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Properties
| Property Name | Value |
|---|
| TranscriptId | 604545 |
| Track | FilteredModels2 |
| ProteinId | 604459 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_29 | supercontig | scaffold_29:169683..170750 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8911 ID=mRNA_8911|Name=jgi.p|Nanoce1779_2|604459|organism=Nannochloropsis oceanica|type=mRNA|length=808bp
ACAGGCCTGGGCACACATCATTACTTATAACCGGAGGCCATGGAGGGCGG
CAATGGCGGCCTTATGCAGGACCAGTACCGCCCTCCGATCACTCAATGCA
CCGCCTTCCGCCTCGAAAAGTCATGCATTGCACAACTCCCTGCCCCTGCC
CGCGCCGCTCTCGATCACCTGGCGCAGCAGTCAGCGCACTCCCAATCCCT
GCGCGGGCCCATCTCCTGCACTACCCGCCTCCTCGCCTCGGACAACCATG
TCGTGTACCTCCTTACATTGCCCTCGCCCTCATCCCCTTCTTCTCTCTCG
ACGTCCAGTGGTGTTCCTCGCCTACTCATCTCGTTGTCGTCTTCTTCCTT
GACTTCCTGCTCGTCCTCCGCTTGCTCCCCCATCGGCTTCCTCAAGTTGG
GGCGGAAGCACCTTTTCGTCTCTAGCCCTTCAGGCCAGGTTATCGAAATT
TCCCCCCTCTGTCTCCTTGACTTCTACATCTCCACCCCGTTCCAACGCCA
CGGGCTTGGTGCTTCGTTCCTGCGCGCCGTCCTTCGACACGAAGGGATCG
CGAATGCGCCTCACCTCCTTGCGTACGACCGGCCATCGGAGCGTCTTCTC
CCCTTTCTCGCCAAGCACTTTGGCCTGCACAAGTACGTGCCACAGCATAA
CCACTTTGTGATCTTTGACGAGTACTTCTCCTCCTCCTCTTCCTCCTCCT
CTTCCCCCTCCACCACCGCCACCACCACCGCCACCACCACCCTTGCCGTA
TAAACGTGTCCATAAGAGCTGCTCCAAAATGGGGGGGAGGACGAGAGGGG
TGAGGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|604459 >mRNA_8911-protein ID=mRNA_8911-protein|Name=jgi.p|Nanoce1779_2|604459|organism=Nannochloropsis oceanica|type=polypeptide|length=238bp
MEGGNGGLMQDQYRPPITQCTAFRLEKSCIAQLPAPARAALDHLAQQSAH
SQSLRGPISCTTRLLASDNHVVYLLTLPSPSSPSSLSTSSGVPRLLISLS
SSSLTSCSSSACSPIGFLKLGRKHLFVSSPSGQVIEISPLCLLDFYISTP
FQRHGLGASFLRAVLRHEGIANAPHLLAYDRPSERLLPFLAKHFGLHKYV
PQHNHFVIFDEYFSSSSSSSSSPSTTATTTATTTLAV* back to topmRNA from alignment at scaffold_29:169683..170750- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8911 ID=mRNA_8911|Name=jgi.p|Nanoce1779_2|604459|organism=Nannochloropsis oceanica|type=mRNA|length=1068bp|location=Sequence derived from alignment at scaffold_29:169683..170750- (Nannochloropsis oceanica)
ACAGGCCTGGGCACACATCATTACTTATAACCGGAGGCCATGGAGGGCGG
CAATGGCGGCCTTATGCAGGACCAGTACCGCCCTCCGATCACTCAATGCA
CCGCCTTCCGCCTCGAAAAGTCATGCATTGGTACGTCCCATCCCTCCTTT
CTCCACACAACCCGCTCCATCTCCCTTGCTCTTGTCAACCTGCTTTCAAA
TACTACAATATTCTATACAGCACAACTCCCTGCCCCTGCCCGCGCCGCTC
TCGATCACCTGGCGCAGCAGTCAGCGCACTCCCAATCCCTGCGCGGGCCC
ATCTCCTGCACTACCCGCCTCCTCGCCTCGGACAACCATGTCGTGTACCT
CCTTACATTGCCCTCGCCCTCATCCCCTTCTTCTCTCTCGACGTCCAGTG
GTGTTCCTCGCCTACTCATCTCGTTGTCGTCTTCTTCCTTGACTTCCTGC
TCGTCCTCCGCTTGCTCCCCCATCGGCTTCCTCAAGTTGGGGCGGAAGCA
CCTTTTCGTCTCTAGCCCTTCAGGCCAGGTAAAGGAGAAAGTTGTGAGAG
GGGTGCATTGGAGAAGGAGGAGTGAAGAGGGTGAAATAGGAGGCACAAGA
ATTGATTGCCTCCTTAAGGCACGAATGCCAGCTTTAGAAACCCGCCCTTA
AACAATCCTCCCTCCCTCCCTCCTTCCCTCCTTCCCTCCCCCCTCAAGGT
TATCGAAATTTCCCCCCTCTGTCTCCTTGACTTCTACATCTCCACCCCGT
TCCAACGCCACGGGCTTGGTGCTTCGTTCCTGCGCGCCGTCCTTCGACAC
GAAGGGATCGCGAATGCGCCTCACCTCCTTGCGTACGACCGGCCATCGGA
GCGTCTTCTCCCCTTTCTCGCCAAGCACTTTGGCCTGCACAAGTACGTGC
CACAGCATAACCACTTTGTGATCTTTGACGAGTACTTCTCCTCCTCCTCT
TCCTCCTCCTCTTCCCCCTCCACCACCGCCACCACCACCGCCACCACCAC
CCTTGCCGTATAAACGTGTCCATAAGAGCTGCTCCAAAATGGGGGGGAGG
ACGAGAGGGGTGAGGGGG back to topCoding sequence (CDS) from alignment at scaffold_29:169683..170750- >mRNA_8911 ID=mRNA_8911|Name=jgi.p|Nanoce1779_2|604459|organism=Nannochloropsis oceanica|type=CDS|length=2142bp|location=Sequence derived from alignment at scaffold_29:169683..170750- (Nannochloropsis oceanica)
GTTATCGAAATTTCCCCCCTCTGTCTCCTTGACTTCTACATCTCCACCCC
GTTCCAACGCCACGGGCTTGGTGCTTCGTTCCTGCGCGCCGTCCTTCGAC
ACGAAGGGATCGCGAATGCGCCTCACCTCCTTGCGTACGACCGGCCATCG
GAGCGTCTTCTCCCCTTTCTCGCCAAGCACTTTGGCCTGCACAAGTACGT
GCCACAGCATAACCACTTTGTGATCTTTGACGAGTACTTCTCCTCCTCCT
CTTCCTCCTCCTCTTCCCCCTCCACCACCGCCACCACCACCGCCACCACC
ACCCTTGCCGTATAACACAACTCCCTGCCCCTGCCCGCGCCGCTCTCGAT
CACCTGGCGCAGCAGTCAGCGCACTCCCAATCCCTGCGCGGGCCCATCTC
CTGCACTACCCGCCTCCTCGCCTCGGACAACCATGTCGTGTACCTCCTTA
CATTGCCCTCGCCCTCATCCCCTTCTTCTCTCTCGACGTCCAGTGGTGTT
CCTCGCCTACTCATCTCGTTGTCGTCTTCTTCCTTGACTTCCTGCTCGTC
CTCCGCTTGCTCCCCCATCGGCTTCCTCAAGTTGGGGCGGAAGCACCTTT
TCGTCTCTAGCCCTTCAGGCCAGATGGAGGGCGGCAATGGCGGCCTTATG
CAGGACCAGTACCGCCCTCCGATCACTCAATGCACCGCCTTCCGCCTCGA
AAAGTCATGCATTGGTTATCGAAATTTCCCCCCTCTGTCTCCTTGACTTC
TACATCTCCACCCCGTTCCAACGCCACGGGCTTGGTGCTTCGTTCCTGCG
CGCCGTCCTTCGACACGAAGGGATCGCGAATGCGCCTCACCTCCTTGCGT
ACGACCGGCCATCGGAGCGTCTTCTCCCCTTTCTCGCCAAGCACTTTGGC
CTGCACAAGTACGTGCCACAGCATAACCACTTTGTGATCTTTGACGAGTA
CTTCTCCTCCTCCTCTTCCTCCTCCTCTTCCCCCTCCACCACCGCCACCA
CCACCGCCACCACCACCCTTGCCGTATAACACAACTCCCTGCCCCTGCCC
GCGCCGCTCTCGATCACCTGGCGCAGCAGTCAGCGCACTCCCAATCCCTG
CGCGGGCCCATCTCCTGCACTACCCGCCTCCTCGCCTCGGACAACCATGT
CGTGTACCTCCTTACATTGCCCTCGCCCTCATCCCCTTCTTCTCTCTCGA
CGTCCAGTGGTGTTCCTCGCCTACTCATCTCGTTGTCGTCTTCTTCCTTG
ACTTCCTGCTCGTCCTCCGCTTGCTCCCCCATCGGCTTCCTCAAGTTGGG
GCGGAAGCACCTTTTCGTCTCTAGCCCTTCAGGCCAGATGGAGGGCGGCA
ATGGCGGCCTTATGCAGGACCAGTACCGCCCTCCGATCACTCAATGCACC
GCCTTCCGCCTCGAAAAGTCATGCATTGGTTATCGAAATTTCCCCCCTCT
GTCTCCTTGACTTCTACATCTCCACCCCGTTCCAACGCCACGGGCTTGGT
GCTTCGTTCCTGCGCGCCGTCCTTCGACACGAAGGGATCGCGAATGCGCC
TCACCTCCTTGCGTACGACCGGCCATCGGAGCGTCTTCTCCCCTTTCTCG
CCAAGCACTTTGGCCTGCACAAGTACGTGCCACAGCATAACCACTTTGTG
ATCTTTGACGAGTACTTCTCCTCCTCCTCTTCCTCCTCCTCTTCCCCCTC
CACCACCGCCACCACCACCGCCACCACCACCCTTGCCGTATAACACAACT
CCCTGCCCCTGCCCGCGCCGCTCTCGATCACCTGGCGCAGCAGTCAGCGC
ACTCCCAATCCCTGCGCGGGCCCATCTCCTGCACTACCCGCCTCCTCGCC
TCGGACAACCATGTCGTGTACCTCCTTACATTGCCCTCGCCCTCATCCCC
TTCTTCTCTCTCGACGTCCAGTGGTGTTCCTCGCCTACTCATCTCGTTGT
CGTCTTCTTCCTTGACTTCCTGCTCGTCCTCCGCTTGCTCCCCCATCGGC
TTCCTCAAGTTGGGGCGGAAGCACCTTTTCGTCTCTAGCCCTTCAGGCCA
GATGGAGGGCGGCAATGGCGGCCTTATGCAGGACCAGTACCGCCCTCCGA
TCACTCAATGCACCGCCTTCCGCCTCGAAAAGTCATGCATTG back to top
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