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Properties
| Property Name | Value |
|---|
| TranscriptId | 248329 |
| Track | FilteredModels2 |
| ProteinId | 248243 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_30 | supercontig | scaffold_30:63117..65281 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8973 ID=mRNA_8973|Name=jgi.p|Nanoce1779_2|248243|organism=Nannochloropsis oceanica|type=mRNA|length=716bp
ACTATCCCTTCAAGTCTCCCTCTATCGGATTCACCAACCGGCTCTTCCAC
CCCAATGTCGACGAAATGTCGGGCTCGGTGTGCCTTGATGTCATCAATCA
GGCATGGACTCCCATGTACGACCTGGTGAACGTCTTCGAGGCCTTTTTGC
CGCAGCTCCTCCGCTATCCCAACCCCAGCGACCCCCTGAATCCCGACGCG
GCCCCACCTCCTCCTCCGCGACCCTGAAAAGTATCACGACCGCGTTCAAG
ACTACGTGCGTCGCTTCGCCTCCGTTCCTTTTCTCCTCCCCCTCCTCCTC
CTCCTCCTCCTCATCCTCCTCCTCATCCTCAGCGGCAAGAGGAGCCAGGC
CCTTGTCGGCTCAGCCGAGGCACCGACATCCCTCTCTGTCGTCGTCGGTG
GCCACGACGGTGTCTGTCGCTCTCTCTTCCTCTCTCACGCCCTCCACCGA
CTCCCACCTCTTTTCCTCCTCTGCCGCCTCCTCTTCCTCCTCTTCCTCCC
TCCGCACCTCCCCTGCGTCCTCCCCACGCCTTCGTCCACGAGGCCACCCA
CGGTCAGTTTCCCTGGGCATGGTCCCCTCGTCCTCCCTCAGCACACGACC
CACCACCGTGCAGGTGGAGGCCTCTCACGGTAAGGGAGGAGGGAGGGAGG
GGATGCATGCTTGATGTCGATGGATGAGAGGGAAGGAGGGCCGTGGGGCA
ACTTTTCTTCTTGTCG back to topprotein sequence of jgi.p|Nanoce1779_2|248243 >mRNA_8973-protein ID=mRNA_8973-protein|Name=jgi.p|Nanoce1779_2|248243|organism=Nannochloropsis oceanica|type=polypeptide|length=187bp
MDSHVRPGERLRGLFAAAPPLSQPQRPPESRRGPTSSSATLKSITTAFKT
TCVASPPFLFSSPSSSSSSSSSSSSSAARGARPLSAQPRHRHPSLSSSVA
TTVSVALSSSLTPSTDSHLFSSSAASSSSSSSLRTSPASSPRLRPRGHPR
SVSLGMVPSSSLSTRPTTVQVEASHGKGGGREGMHA* back to topmRNA from alignment at scaffold_30:63117..65281+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8973 ID=mRNA_8973|Name=jgi.p|Nanoce1779_2|248243|organism=Nannochloropsis oceanica|type=mRNA|length=2165bp|location=Sequence derived from alignment at scaffold_30:63117..65281+ (Nannochloropsis oceanica)
ACTATCCCTTCAAGTCTCCCTCTATCGGATTCACCAACCGGCTCTTCCAC
CCCAATGTCGACGAAATGTAAGGAAGCCCTTCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCTTCCCTTCGTATGTGTTGGTGGTGATATGCTT
CACAGGAGGGGAGGGATGGAGGGAGGGAGGGGCCGAGGGGGGGTACCGCC
ACTCCTCCACCCCCGGCCTCTTCCCTCTCTTCTTTATGACAGCAGCTCGC
CGCTTTGTGCTCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTAGGTCGGGCTCGGTGTGCCTTGATGTCATCAATCAGGCA
TGGACTCCCATGTACGGTAGGTGCCGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCATGCGAGCTATATGGGT
AGGATGAGACACACTGGAGGAAGGAAATTAGAAAAATGCCAGGGGCTGAT
GCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCAGACC
TGGTGAACGTCTTCGAGGCCTTTTTGCCGCAGCTCCTCCGCTATCCCAAC
CCCAGCGACCCCCTGAATCCCGACGGTAGGGAGGGAGGGAGGGGGGGAGG
GAGAGGTGCAGGAAGGGAGGAGGGGAGGGAGGGAAAGGAAGGAAGGAAAA
AGGGAGAGGTGCAGGAAGGGAGGAGGGGAGGGAGGGAAAGGAAGGAAGGA
AGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAAAAGTACACATGCT
GGGTCTGTGTTATAAGATGTATCCATCTCTCTTGTTTATTTACCTCACCT
GCTTCCTCCCTCCCTCCCTCCCGCTTCCCTCCCTCCCTCCCTCTCTCCCC
CCTCCAGCGGCCCCACCTCCTCCTCCGCGACCCTGAAAAGTATCACGACC
GCGTTCAAGGTGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGATTCTGTCACAGCAAAAGAATGCTAAAATCCCTCAACAATT
TATCTTTCCGCCTCCCTCCCTCCCTCCCTCCCTTTAAGACTACGTGCGTC
GCTTCGCCTCCGTTCCTTTTCTCCTCGCCGACGAGGGCGGGGGCAGGGGG
GGGGGGAAGGCGGGGGGGAGGGAGGGAGGGAGGGCGAGGACAGCCTCTTC
TTCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCATCCTCCTCCTCATCCT
CAGCGGCAAGAGGAGCCAGGCCCTTGTCGGCTCAGCCGAGGCACCGACAT
CCCTCTCTGTCGTCGTCGGTGGTAAGGAGGGAGGGAGGGAGGGAGGGAGA
GAAGGAGGGAGGGAAGACCCAATGGCATTGCTTTCATCGAATCTCTGCCT
TGTCTGTGTTGCTGTTGATTGATTTCATAATGCGTCCTTCGTTCCTTCCT
TCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCA
GGCCACGACGGTGTCTGTCGCTCTCTCTTCCTCTCTCACGCCCTCCACCG
ACTCCCACCTCTTTTCCTCCTCTGCCGCCTCCTCTTCCTCCTCTTCCTCC
CTCCGCACCTCCCCTGCGTCCTCCCCACGCCTTCGTCCACGAGGCCACCC
ACGGTACGTCCTCCTAACTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCC
TCCCTTCCTCTTCCATTTAAAACATTTTCAAATTTTCGGTCTCGCTGAGA
TATGCCCGTGTCTTGTCCCACTGCCCTCCCTCCCTCCCTCCCTCACTCAC
TCACTCCGTTTCCTCCTCCCTCCTTCCTTCCCTTCCTTTTAAACCTCAGC
TCATCATCACGCCTTCCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCA
GGTCAGTTTCCCTGGGCATGGTCCCCTCGTCCTCCCTCAGCACACGACCC
ACCACCGTGCAGGTGGAGGCCTCTCACGGTAAGGGAGGAGGGAGGGAGGG
GATGCATGCTTGATGTCGATGGATGAGAGGGAAGGAGGGCCGTGGGGCAA
CTTTTCTTCTTGTCG back to topCoding sequence (CDS) from alignment at scaffold_30:63117..65281+ >mRNA_8973 ID=mRNA_8973|Name=jgi.p|Nanoce1779_2|248243|organism=Nannochloropsis oceanica|type=CDS|length=3927bp|location=Sequence derived from alignment at scaffold_30:63117..65281+ (Nannochloropsis oceanica)
ATGGACTCCCATGTACGACCTGGTGAACGTCTTCGAGGCCTTTTTGCCGC
AGCTCCTCCGCTATCCCAACCCCAGCGACCCCCTGAATCCCGACGCGGCC
CCACCTCCTCCTCCGCGACCCTGAAAAGTATCACGACCGCGTTCAAGACT
ACGTGCGTCGCTTCGCCTCCGTTCCTTTTCTCCTCCCCCTCCTCCTCCTC
CTCCTCCTCATCCTCCTCCTCATCCTCAGCGGCAAGAGGAGCCAGGCCCT
TGTCGGCTCAGCCGAGGCACCGACATCCCTCTCTGTCGTCGTCGGTGGCC
ACGACGGTGTCTGTCGCTCTCTCTTCCTCTCTCACGCCCTCCACCGACTC
CCACCTCTTTTCCTCCTCTGCCGCCTCCTCTTCCTCCTCTTCCTCCCTCC
GCACCTCCCCTGCGTCCTCCCCACGCCTTCGTCCACGAGGCCACCCACGG
TCAGTTTCCCTGGGCATGGTCCCCTCGTCCTCCCTCAGCACACGACCCAC
CACCGTGCAGGTGGAGGCCTCTCACGGTAAGGGAGGAGGGAGGGAGGGGA
TGCATGCTTGAATGGACTCCCATGTACGACCTGGTGAACGTCTTCGAGGC
CTTTTTGCCGCAGCTCCTCCGCTATCCCAACCCCAGCGACCCCCTGAATC
CCGACGCGGCCCCACCTCCTCCTCCGCGACCCTGAAAAGTATCACGACCG
CGTTCAAGACTACGTGCGTCGCTTCGCCTCCGTTCCTTTTCTCCTCCCCC
TCCTCCTCCTCCTCCTCCTCATCCTCCTCCTCATCCTCAGCGGCAAGAGG
AGCCAGGCCCTTGTCGGCTCAGCCGAGGCACCGACATCCCTCTCTGTCGT
CGTCGGTGGCCACGACGGTGTCTGTCGCTCTCTCTTCCTCTCTCACGCCC
TCCACCGACTCCCACCTCTTTTCCTCCTCTGCCGCCTCCTCTTCCTCCTC
TTCCTCCCTCCGCACCTCCCCTGCGTCCTCCCCACGCCTTCGTCCACGAG
GCCACCCACGGTCAGTTTCCCTGGGCATGGTCCCCTCGTCCTCCCTCAGC
ACACGACCCACCACCGTGCAGGTGGAGGCCTCTCACGGTAAGGGAGGAGG
GAGGGAGGGGATGCATGCTTGAATGGACTCCCATGTACGACCTGGTGAAC
GTCTTCGAGGCCTTTTTGCCGCAGCTCCTCCGCTATCCCAACCCCAGCGA
CCCCCTGAATCCCGACGCGGCCCCACCTCCTCCTCCGCGACCCTGAAAAG
TATCACGACCGCGTTCAAGACTACGTGCGTCGCTTCGCCTCCGTTCCTTT
TCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCATCCTCCTCCTCATCCTCA
GCGGCAAGAGGAGCCAGGCCCTTGTCGGCTCAGCCGAGGCACCGACATCC
CTCTCTGTCGTCGTCGGTGGCCACGACGGTGTCTGTCGCTCTCTCTTCCT
CTCTCACGCCCTCCACCGACTCCCACCTCTTTTCCTCCTCTGCCGCCTCC
TCTTCCTCCTCTTCCTCCCTCCGCACCTCCCCTGCGTCCTCCCCACGCCT
TCGTCCACGAGGCCACCCACGGTCAGTTTCCCTGGGCATGGTCCCCTCGT
CCTCCCTCAGCACACGACCCACCACCGTGCAGGTGGAGGCCTCTCACGGT
AAGGGAGGAGGGAGGGAGGGGATGCATGCTTGAATGGACTCCCATGTACG
ACCTGGTGAACGTCTTCGAGGCCTTTTTGCCGCAGCTCCTCCGCTATCCC
AACCCCAGCGACCCCCTGAATCCCGACGCGGCCCCACCTCCTCCTCCGCG
ACCCTGAAAAGTATCACGACCGCGTTCAAGACTACGTGCGTCGCTTCGCC
TCCGTTCCTTTTCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCATCCTCCT
CCTCATCCTCAGCGGCAAGAGGAGCCAGGCCCTTGTCGGCTCAGCCGAGG
CACCGACATCCCTCTCTGTCGTCGTCGGTGGCCACGACGGTGTCTGTCGC
TCTCTCTTCCTCTCTCACGCCCTCCACCGACTCCCACCTCTTTTCCTCCT
CTGCCGCCTCCTCTTCCTCCTCTTCCTCCCTCCGCACCTCCCCTGCGTCC
TCCCCACGCCTTCGTCCACGAGGCCACCCACGGTCAGTTTCCCTGGGCAT
GGTCCCCTCGTCCTCCCTCAGCACACGACCCACCACCGTGCAGGTGGAGG
CCTCTCACGGTAAGGGAGGAGGGAGGGAGGGGATGCATGCTTGAATGGAC
TCCCATGTACGACCTGGTGAACGTCTTCGAGGCCTTTTTGCCGCAGCTCC
TCCGCTATCCCAACCCCAGCGACCCCCTGAATCCCGACGCGGCCCCACCT
CCTCCTCCGCGACCCTGAAAAGTATCACGACCGCGTTCAAGACTACGTGC
GTCGCTTCGCCTCCGTTCCTTTTCTCCTCCCCCTCCTCCTCCTCCTCCTC
CTCATCCTCCTCCTCATCCTCAGCGGCAAGAGGAGCCAGGCCCTTGTCGG
CTCAGCCGAGGCACCGACATCCCTCTCTGTCGTCGTCGGTGGCCACGACG
GTGTCTGTCGCTCTCTCTTCCTCTCTCACGCCCTCCACCGACTCCCACCT
CTTTTCCTCCTCTGCCGCCTCCTCTTCCTCCTCTTCCTCCCTCCGCACCT
CCCCTGCGTCCTCCCCACGCCTTCGTCCACGAGGCCACCCACGGTCAGTT
TCCCTGGGCATGGTCCCCTCGTCCTCCCTCAGCACACGACCCACCACCGT
GCAGGTGGAGGCCTCTCACGGTAAGGGAGGAGGGAGGGAGGGGATGCATG
CTTGAATGGACTCCCATGTACGACCTGGTGAACGTCTTCGAGGCCTTTTT
GCCGCAGCTCCTCCGCTATCCCAACCCCAGCGACCCCCTGAATCCCGACG
CGGCCCCACCTCCTCCTCCGCGACCCTGAAAAGTATCACGACCGCGTTCA
AGACTACGTGCGTCGCTTCGCCTCCGTTCCTTTTCTCCTCCCCCTCCTCC
TCCTCCTCCTCCTCATCCTCCTCCTCATCCTCAGCGGCAAGAGGAGCCAG
GCCCTTGTCGGCTCAGCCGAGGCACCGACATCCCTCTCTGTCGTCGTCGG
TGGCCACGACGGTGTCTGTCGCTCTCTCTTCCTCTCTCACGCCCTCCACC
GACTCCCACCTCTTTTCCTCCTCTGCCGCCTCCTCTTCCTCCTCTTCCTC
CCTCCGCACCTCCCCTGCGTCCTCCCCACGCCTTCGTCCACGAGGCCACC
CACGGTCAGTTTCCCTGGGCATGGTCCCCTCGTCCTCCCTCAGCACACGA
CCCACCACCGTGCAGGTGGAGGCCTCTCACGGTAAGGGAGGAGGGAGGGA
GGGGATGCATGCTTGAATGGACTCCCATGTACGACCTGGTGAACGTCTTC
GAGGCCTTTTTGCCGCAGCTCCTCCGCTATCCCAACCCCAGCGACCCCCT
GAATCCCGACGCGGCCCCACCTCCTCCTCCGCGACCCTGAAAAGTATCAC
GACCGCGTTCAAGACTACGTGCGTCGCTTCGCCTCCGTTCCTTTTCTCCT
CCCCCTCCTCCTCCTCCTCCTCCTCATCCTCCTCCTCATCCTCAGCGGCA
AGAGGAGCCAGGCCCTTGTCGGCTCAGCCGAGGCACCGACATCCCTCTCT
GTCGTCGTCGGTGGCCACGACGGTGTCTGTCGCTCTCTCTTCCTCTCTCA
CGCCCTCCACCGACTCCCACCTCTTTTCCTCCTCTGCCGCCTCCTCTTCC
TCCTCTTCCTCCCTCCGCACCTCCCCTGCGTCCTCCCCACGCCTTCGTCC
ACGAGGCCACCCACGGTCAGTTTCCCTGGGCATGGTCCCCTCGTCCTCCC
TCAGCACACGACCCACCACCGTGCAGGTGGAGGCCTCTCACGGTAAGGGA
GGAGGGAGGGAGGGGATGCATGCTTGA back to top
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