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Properties
| Property Name | Value |
|---|
| TranscriptId | 574623 |
| Track | FilteredModels2 |
| ProteinId | 574537 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:672641..674330 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_891 ID=mRNA_891|Name=jgi.p|Nanoce1779_2|574537|organism=Nannochloropsis oceanica|type=mRNA|length=1502bp
ACAGATGCCTCCTCCTTCCCCTCTTCCTCCTCCTCCCCCACCGCCACTGC
CTCATGCAGCACCAGCTTCATCGATCAAGCCCAAGAGACCGATTGCTGAA
GGAGGACGCGGCAACGAGCCACCTGTGAAAAAAGTGTCACTACCACCGCC
GCCTCCTCCACGACCGGCAGCGCCACCACCAGCTCGGCTCGGACCGCAGC
AGCAACAGCAGGCCAACAAACCGCCCTCGGCAGCCACAAATCGACCAGGC
ATCCCCACGCATGTCACCCCACCCCCCGTTATACCAATGGCGGTGCCCAG
AGCGCCAACTTTGGTGGGGGCCACGGACATGGCGTCTAAGTACGAAATGT
TGGAGCAAATTGGGAGTGGCACCTACGGCTACGTGTTTCGAGCCCGCGTG
CGGGGCACGGACAAGGTGGTTGCCCTGAAGAGGATCAAGATGGACGACCC
CCGGCCTGAGGCACATCGGGATGGGTTCCCAATCACAGCCCTCCGTGAAA
TCAAGCTCCTCAGCTGTATGTCTCACGAGAACGTGGTCCGCCTCGAGGAA
ATTGCTACCTCCAACAGCAGTAGTAGCGCCTCCTCTTCTTCCTCATCCCA
GGGAGAAGAGAACGACTTCGGGCTCGTCTCGCACGTTCCCTCTTCTATCT
ACATGGTCTTTGAGTACTGCGAAGCTGATCTCTTGGACGTGCTCAAAGCC
GTGCGCAACCACACCCTTTACCTCACCCAGGACCACTTCCATTCCTTCAC
CCGCCAGCTCCTCGAAGGCATGTTCTATATCCACAAGAATCGTATTCTGC
ATCGTGATATCAAGGCTGCCAACATCCTCGTCACTCGTGACTGTCGTCTG
AAAATAGGCGATTGGGGCCTCGCTCGCACTTGTCATCCGCCCCCTTATCC
CGCGCCGATGGTGGCGGAGGATCGCGGGGGTGTGCGATCGGCGAGTGAGA
GGGAGAAGACGAGTAGGTATACCGACAACGTGGTGACGCTTTGGTATCGT
GCTCCTGAGTTGTTGATGGGGGTGACCAGCTACACCACCGCCATTGATAT
GTGGTCTATCGGCTGTTTGATCGCAGAGTTGTTTTTGCTGCGCACGTTGC
TGCAAGGCCGCGACGAATTAGAGCAGCTGAACTTGATTTTTAATCTGTGT
GGGACTCCGAGCCCGGACACATGGCCTGCTCTCGGGCAAGGACAAGCGCA
AGCCCCCCCTCCTCCTCCCTCTCGTCCTCCTCCCTCCCGCCCTCTCCACC
CGTCTTATCGTCCGCGGATCGTGAAGCAAAAATTGAGCTGTACGCCAGGG
GGAAAAGAAGGGGCCGATCTGGTTGACAAGCTGTTGGCGCTTAATCCCAA
CAGTCGGTGGAGTGCAGAGCAGGCATTAGATCACGATTATTTGTGGATGG
AAGACCCAAAAGAGCCAGGAGAATTGCCGCCGATCATACATTTGAGAAGA
GCTCAGGCGAATGCGGGGGGGAAGGGGTGAGAGAGGAAAGGAAAGAAGAG
AC back to topprotein sequence of jgi.p|Nanoce1779_2|574537 >mRNA_891-protein ID=mRNA_891-protein|Name=jgi.p|Nanoce1779_2|574537|organism=Nannochloropsis oceanica|type=polypeptide|length=492bp
MPPPSPLPPPPPPPLPHAAPASSIKPKRPIAEGGRGNEPPVKKVSLPPPP
PPRPAAPPPARLGPQQQQQANKPPSAATNRPGIPTHVTPPPVIPMAVPRA
PTLVGATDMASKYEMLEQIGSGTYGYVFRARVRGTDKVVALKRIKMDDPR
PEAHRDGFPITALREIKLLSCMSHENVVRLEEIATSNSSSSASSSSSSQG
EENDFGLVSHVPSSIYMVFEYCEADLLDVLKAVRNHTLYLTQDHFHSFTR
QLLEGMFYIHKNRILHRDIKAANILVTRDCRLKIGDWGLARTCHPPPYPA
PMVAEDRGGVRSASEREKTSRYTDNVVTLWYRAPELLMGVTSYTTAIDMW
SIGCLIAELFLLRTLLQGRDELEQLNLIFNLCGTPSPDTWPALGQGQAQA
PPPPPSRPPPSRPLHPSYRPRIVKQKLSCTPGGKEGADLVDKLLALNPNS
RWSAEQALDHDYLWMEDPKEPGELPPIIHLRRAQANAGGKG* back to topmRNA from alignment at scaffold_2:672641..674330- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_891 ID=mRNA_891|Name=jgi.p|Nanoce1779_2|574537|organism=Nannochloropsis oceanica|type=mRNA|length=1690bp|location=Sequence derived from alignment at scaffold_2:672641..674330- (Nannochloropsis oceanica)
ACAGATGCCTCCTCCTTCCCCTCTTCCTCCTCCTCCCCCACCGCCACTGC
CTCATGCAGCACCAGCTTCATCGATCAAGCCCAAGGTGAAGCCCCCTCCC
CCTCCCCCCCCCTTGCGTCTTCCTAATCCTCCTCCTCCTCCTCCCACGAA
GAGACCGATTGCTGAAGGAGGACGCGGCAACGAGCCACCTGTGAAAAAAG
TGTCACTACCACCGCCGCCTCCTCCACGACCGGCAGCGCCACCACCAGCT
CGGCTCGGACCGCAGCAGCAACAGCAGGCCAACAAACCGCCCTCGGCAGC
CACAAATCGACCAGGCATCCCCACGCATGTCACCCCACCCCCCGTTATAC
CAATGGCGGTGCCCAGAGCGCCAACTTTGGTGGGGGCCACGGACATGGCG
TCTAAGTACGAAATGTTGGAGCAAATTGGGAGTGGCACCTACGGCTACGT
GTTTCGAGCCCGCGTGCGGGGCACGGACAAGGTGGTTGCCCTGAAGAGGA
TCAAGATGGACGACCCCCGGCCTGAGGCACATCGGGATGGGGTAGGTTTG
TGTGTATGGAATGCTTCTGATCGTTTCCCTAATCTCGTCTCTCTCCTCTT
CGCTTGCTCCAAAATAAGCTTACTCCGCTCATTCTTCCCTTTCCCCCCAC
TCTTTTAATTGAGTTCCCAATCACAGCCCTCCGTGAAATCAAGCTCCTCA
GCTGTATGTCTCACGAGAACGTGGTCCGCCTCGAGGAAATTGCTACCTCC
AACAGCAGTAGTAGCGCCTCCTCTTCTTCCTCATCCCAGGGAGAAGAGAA
CGACTTCGGGCTCGTCTCGCACGTTCCCTCTTCTATCTACATGGTCTTTG
AGTACTGCGAAGCTGATCTCTTGGACGTGCTCAAAGCCGTGCGCAACCAC
ACCCTTTACCTCACCCAGGACCACTTCCATTCCTTCACCCGCCAGCTCCT
CGAAGGCATGTTCTATATCCACAAGAATCGTATTCTGCATCGTGATATCA
AGGCTGCCAACATCCTCGTCACTCGTGACTGTCGTCTGAAAATAGGCGAT
TGGGGCCTCGCTCGCACTTGTCATCCGCCCCCTTATCCCGCGCCGATGGT
GGCGGAGGATCGCGGGGGTGTGCGATCGGCGAGTGAGAGGGAGAAGACGA
GTAGGTATACCGACAACGTGGTGACGCTTTGGTATCGTGCTCCTGAGTTG
TTGATGGGGGTGACCAGCTACACCACCGCCATTGATATGTGGTCTATCGG
CTGTTTGATCGCAGAGTTGTTTTTGCTGCGCACGTTGCTGCAAGGCCGCG
ACGAATTAGAGCAGCTGAACTTGATTTTTAATCTGTGTGGGACTCCGAGC
CCGGACACATGGCCTGCTCTCGGGCAAGGACAAGCGCAAGCCCCCCCTCC
TCCTCCCTCTCGTCCTCCTCCCTCCCGCCCTCTCCACCCGTCTTATCGTC
CGCGGATCGTGAAGCAAAAATTGAGCTGTACGCCAGGGGGAAAAGAAGGG
GCCGATCTGGTTGACAAGCTGTTGGCGCTTAATCCCAACAGTCGGTGGAG
TGCAGAGCAGGCATTAGATCACGATTATTTGTGGATGGAAGACCCAAAAG
AGCCAGGAGAATTGCCGCCGATCATACATTTGAGAAGAGCTCAGGCGAAT
GCGGGGGGGAAGGGGTGAGAGAGGAAAGGAAAGAAGAGAC back to topCoding sequence (CDS) from alignment at scaffold_2:672641..674330- >mRNA_891 ID=mRNA_891|Name=jgi.p|Nanoce1779_2|574537|organism=Nannochloropsis oceanica|type=CDS|length=4428bp|location=Sequence derived from alignment at scaffold_2:672641..674330- (Nannochloropsis oceanica)
TTCCCAATCACAGCCCTCCGTGAAATCAAGCTCCTCAGCTGTATGTCTCA
CGAGAACGTGGTCCGCCTCGAGGAAATTGCTACCTCCAACAGCAGTAGTA
GCGCCTCCTCTTCTTCCTCATCCCAGGGAGAAGAGAACGACTTCGGGCTC
GTCTCGCACGTTCCCTCTTCTATCTACATGGTCTTTGAGTACTGCGAAGC
TGATCTCTTGGACGTGCTCAAAGCCGTGCGCAACCACACCCTTTACCTCA
CCCAGGACCACTTCCATTCCTTCACCCGCCAGCTCCTCGAAGGCATGTTC
TATATCCACAAGAATCGTATTCTGCATCGTGATATCAAGGCTGCCAACAT
CCTCGTCACTCGTGACTGTCGTCTGAAAATAGGCGATTGGGGCCTCGCTC
GCACTTGTCATCCGCCCCCTTATCCCGCGCCGATGGTGGCGGAGGATCGC
GGGGGTGTGCGATCGGCGAGTGAGAGGGAGAAGACGAGTAGGTATACCGA
CAACGTGGTGACGCTTTGGTATCGTGCTCCTGAGTTGTTGATGGGGGTGA
CCAGCTACACCACCGCCATTGATATGTGGTCTATCGGCTGTTTGATCGCA
GAGTTGTTTTTGCTGCGCACGTTGCTGCAAGGCCGCGACGAATTAGAGCA
GCTGAACTTGATTTTTAATCTGTGTGGGACTCCGAGCCCGGACACATGGC
CTGCTCTCGGGCAAGGACAAGCGCAAGCCCCCCCTCCTCCTCCCTCTCGT
CCTCCTCCCTCCCGCCCTCTCCACCCGTCTTATCGTCCGCGGATCGTGAA
GCAAAAATTGAGCTGTACGCCAGGGGGAAAAGAAGGGGCCGATCTGGTTG
ACAAGCTGTTGGCGCTTAATCCCAACAGTCGGTGGAGTGCAGAGCAGGCA
TTAGATCACGATTATTTGTGGATGGAAGACCCAAAAGAGCCAGGAGAATT
GCCGCCGATCATACATTTGAGAAGAGCTCAGGCGAATGCGGGGGGGAAGG
GGTGAAGACCGATTGCTGAAGGAGGACGCGGCAACGAGCCACCTGTGAAA
AAAGTGTCACTACCACCGCCGCCTCCTCCACGACCGGCAGCGCCACCACC
AGCTCGGCTCGGACCGCAGCAGCAACAGCAGGCCAACAAACCGCCCTCGG
CAGCCACAAATCGACCAGGCATCCCCACGCATGTCACCCCACCCCCCGTT
ATACCAATGGCGGTGCCCAGAGCGCCAACTTTGGTGGGGGCCACGGACAT
GGCGTCTAAGTACGAAATGTTGGAGCAAATTGGGAGTGGCACCTACGGCT
ACGTGTTTCGAGCCCGCGTGCGGGGCACGGACAAGGTGGTTGCCCTGAAG
AGGATCAAGATGGACGACCCCCGGCCTGAGGCACATCGGGATGGGATGCC
TCCTCCTTCCCCTCTTCCTCCTCCTCCCCCACCGCCACTGCCTCATGCAG
CACCAGCTTCATCGATCAAGCCCAAGTTCCCAATCACAGCCCTCCGTGAA
ATCAAGCTCCTCAGCTGTATGTCTCACGAGAACGTGGTCCGCCTCGAGGA
AATTGCTACCTCCAACAGCAGTAGTAGCGCCTCCTCTTCTTCCTCATCCC
AGGGAGAAGAGAACGACTTCGGGCTCGTCTCGCACGTTCCCTCTTCTATC
TACATGGTCTTTGAGTACTGCGAAGCTGATCTCTTGGACGTGCTCAAAGC
CGTGCGCAACCACACCCTTTACCTCACCCAGGACCACTTCCATTCCTTCA
CCCGCCAGCTCCTCGAAGGCATGTTCTATATCCACAAGAATCGTATTCTG
CATCGTGATATCAAGGCTGCCAACATCCTCGTCACTCGTGACTGTCGTCT
GAAAATAGGCGATTGGGGCCTCGCTCGCACTTGTCATCCGCCCCCTTATC
CCGCGCCGATGGTGGCGGAGGATCGCGGGGGTGTGCGATCGGCGAGTGAG
AGGGAGAAGACGAGTAGGTATACCGACAACGTGGTGACGCTTTGGTATCG
TGCTCCTGAGTTGTTGATGGGGGTGACCAGCTACACCACCGCCATTGATA
TGTGGTCTATCGGCTGTTTGATCGCAGAGTTGTTTTTGCTGCGCACGTTG
CTGCAAGGCCGCGACGAATTAGAGCAGCTGAACTTGATTTTTAATCTGTG
TGGGACTCCGAGCCCGGACACATGGCCTGCTCTCGGGCAAGGACAAGCGC
AAGCCCCCCCTCCTCCTCCCTCTCGTCCTCCTCCCTCCCGCCCTCTCCAC
CCGTCTTATCGTCCGCGGATCGTGAAGCAAAAATTGAGCTGTACGCCAGG
GGGAAAAGAAGGGGCCGATCTGGTTGACAAGCTGTTGGCGCTTAATCCCA
ACAGTCGGTGGAGTGCAGAGCAGGCATTAGATCACGATTATTTGTGGATG
GAAGACCCAAAAGAGCCAGGAGAATTGCCGCCGATCATACATTTGAGAAG
AGCTCAGGCGAATGCGGGGGGGAAGGGGTGAAGACCGATTGCTGAAGGAG
GACGCGGCAACGAGCCACCTGTGAAAAAAGTGTCACTACCACCGCCGCCT
CCTCCACGACCGGCAGCGCCACCACCAGCTCGGCTCGGACCGCAGCAGCA
ACAGCAGGCCAACAAACCGCCCTCGGCAGCCACAAATCGACCAGGCATCC
CCACGCATGTCACCCCACCCCCCGTTATACCAATGGCGGTGCCCAGAGCG
CCAACTTTGGTGGGGGCCACGGACATGGCGTCTAAGTACGAAATGTTGGA
GCAAATTGGGAGTGGCACCTACGGCTACGTGTTTCGAGCCCGCGTGCGGG
GCACGGACAAGGTGGTTGCCCTGAAGAGGATCAAGATGGACGACCCCCGG
CCTGAGGCACATCGGGATGGGATGCCTCCTCCTTCCCCTCTTCCTCCTCC
TCCCCCACCGCCACTGCCTCATGCAGCACCAGCTTCATCGATCAAGCCCA
AGTTCCCAATCACAGCCCTCCGTGAAATCAAGCTCCTCAGCTGTATGTCT
CACGAGAACGTGGTCCGCCTCGAGGAAATTGCTACCTCCAACAGCAGTAG
TAGCGCCTCCTCTTCTTCCTCATCCCAGGGAGAAGAGAACGACTTCGGGC
TCGTCTCGCACGTTCCCTCTTCTATCTACATGGTCTTTGAGTACTGCGAA
GCTGATCTCTTGGACGTGCTCAAAGCCGTGCGCAACCACACCCTTTACCT
CACCCAGGACCACTTCCATTCCTTCACCCGCCAGCTCCTCGAAGGCATGT
TCTATATCCACAAGAATCGTATTCTGCATCGTGATATCAAGGCTGCCAAC
ATCCTCGTCACTCGTGACTGTCGTCTGAAAATAGGCGATTGGGGCCTCGC
TCGCACTTGTCATCCGCCCCCTTATCCCGCGCCGATGGTGGCGGAGGATC
GCGGGGGTGTGCGATCGGCGAGTGAGAGGGAGAAGACGAGTAGGTATACC
GACAACGTGGTGACGCTTTGGTATCGTGCTCCTGAGTTGTTGATGGGGGT
GACCAGCTACACCACCGCCATTGATATGTGGTCTATCGGCTGTTTGATCG
CAGAGTTGTTTTTGCTGCGCACGTTGCTGCAAGGCCGCGACGAATTAGAG
CAGCTGAACTTGATTTTTAATCTGTGTGGGACTCCGAGCCCGGACACATG
GCCTGCTCTCGGGCAAGGACAAGCGCAAGCCCCCCCTCCTCCTCCCTCTC
GTCCTCCTCCCTCCCGCCCTCTCCACCCGTCTTATCGTCCGCGGATCGTG
AAGCAAAAATTGAGCTGTACGCCAGGGGGAAAAGAAGGGGCCGATCTGGT
TGACAAGCTGTTGGCGCTTAATCCCAACAGTCGGTGGAGTGCAGAGCAGG
CATTAGATCACGATTATTTGTGGATGGAAGACCCAAAAGAGCCAGGAGAA
TTGCCGCCGATCATACATTTGAGAAGAGCTCAGGCGAATGCGGGGGGGAA
GGGGTGAAGACCGATTGCTGAAGGAGGACGCGGCAACGAGCCACCTGTGA
AAAAAGTGTCACTACCACCGCCGCCTCCTCCACGACCGGCAGCGCCACCA
CCAGCTCGGCTCGGACCGCAGCAGCAACAGCAGGCCAACAAACCGCCCTC
GGCAGCCACAAATCGACCAGGCATCCCCACGCATGTCACCCCACCCCCCG
TTATACCAATGGCGGTGCCCAGAGCGCCAACTTTGGTGGGGGCCACGGAC
ATGGCGTCTAAGTACGAAATGTTGGAGCAAATTGGGAGTGGCACCTACGG
CTACGTGTTTCGAGCCCGCGTGCGGGGCACGGACAAGGTGGTTGCCCTGA
AGAGGATCAAGATGGACGACCCCCGGCCTGAGGCACATCGGGATGGGATG
CCTCCTCCTTCCCCTCTTCCTCCTCCTCCCCCACCGCCACTGCCTCATGC
AGCACCAGCTTCATCGATCAAGCCCAAG back to top
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