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Properties
| Property Name | Value |
|---|
| TranscriptId | 604641 |
| Track | FilteredModels2 |
| ProteinId | 604555 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_29 | supercontig | scaffold_29:258139..259130 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8935 ID=mRNA_8935|Name=jgi.p|Nanoce1779_2|604555|organism=Nannochloropsis oceanica|type=mRNA|length=606bp
ACAGCACAGAAACGCTGACCATAGTCCAAAATATGATTTCCATGCTGCGT
CCAGTCTTTTTGCGCCAGGGTCTCGTCGCCAGACACCCCTTCCCATGCAG
AAGCAACAATAACCCCCTCTACAAAGCTGCCAGTGTGCACACTGAGGCCA
AGCTGGCCGAGATGGGGCTCAAGCTCCCGCCCCCCGGTGTGCCGAAGGGG
AACTTCGCCATGGCCGTGCGGAGCGGCAAGATGATTTACCTGTCTGGCCA
CCTCCCCACTGACGCGGACGGGAAGCTCATAACGGGTAAAGTTGGTGCAG
AGGTCACGCCAGAAGATGCCCAAAAAGCTGCCAAGCTGATAGCCCTCAAC
CTCCTCTCCTCCTTGAAAAAGGAGATTGGAGACTTGGACAAGGTCCAACG
CGTGATCAAGCTTCTAGGGTTTGTGAATTGCACGGACGGGTTTACGCAAC
AGCCCTTGGTCATTAATGGCGCGAGTGATTTCTTGGTCCAGGTTCTGGGG
GAGACGAAAGGGAAACATGCCAGGAGTGCGGTGGGTACGAATGCTTTACC
TTTGAATGTGCCGGTGGAGATTGAGATGATCGTGGAGTTGCAGTAGCGGG
CGGAGG back to topprotein sequence of jgi.p|Nanoce1779_2|604555 >mRNA_8935-protein ID=mRNA_8935-protein|Name=jgi.p|Nanoce1779_2|604555|organism=Nannochloropsis oceanica|type=polypeptide|length=188bp
MISMLRPVFLRQGLVARHPFPCRSNNNPLYKAASVHTEAKLAEMGLKLPP
PGVPKGNFAMAVRSGKMIYLSGHLPTDADGKLITGKVGAEVTPEDAQKAA
KLIALNLLSSLKKEIGDLDKVQRVIKLLGFVNCTDGFTQQPLVINGASDF
LVQVLGETKGKHARSAVGTNALPLNVPVEIEMIVELQ* back to topmRNA from alignment at scaffold_29:258139..259130+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8935 ID=mRNA_8935|Name=jgi.p|Nanoce1779_2|604555|organism=Nannochloropsis oceanica|type=mRNA|length=992bp|location=Sequence derived from alignment at scaffold_29:258139..259130+ (Nannochloropsis oceanica)
ACAGCACAGAAACGCTGACCATAGTCCAAAATATGATTTCCATGCTGCGT
CCAGTCTTTTTGCGCCAGGGTCTCGTCGCCAGGTAAGTAAGAAGCCGCCT
TCGTCCTCCAAGCCACGCCACGACGCTCATTTACCCCTCCCCTGCCTCCC
CACCCACCACCACCCCATCATATCCACAGACACCCCTTCCCATGCAGAAG
CAACAATAACCCCCTCTACAAAGCTGCCAGTGTGCACACTGAGGCCAAGC
TGGCCGAGATGGGGCTCAAGCTCCCGCCCCCCGGTGTGCCGAAGGGGAAC
TTCGCCATGGCCGTGCGGAGCGGCAAGATGATTTACCTGTGTACGTTGCA
CTGAGAGATTGATGGAAGAATTACCTAAGCTGTTCAATTACTTTTTGGTT
GACTTTTCTTCAATATCCGCAATCGTAGTCTCCCTCTTTGCCCCGTCGCA
CACCCAATCCTAACCCACAGAACGCCGGGCACATCCCCACTCTCTCTCAT
TCACATATTCACACTCTCTCTCACACAGCTGGCCACCTCCCCACTGACGC
GGACGGGAAGCTCATAACGGGTAAAGTTGGTGCAGAGGTCACGCCAGAAG
ATGCCCAAAAAGCTGCCAAGCTGATAGCCCTCAACCTCCTCTCCTCCTTG
AAAAAGGAGATTGGAGACTTGGACAAGGTACGTCTCTTCCTTCCCTCCCT
GCCTCCCTGCCTCCCTCCCTCCCTCGTTCACTACTTCTCTTCTTCCTCTT
ATTCCCTTTTCCGGGTTTCGAATCACAGGTCCAACGCGTGATCAAGCTTC
TAGGGTTTGTGAATTGCACGGACGGGTTTACGCAACAGCCCTTGGTCATT
AATGGCGCGAGTGATTTCTTGGTCCAGGTTCTGGGGGAGACGAAAGGGAA
ACATGCCAGGAGTGCGGTGGGTACGAATGCTTTACCTTTGAATGTGCCGG
TGGAGATTGAGATGATCGTGGAGTTGCAGTAGCGGGCGGAGG back to topCoding sequence (CDS) from alignment at scaffold_29:258139..259130+ >mRNA_8935 ID=mRNA_8935|Name=jgi.p|Nanoce1779_2|604555|organism=Nannochloropsis oceanica|type=CDS|length=2256bp|location=Sequence derived from alignment at scaffold_29:258139..259130+ (Nannochloropsis oceanica)
ATGATTTCCATGCTGCGTCCAGTCTTTTTGCGCCAGGGTCTCGTCGCCAG
ACACCCCTTCCCATGCAGAAGCAACAATAACCCCCTCTACAAAGCTGCCA
GTGTGCACACTGAGGCCAAGCTGGCCGAGATGGGGCTCAAGCTCCCGCCC
CCCGGTGTGCCGAAGGGGAACTTCGCCATGGCCGTGCGGAGCGGCAAGAT
GATTTACCTGTCTGGCCACCTCCCCACTGACGCGGACGGGAAGCTCATAA
CGGGTAAAGTTGGTGCAGAGGTCACGCCAGAAGATGCCCAAAAAGCTGCC
AAGCTGATAGCCCTCAACCTCCTCTCCTCCTTGAAAAAGGAGATTGGAGA
CTTGGACAAGGTCCAACGCGTGATCAAGCTTCTAGGGTTTGTGAATTGCA
CGGACGGGTTTACGCAACAGCCCTTGGTCATTAATGGCGCGAGTGATTTC
TTGGTCCAGGTTCTGGGGGAGACGAAAGGGAAACATGCCAGGAGTGCGGT
GGGTACGAATGCTTTACCTTTGAATGTGCCGGTGGAGATTGAGATGATCG
TGGAGTTGCAGTAGATGATTTCCATGCTGCGTCCAGTCTTTTTGCGCCAG
GGTCTCGTCGCCAGACACCCCTTCCCATGCAGAAGCAACAATAACCCCCT
CTACAAAGCTGCCAGTGTGCACACTGAGGCCAAGCTGGCCGAGATGGGGC
TCAAGCTCCCGCCCCCCGGTGTGCCGAAGGGGAACTTCGCCATGGCCGTG
CGGAGCGGCAAGATGATTTACCTGTCTGGCCACCTCCCCACTGACGCGGA
CGGGAAGCTCATAACGGGTAAAGTTGGTGCAGAGGTCACGCCAGAAGATG
CCCAAAAAGCTGCCAAGCTGATAGCCCTCAACCTCCTCTCCTCCTTGAAA
AAGGAGATTGGAGACTTGGACAAGGTCCAACGCGTGATCAAGCTTCTAGG
GTTTGTGAATTGCACGGACGGGTTTACGCAACAGCCCTTGGTCATTAATG
GCGCGAGTGATTTCTTGGTCCAGGTTCTGGGGGAGACGAAAGGGAAACAT
GCCAGGAGTGCGGTGGGTACGAATGCTTTACCTTTGAATGTGCCGGTGGA
GATTGAGATGATCGTGGAGTTGCAGTAGATGATTTCCATGCTGCGTCCAG
TCTTTTTGCGCCAGGGTCTCGTCGCCAGACACCCCTTCCCATGCAGAAGC
AACAATAACCCCCTCTACAAAGCTGCCAGTGTGCACACTGAGGCCAAGCT
GGCCGAGATGGGGCTCAAGCTCCCGCCCCCCGGTGTGCCGAAGGGGAACT
TCGCCATGGCCGTGCGGAGCGGCAAGATGATTTACCTGTCTGGCCACCTC
CCCACTGACGCGGACGGGAAGCTCATAACGGGTAAAGTTGGTGCAGAGGT
CACGCCAGAAGATGCCCAAAAAGCTGCCAAGCTGATAGCCCTCAACCTCC
TCTCCTCCTTGAAAAAGGAGATTGGAGACTTGGACAAGGTCCAACGCGTG
ATCAAGCTTCTAGGGTTTGTGAATTGCACGGACGGGTTTACGCAACAGCC
CTTGGTCATTAATGGCGCGAGTGATTTCTTGGTCCAGGTTCTGGGGGAGA
CGAAAGGGAAACATGCCAGGAGTGCGGTGGGTACGAATGCTTTACCTTTG
AATGTGCCGGTGGAGATTGAGATGATCGTGGAGTTGCAGTAGATGATTTC
CATGCTGCGTCCAGTCTTTTTGCGCCAGGGTCTCGTCGCCAGACACCCCT
TCCCATGCAGAAGCAACAATAACCCCCTCTACAAAGCTGCCAGTGTGCAC
ACTGAGGCCAAGCTGGCCGAGATGGGGCTCAAGCTCCCGCCCCCCGGTGT
GCCGAAGGGGAACTTCGCCATGGCCGTGCGGAGCGGCAAGATGATTTACC
TGTCTGGCCACCTCCCCACTGACGCGGACGGGAAGCTCATAACGGGTAAA
GTTGGTGCAGAGGTCACGCCAGAAGATGCCCAAAAAGCTGCCAAGCTGAT
AGCCCTCAACCTCCTCTCCTCCTTGAAAAAGGAGATTGGAGACTTGGACA
AGGTCCAACGCGTGATCAAGCTTCTAGGGTTTGTGAATTGCACGGACGGG
TTTACGCAACAGCCCTTGGTCATTAATGGCGCGAGTGATTTCTTGGTCCA
GGTTCTGGGGGAGACGAAAGGGAAACATGCCAGGAGTGCGGTGGGTACGA
ATGCTTTACCTTTGAATGTGCCGGTGGAGATTGAGATGATCGTGGAGTTG
CAGTAG back to top
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