCCCCAAGCCGC
GTGTGCCGATCTCGGTCAAGGCCGCCAGCCTCGAACCCTTTTTCCCCCCG
GAGAAAATCCATTCAGGCGAGTCTGATTTCGACCCTCCTCGGTACGTGCC
TCCCCTCTCTCCCTCCCTCCCTCTCTCCCTTCCTCCCTTCCTCTCTCTCT
ACCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCACCGTCTTGGCAACTAGGAGTAGCCATATTCCTTCCGCC
ATCTCACCTCTCCCTCCCTCCCTCCCGCCCTCCCTCCCTCCCTGGTACGT
CCCCAGCTTTAAACCTGCCCCGGACGTGTACCTCAAGGCAGCTGCTGCGG
AGAAATGCGACCCGGAAGACTGCATTGCCGTTGAAGACTCGGGCTCGGGT
GTGGGGTCGGCGGCCAACGCCAGGATGGGCTTGATTATTGGATATGTAGG
CGCGAGTCATATTCCTGCGGGTAAGAAAGAGAGCCATGCCAAGATGTTAA
TGGCGGGGGAGAAGAGCGAGGACGGACGGGGGGCGCTGTTGGTGGTGGAG
GAGTTCCGGAACGTGGCTGTGTTGGTTAATGCCTTCAAGGCCGCTCGGGC
TAAGGGAGATGGGAAGGGTGGGAAGCCCGGTGCATTTGCCTTTGGGGAGG
ACGTGATTCAAGGGCTGAAGGGGCGAGTGTGGCTGCCGGAGGGAAAGGTG
CTCGTGAACAACTAG back to topCoding sequence (CDS) from alignment at scaffold_30:67114..69228- >mRNA_8975 ID=mRNA_8975|Name=jgi.p|Nanoce1779_2|533094|organism=Nannochloropsis oceanica|type=CDS|length=5958bp|location=Sequence derived from alignment at scaffold_30:67114..69228- (Nannochloropsis oceanica)
CTTTAAACCTGCCCCGGACGTGTACCTCAAGGCAGCTGCTGCGGAGAAAT
GCGACCCGGAAGACTGCATTGCCGTTGAAGACTCGGGCTCGGGTGTGGGG
TCGGCGGCCAACGCCAGGATGGGCTTGATTATTGGATATGTAGGCGCGAG
TCATATTCCTGCGGGTAAGAAAGAGAGCCATGCCAAGATGTTAATGGCGG
GGGAGAAGAGCGAGGACGGACGGGGGGCGCTGTTGGTGGTGGAGGAGTTC
CGGAACGTGGCTGTGTTGGTTAATGCCTTCAAGGCCGCTCGGGCTAAGGG
AGATGGGAAGGGTGGGAAGCCCGGTGCATTTGCCTTTGGGGAGGACGTGA
TTCAAGGGCTGAAGGGGCGAGTGTGGCTGCCGGAGGGAAAGGTGCTCGTG
AACAACTAGGTCCTGGACGTATGTAACCTCTTAACCAAAGAAGGCACTCC
CTTCTGCATCGCCACCACCAGCCCCAAGCCGCGTGTGCCGATCTCGGTCA
AGGCCGCCAGCCTCGAACCCTTTTTCCCCCCGGAGAAAATCCATTCAGGC
GAGTCTGATTTCGACCCTCCTCGTCCTGCCCTCGGACCCCAAGATTCTCT
CTCTGGTGGACGCCGCGCGGGCCAAGTTCCAGCTGAAGCCTCTGACGGAC
GTGCTGGCTGCGCAGAGCTTCCCCTCCATCTTTACCATGCAGAAGGAGGA
GACGAATATGGCACTGGCTGTCGCGACGAAGGCCTGTGACGGGGAGCGAG
AGGGCAAGGGGCTGTCGACGGTGGAGGAGGCCTGGAGCGATGACCCTGCC
GCCCTCCAGTCGTTCAAGCAGGAGTTCATCGAGAACAACGCTGGCCGAGC
TTTCGAATTCATGGTCGAGGACATCAACAAGATGACAACCGCCGTGTGCT
TTGACTTCGACGGCACTTTGGGGGATACGGAATCTCCTGCCATGGAGGTG
GCCTTTTGGGAGGTGGCTGCCTACTTGCCCAGCCTGCCCGTTGCTTTAAA
CCTGCCCCGGACGTGTACCTCAAGGCAGCTGCTGCGGAGAAATGCGACCC
GGAAGACTGCATTGCCGTTGAAGACTCGGGCTCGGGTGTGGGGTCGGCGG
CCAACGCCAGGATGGGCTTGATTATTGGATATGTAGGCGCGAGTCATATT
CCTGCGGGTAAGAAAGAGAGCCATGCCAAGATGTTAATGGCGGGGGAGAA
GAGCGAGGACGGACGGGGGGCGCTGTTGGTGGTGGAGGAGTTCCGGAACG
TGGCTGTGTTGGTTAATGCCTTCAAGGCCGCTCGGGCTAAGGGAGATGGG
AAGGGTGGGAAGCCCGGTGCATTTGCCTTTGGGGAGGACGTGATTCAAGG
GCTGAAGGGGCGAGTGTGGCTGCCGGAGGGAAAGGTGCTCGTGAACAACT
AGGTCCTGGACGTATGTAACCTCTTAACCAAAGAAGGCACTCCCTTCTGC
ATCGCCACCACCAGCCCCAAGCCGCGTGTGCCGATCTCGGTCAAGGCCGC
CAGCCTCGAACCCTTTTTCCCCCCGGAGAAAATCCATTCAGGCGAGTCTG
ATTTCGACCCTCCTCGTCCTGCCCTCGGACCCCAAGATTCTCTCTCTGGT
GGACGCCGCGCGGGCCAAGTTCCAGCTGAAGCCTCTGACGGACGTGCTGG
CTGCGCAGAGCTTCCCCTCCATCTTTACCATGCAGAAGGAGGAGACGAAT
ATGGCACTGGCTGTCGCGACGAAGGCCTGTGACGGGGAGCGAGAGGGCAA
GGGGCTGTCGACGGTGGAGGAGGCCTGGAGCGATGACCCTGCCGCCCTCC
AGTCGTTCAAGCAGGAGTTCATCGAGAACAACGCTGGCCGAGCTTTCGAA
TTCATGGTCGAGGACATCAACAAGATGACAACCGCCGTGTGCTTTGACTT
CGACGGCACTTTGGGGGATACGGAATCTCCTGCCATGGAGGTGGCCTTTT
GGGAGGTGGCTGCCTACTTGCCCAGCCTGCCCGTTGCTTTAAACCTGCCC
CGGACGTGTACCTCAAGGCAGCTGCTGCGGAGAAATGCGACCCGGAAGAC
TGCATTGCCGTTGAAGACTCGGGCTCGGGTGTGGGGTCGGCGGCCAACGC
CAGGATGGGCTTGATTATTGGATATGTAGGCGCGAGTCATATTCCTGCGG
GTAAGAAAGAGAGCCATGCCAAGATGTTAATGGCGGGGGAGAAGAGCGAG
GACGGACGGGGGGCGCTGTTGGTGGTGGAGGAGTTCCGGAACGTGGCTGT
GTTGGTTAATGCCTTCAAGGCCGCTCGGGCTAAGGGAGATGGGAAGGGTG
GGAAGCCCGGTGCATTTGCCTTTGGGGAGGACGTGATTCAAGGGCTGAAG
GGGCGAGTGTGGCTGCCGGAGGGAAAGGTGCTCGTGAACAACTAGGTCCT
GGACGTATGTAACCTCTTAACCAAAGAAGGCACTCCCTTCTGCATCGCCA
CCACCAGCCCCAAGCCGCGTGTGCCGATCTCGGTCAAGGCCGCCAGCCTC
GAACCCTTTTTCCCCCCGGAGAAAATCCATTCAGGCGAGTCTGATTTCGA
CCCTCCTCGTCCTGCCCTCGGACCCCAAGATTCTCTCTCTGGTGGACGCC
GCGCGGGCCAAGTTCCAGCTGAAGCCTCTGACGGACGTGCTGGCTGCGCA
GAGCTTCCCCTCCATCTTTACCATGCAGAAGGAGGAGACGAATATGGCAC
TGGCTGTCGCGACGAAGGCCTGTGACGGGGAGCGAGAGGGCAAGGGGCTG
TCGACGGTGGAGGAGGCCTGGAGCGATGACCCTGCCGCCCTCCAGTCGTT
CAAGCAGGAGTTCATCGAGAACAACGCTGGCCGAGCTTTCGAATTCATGG
TCGAGGACATCAACAAGATGACAACCGCCGTGTGCTTTGACTTCGACGGC
ACTTTGGGGGATACGGAATCTCCTGCCATGGAGGTGGCCTTTTGGGAGGT
GGCTGCCTACTTGCCCAGCCTGCCCGTTGCTTTAAACCTGCCCCGGACGT
GTACCTCAAGGCAGCTGCTGCGGAGAAATGCGACCCGGAAGACTGCATTG
CCGTTGAAGACTCGGGCTCGGGTGTGGGGTCGGCGGCCAACGCCAGGATG
GGCTTGATTATTGGATATGTAGGCGCGAGTCATATTCCTGCGGGTAAGAA
AGAGAGCCATGCCAAGATGTTAATGGCGGGGGAGAAGAGCGAGGACGGAC
GGGGGGCGCTGTTGGTGGTGGAGGAGTTCCGGAACGTGGCTGTGTTGGTT
AATGCCTTCAAGGCCGCTCGGGCTAAGGGAGATGGGAAGGGTGGGAAGCC
CGGTGCATTTGCCTTTGGGGAGGACGTGATTCAAGGGCTGAAGGGGCGAG
TGTGGCTGCCGGAGGGAAAGGTGCTCGTGAACAACTAGGTCCTGGACGTA
TGTAACCTCTTAACCAAAGAAGGCACTCCCTTCTGCATCGCCACCACCAG
CCCCAAGCCGCGTGTGCCGATCTCGGTCAAGGCCGCCAGCCTCGAACCCT
TTTTCCCCCCGGAGAAAATCCATTCAGGCGAGTCTGATTTCGACCCTCCT
CGTCCTGCCCTCGGACCCCAAGATTCTCTCTCTGGTGGACGCCGCGCGGG
CCAAGTTCCAGCTGAAGCCTCTGACGGACGTGCTGGCTGCGCAGAGCTTC
CCCTCCATCTTTACCATGCAGAAGGAGGAGACGAATATGGCACTGGCTGT
CGCGACGAAGGCCTGTGACGGGGAGCGAGAGGGCAAGGGGCTGTCGACGG
TGGAGGAGGCCTGGAGCGATGACCCTGCCGCCCTCCAGTCGTTCAAGCAG
GAGTTCATCGAGAACAACGCTGGCCGAGCTTTCGAATTCATGGTCGAGGA
CATCAACAAGATGACAACCGCCGTGTGCTTTGACTTCGACGGCACTTTGG
GGGATACGGAATCTCCTGCCATGGAGGTGGCCTTTTGGGAGGTGGCTGCC
TACTTGCCCAGCCTGCCCGTTGCTTTAAACCTGCCCCGGACGTGTACCTC
AAGGCAGCTGCTGCGGAGAAATGCGACCCGGAAGACTGCATTGCCGTTGA
AGACTCGGGCTCGGGTGTGGGGTCGGCGGCCAACGCCAGGATGGGCTTGA
TTATTGGATATGTAGGCGCGAGTCATATTCCTGCGGGTAAGAAAGAGAGC
CATGCCAAGATGTTAATGGCGGGGGAGAAGAGCGAGGACGGACGGGGGGC
GCTGTTGGTGGTGGAGGAGTTCCGGAACGTGGCTGTGTTGGTTAATGCCT
TCAAGGCCGCTCGGGCTAAGGGAGATGGGAAGGGTGGGAAGCCCGGTGCA
TTTGCCTTTGGGGAGGACGTGATTCAAGGGCTGAAGGGGCGAGTGTGGCT
GCCGGAGGGAAAGGTGCTCGTGAACAACTAGGTCCTGGACGTATGTAACC
TCTTAACCAAAGAAGGCACTCCCTTCTGCATCGCCACCACCAGCCCCAAG
CCGCGTGTGCCGATCTCGGTCAAGGCCGCCAGCCTCGAACCCTTTTTCCC
CCCGGAGAAAATCCATTCAGGCGAGTCTGATTTCGACCCTCCTCGTCCTG
CCCTCGGACCCCAAGATTCTCTCTCTGGTGGACGCCGCGCGGGCCAAGTT
CCAGCTGAAGCCTCTGACGGACGTGCTGGCTGCGCAGAGCTTCCCCTCCA
TCTTTACCATGCAGAAGGAGGAGACGAATATGGCACTGGCTGTCGCGACG
AAGGCCTGTGACGGGGAGCGAGAGGGCAAGGGGCTGTCGACGGTGGAGGA
GGCCTGGAGCGATGACCCTGCCGCCCTCCAGTCGTTCAAGCAGGAGTTCA
TCGAGAACAACGCTGGCCGAGCTTTCGAATTCATGGTCGAGGACATCAAC
AAGATGACAACCGCCGTGTGCTTTGACTTCGACGGCACTTTGGGGGATAC
GGAATCTCCTGCCATGGAGGTGGCCTTTTGGGAGGTGGCTGCCTACTTGC
CCAGCCTGCCCGTTGCTTTAAACCTGCCCCGGACGTGTACCTCAAGGCAG
CTGCTGCGGAGAAATGCGACCCGGAAGACTGCATTGCCGTTGAAGACTCG
GGCTCGGGTGTGGGGTCGGCGGCCAACGCCAGGATGGGCTTGATTATTGG
ATATGTAGGCGCGAGTCATATTCCTGCGGGTAAGAAAGAGAGCCATGCCA
AGATGTTAATGGCGGGGGAGAAGAGCGAGGACGGACGGGGGGCGCTGTTG
GTGGTGGAGGAGTTCCGGAACGTGGCTGTGTTGGTTAATGCCTTCAAGGC
CGCTCGGGCTAAGGGAGATGGGAAGGGTGGGAAGCCCGGTGCATTTGCCT
TTGGGGAGGACGTGATTCAAGGGCTGAAGGGGCGAGTGTGGCTGCCGGAG
GGAAAGGTGCTCGTGAACAACTAGGTCCTGGACGTATGTAACCTCTTAAC
CAAAGAAGGCACTCCCTTCTGCATCGCCACCACCAGCCCCAAGCCGCGTG
TGCCGATCTCGGTCAAGGCCGCCAGCCTCGAACCCTTTTTCCCCCCGGAG
AAAATCCATTCAGGCGAGTCTGATTTCGACCCTCCTCGTCCTGCCCTCGG
ACCCCAAGATTCTCTCTCTGGTGGACGCCGCGCGGGCCAAGTTCCAGCTG
AAGCCTCTGACGGACGTGCTGGCTGCGCAGAGCTTCCCCTCCATCTTTAC
CATGCAGAAGGAGGAGACGAATATGGCACTGGCTGTCGCGACGAAGGCCT
GTGACGGGGAGCGAGAGGGCAAGGGGCTGTCGACGGTGGAGGAGGCCTGG
AGCGATGACCCTGCCGCCCTCCAGTCGTTCAAGCAGGAGTTCATCGAGAA
CAACGCTGGCCGAGCTTTCGAATTCATGGTCGAGGACATCAACAAGATGA
CAACCGCCGTGTGCTTTGACTTCGACGGCACTTTGGGGGATACGGAATCT
CCTGCCATGGAGGTGGCCTTTTGGGAGGTGGCTGCCTACTTGCCCAGCCT
GCCCGTTG back to top
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