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Properties
Property Name | Value |
TranscriptId | 633296 |
Track | FilteredModels2 |
ProteinId | 633210 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_29 | supercontig | scaffold_29:118764..121781 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8896 ID=mRNA_8896|Name=jgi.p|Nanoce1779_2|633210|organism=Nannochloropsis oceanica|type=mRNA|length=3018bp ACAGGCATAAAAGAAGAAGAAGGAGAAGAAGAAGCTAGCCTCCCCACCCT CGCTCGCTTTCTCTCAATCAAGCACCATGGCTGCTGCCCTCGCCCTCAAC GCGCCCCTGCTGGGTGTCGACTCCGATTCGGAAGAAGAGGATGAGGAGAT TGTGCCCATGTCCGCAGAGATTGCCCTGTCGCGTGGCAGCACGCTTCTTC CACCCGGCAGCATCACCCCCCTAGGCAGCAGCAGCAACGCGGTGGCAGCC AGCAGCAGCACTGCCAGCGCGGCTGTAAAGCGCCGGCAAAGCCTAGGTGG AGCCGCATTATCTACAGCATTTACTGAGACACAGCTGTTGTCGGCCTCGG ATCGCTTTCGAGATGCCTGGGCCAGAGTCCAAGCTAACGAGTGGGACGTG CGGGCGTGGACTGCCATCCTCAGCGAAGCGCAGACACAACGCTCCGGCCG TGCCATCGCCTTGCGTGATGTTTACAAGCTTGCGACGCGTCAATTTCCTA CCATGGCGACGCTGTGGAAGGACTGGTTGGAGCATGAAATGAGACAAGGG AATTTCGCAGAAGTAGACAATATTTTTCGTCAATGCCTCCTGGAAGTCCC CTCGGTCGACCTCTACCTCCTCTATGTGGCGCGTGTCCGCAAAACTAATC CTGCATCTCTAGGGGATGGAGCGTCGCCTGATGTGGTGGCGGAGCAGCGG GAGCGAGTGACGGCTGCATTTGAGTTGGCCGTGAGACAAGTGGGAGTGCT GGTGGACGCAGCGCCGTTGTGGTGGGATTACATTCGGTATGTTGAGGCTT GGAGGGACGAGGGGGGAAGGGAAGATGGGGGCAGTTATGGTGCGGTGGCG GAGGCGGGGTCGAAGATAGCGACGTTAAGGAAAGTATACCACCGAGCTGT GCTGGTGCCGTTGGATGGGCTGGACGAGTTGTGGCGTGCCTATGAAGCGT GGGAGAAGGGATTGAACGAGCACACAGCGAGGCAGACATTACCGCAATTG CTGCCTGGGTATCAGCAGGCGAAGACCGTGGCGAGGGAGAGGAGGACGTT GCTTGACTTGCCCAAAGTGAGTAAATGGGCCGTTCCCCCTTCAGAGGCCG CGGAGGAGAAGGAGCAATTGCATCTTTTCCGGCGAAAGATCGATTTTGAG AAGGGAAACCCCGAGAATGTGGATCCGGTAGCACTGAAAGATAGGGTGCG ATTGGCGTATAGGCAGGGTTTTGCTTATTTTTATCATTTCCCGGAGGTAT GGTTTGAGTTTGCCTTGTACGAGCAAGAGAGCGATGATGTCGCTGCTGCT GCTTCTCTCTTCGCCCGTGCCACGCGGGCGGTGCCGGACTGTTTACTGCT GCACTTAGCATGGGCAGAATTAGAGGAGGGGAGGGGGAGGGCTGAAAAGG GCGTGGAGGTGTTGAAGGGCTTCTTGACCCGAGAACCAAGCACACTGGGG TACATTGCATACCAACATTTCGTGAGGAGGACGCTGGGGAAGGAAGCTGC AAGGAAGGTGTTCACAAGCACGAAGGACTTGAGAAGGAAAGGTGTCTTGG GGTATCAGTGGTATTTGGCACACGCGCGGTTGGAGCAGCACGTGAATCAA GAGGAAGAGGTGGCGCGGAAGGTCCTCGATCATGGTCTCTCCCAGCATTC CTCGTTTTTATTGGAGCCTGACTACGTCATAGCCACGATGGATCTACTCA TCTCCCTCCACGATGAACAAAACGTCCGTGGCCTGGCAGACCGGGCTCTC GCCGTGCTCGACGCCGCGCCCGCAGCGGCTGTTGCTGCACCTGGAGGAGA GCGGGAAGAGGTGGCATCGGCCGCAGCAGCGATGGCAGCAGCAGAGAAGG CAAGACCGATTTGGTTGAAGCTGCTGGAGTTTGAGATGTGCTTTGCCAGT GATCGCGACCCTTCGAGGGTGGAAAAGGTCCAGAAGAGAATAGCAGAAGC GTACCCACGACAAGCGGAGCCACATCCTTTCCTGCGGCTGTGGAGGAGGG TGAACATGTTGAAGGCAGCACCTGCATCAGAGGGGTCGGATGACCTATTA AGGCAGAGATGGGACGAGCCCCGGGTCAGTTACGGGCTAGCGGAGGAGGG AGGGAGGGAGGGAGGGATAAGTGGGGGGAGAGGTGGTGGAAGGGGGGCAG GGAAGAGGAATGGAGGGAAGACAGGAGGGGCGTCGGCGGCGGCACTGGCG GCAGCATCAGCAGCGGCAGTGGCGGCGGAGGGAGTAGGGACGTTGTCGGC AGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGGAGACGGAGGAGAAATAA GTGGCGGTGGGGATCCGAGAGCAGCAGCAGCGTTAGCGGCAAGAGAGGGA CGGACGAGGAGAGAGGACCCTCATGGAGCAAAGGCGCTACAGCAACGGCG ATTGCAGAGTATTCCTGAGTATTTGCGTCGGCTTTATCAGATCTTGCCCA TCCATACAGGTCCTCCCATAGACCCCGATACCATCATAAGGGGTTTGAGA GAGACACCGTTGCCACCTCGTCCACCGGGACCAGCGCATGGTTCCTCTTC AGGGGCTCTAGGAGAGAGGGAGAGGGGAGGGAGGGGAGGAAGAGCGGGGG GGAGGAAGAGGGGGAGGTACGGGGGTGGGGGGGATTCGGATAGTGGGGGA AGTGATGATGACATGATGAGGACAGGGACTCGAGATGTGTTTCGACAGCG ACAGCAGGAGAAATTGATGAACGAGGCGTTACAGGGCTAGGAGGGCGGGA GGGAGGGAGGGAGGGAGAGGCGGGAGGGAGAGAGGGAGGGATATCGAGGG GCGAATGGAGTCAATCGGAGAGCTCCAAAGGACGATAGACGTAAACAAAG AGTGAAAGAAGCGTATTAAGACGAGACCAAAAGACTTTTCATCAAAGTTC TAGGTCAGGGATTTCACTCCATTCCTCTATGCTCCGACTCTCGACAGGTG TAAACAGACACGAGTCAGAGAAATGATGCACAATAGAAAAACAAGGAAGG CAAACAATCGTTTTTTTC back to topprotein sequence of jgi.p|Nanoce1779_2|633210 >mRNA_8896-protein ID=mRNA_8896-protein|Name=jgi.p|Nanoce1779_2|633210|organism=Nannochloropsis oceanica|type=polypeptide|length=888bp MAAALALNAPLLGVDSDSEEEDEEIVPMSAEIALSRGSTLLPPGSITPLG SSSNAVAASSSTASAAVKRRQSLGGAALSTAFTETQLLSASDRFRDAWAR VQANEWDVRAWTAILSEAQTQRSGRAIALRDVYKLATRQFPTMATLWKDW LEHEMRQGNFAEVDNIFRQCLLEVPSVDLYLLYVARVRKTNPASLGDGAS PDVVAEQRERVTAAFELAVRQVGVLVDAAPLWWDYIRYVEAWRDEGGRED GGSYGAVAEAGSKIATLRKVYHRAVLVPLDGLDELWRAYEAWEKGLNEHT ARQTLPQLLPGYQQAKTVARERRTLLDLPKVSKWAVPPSEAAEEKEQLHL FRRKIDFEKGNPENVDPVALKDRVRLAYRQGFAYFYHFPEVWFEFALYEQ ESDDVAAAASLFARATRAVPDCLLLHLAWAELEEGRGRAEKGVEVLKGFL TREPSTLGYIAYQHFVRRTLGKEAARKVFTSTKDLRRKGVLGYQWYLAHA RLEQHVNQEEEVARKVLDHGLSQHSSFLLEPDYVIATMDLLISLHDEQNV RGLADRALAVLDAAPAAAVAAPGGEREEVASAAAAMAAAEKARPIWLKLL EFEMCFASDRDPSRVEKVQKRIAEAYPRQAEPHPFLRLWRRVNMLKAAPA SEGSDDLLRQRWDEPRVSYGLAEEGGREGGISGGRGGGRGAGKRNGGKTG GASAAALAAASAAAVAAEGVGTLSAEGGREGGREEGDGGEISGGGDPRAA AALAAREGRTRREDPHGAKALQQRRLQSIPEYLRRLYQILPIHTGPPIDP DTIIRGLRETPLPPRPPGPAHGSSSGALGERERGGRGGRAGGRKRGRYGG GGDSDSGGSDDDMMRTGTRDVFRQRQQEKLMNEALQG* back to topmRNA from alignment at scaffold_29:118764..121781- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8896 ID=mRNA_8896|Name=jgi.p|Nanoce1779_2|633210|organism=Nannochloropsis oceanica|type=mRNA|length=3018bp|location=Sequence derived from alignment at scaffold_29:118764..121781- (Nannochloropsis oceanica) ACAGGCATAAAAGAAGAAGAAGGAGAAGAAGAAGCTAGCCTCCCCACCCT
CGCTCGCTTTCTCTCAATCAAGCACCATGGCTGCTGCCCTCGCCCTCAAC
GCGCCCCTGCTGGGTGTCGACTCCGATTCGGAAGAAGAGGATGAGGAGAT
TGTGCCCATGTCCGCAGAGATTGCCCTGTCGCGTGGCAGCACGCTTCTTC
CACCCGGCAGCATCACCCCCCTAGGCAGCAGCAGCAACGCGGTGGCAGCC
AGCAGCAGCACTGCCAGCGCGGCTGTAAAGCGCCGGCAAAGCCTAGGTGG
AGCCGCATTATCTACAGCATTTACTGAGACACAGCTGTTGTCGGCCTCGG
ATCGCTTTCGAGATGCCTGGGCCAGAGTCCAAGCTAACGAGTGGGACGTG
CGGGCGTGGACTGCCATCCTCAGCGAAGCGCAGACACAACGCTCCGGCCG
TGCCATCGCCTTGCGTGATGTTTACAAGCTTGCGACGCGTCAATTTCCTA
CCATGGCGACGCTGTGGAAGGACTGGTTGGAGCATGAAATGAGACAAGGG
AATTTCGCAGAAGTAGACAATATTTTTCGTCAATGCCTCCTGGAAGTCCC
CTCGGTCGACCTCTACCTCCTCTATGTGGCGCGTGTCCGCAAAACTAATC
CTGCATCTCTAGGGGATGGAGCGTCGCCTGATGTGGTGGCGGAGCAGCGG
GAGCGAGTGACGGCTGCATTTGAGTTGGCCGTGAGACAAGTGGGAGTGCT
GGTGGACGCAGCGCCGTTGTGGTGGGATTACATTCGGTATGTTGAGGCTT
GGAGGGACGAGGGGGGAAGGGAAGATGGGGGCAGTTATGGTGCGGTGGCG
GAGGCGGGGTCGAAGATAGCGACGTTAAGGAAAGTATACCACCGAGCTGT
GCTGGTGCCGTTGGATGGGCTGGACGAGTTGTGGCGTGCCTATGAAGCGT
GGGAGAAGGGATTGAACGAGCACACAGCGAGGCAGACATTACCGCAATTG
CTGCCTGGGTATCAGCAGGCGAAGACCGTGGCGAGGGAGAGGAGGACGTT
GCTTGACTTGCCCAAAGTGAGTAAATGGGCCGTTCCCCCTTCAGAGGCCG
CGGAGGAGAAGGAGCAATTGCATCTTTTCCGGCGAAAGATCGATTTTGAG
AAGGGAAACCCCGAGAATGTGGATCCGGTAGCACTGAAAGATAGGGTGCG
ATTGGCGTATAGGCAGGGTTTTGCTTATTTTTATCATTTCCCGGAGGTAT
GGTTTGAGTTTGCCTTGTACGAGCAAGAGAGCGATGATGTCGCTGCTGCT
GCTTCTCTCTTCGCCCGTGCCACGCGGGCGGTGCCGGACTGTTTACTGCT
GCACTTAGCATGGGCAGAATTAGAGGAGGGGAGGGGGAGGGCTGAAAAGG
GCGTGGAGGTGTTGAAGGGCTTCTTGACCCGAGAACCAAGCACACTGGGG
TACATTGCATACCAACATTTCGTGAGGAGGACGCTGGGGAAGGAAGCTGC
AAGGAAGGTGTTCACAAGCACGAAGGACTTGAGAAGGAAAGGTGTCTTGG
GGTATCAGTGGTATTTGGCACACGCGCGGTTGGAGCAGCACGTGAATCAA
GAGGAAGAGGTGGCGCGGAAGGTCCTCGATCATGGTCTCTCCCAGCATTC
CTCGTTTTTATTGGAGCCTGACTACGTCATAGCCACGATGGATCTACTCA
TCTCCCTCCACGATGAACAAAACGTCCGTGGCCTGGCAGACCGGGCTCTC
GCCGTGCTCGACGCCGCGCCCGCAGCGGCTGTTGCTGCACCTGGAGGAGA
GCGGGAAGAGGTGGCATCGGCCGCAGCAGCGATGGCAGCAGCAGAGAAGG
CAAGACCGATTTGGTTGAAGCTGCTGGAGTTTGAGATGTGCTTTGCCAGT
GATCGCGACCCTTCGAGGGTGGAAAAGGTCCAGAAGAGAATAGCAGAAGC
GTACCCACGACAAGCGGAGCCACATCCTTTCCTGCGGCTGTGGAGGAGGG
TGAACATGTTGAAGGCAGCACCTGCATCAGAGGGGTCGGATGACCTATTA
AGGCAGAGATGGGACGAGCCCCGGGTCAGTTACGGGCTAGCGGAGGAGGG
AGGGAGGGAGGGAGGGATAAGTGGGGGGAGAGGTGGTGGAAGGGGGGCAG
GGAAGAGGAATGGAGGGAAGACAGGAGGGGCGTCGGCGGCGGCACTGGCG
GCAGCATCAGCAGCGGCAGTGGCGGCGGAGGGAGTAGGGACGTTGTCGGC
AGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGGAGACGGAGGAGAAATAA
GTGGCGGTGGGGATCCGAGAGCAGCAGCAGCGTTAGCGGCAAGAGAGGGA
CGGACGAGGAGAGAGGACCCTCATGGAGCAAAGGCGCTACAGCAACGGCG
ATTGCAGAGTATTCCTGAGTATTTGCGTCGGCTTTATCAGATCTTGCCCA
TCCATACAGGTCCTCCCATAGACCCCGATACCATCATAAGGGGTTTGAGA
GAGACACCGTTGCCACCTCGTCCACCGGGACCAGCGCATGGTTCCTCTTC
AGGGGCTCTAGGAGAGAGGGAGAGGGGAGGGAGGGGAGGAAGAGCGGGGG
GGAGGAAGAGGGGGAGGTACGGGGGTGGGGGGGATTCGGATAGTGGGGGA
AGTGATGATGACATGATGAGGACAGGGACTCGAGATGTGTTTCGACAGCG
ACAGCAGGAGAAATTGATGAACGAGGCGTTACAGGGCTAGGAGGGCGGGA
GGGAGGGAGGGAGGGAGAGGCGGGAGGGAGAGAGGGAGGGATATCGAGGG
GCGAATGGAGTCAATCGGAGAGCTCCAAAGGACGATAGACGTAAACAAAG
AGTGAAAGAAGCGTATTAAGACGAGACCAAAAGACTTTTCATCAAAGTTC
TAGGTCAGGGATTTCACTCCATTCCTCTATGCTCCGACTCTCGACAGGTG
TAAACAGACACGAGTCAGAGAAATGATGCACAATAGAAAAACAAGGAAGG
CAAACAATCGTTTTTTTC back to topCoding sequence (CDS) from alignment at scaffold_29:118764..121781- >mRNA_8896 ID=mRNA_8896|Name=jgi.p|Nanoce1779_2|633210|organism=Nannochloropsis oceanica|type=CDS|length=2664bp|location=Sequence derived from alignment at scaffold_29:118764..121781- (Nannochloropsis oceanica) ATGGCTGCTGCCCTCGCCCTCAACGCGCCCCTGCTGGGTGTCGACTCCGA TTCGGAAGAAGAGGATGAGGAGATTGTGCCCATGTCCGCAGAGATTGCCC TGTCGCGTGGCAGCACGCTTCTTCCACCCGGCAGCATCACCCCCCTAGGC AGCAGCAGCAACGCGGTGGCAGCCAGCAGCAGCACTGCCAGCGCGGCTGT AAAGCGCCGGCAAAGCCTAGGTGGAGCCGCATTATCTACAGCATTTACTG AGACACAGCTGTTGTCGGCCTCGGATCGCTTTCGAGATGCCTGGGCCAGA GTCCAAGCTAACGAGTGGGACGTGCGGGCGTGGACTGCCATCCTCAGCGA AGCGCAGACACAACGCTCCGGCCGTGCCATCGCCTTGCGTGATGTTTACA AGCTTGCGACGCGTCAATTTCCTACCATGGCGACGCTGTGGAAGGACTGG TTGGAGCATGAAATGAGACAAGGGAATTTCGCAGAAGTAGACAATATTTT TCGTCAATGCCTCCTGGAAGTCCCCTCGGTCGACCTCTACCTCCTCTATG TGGCGCGTGTCCGCAAAACTAATCCTGCATCTCTAGGGGATGGAGCGTCG CCTGATGTGGTGGCGGAGCAGCGGGAGCGAGTGACGGCTGCATTTGAGTT GGCCGTGAGACAAGTGGGAGTGCTGGTGGACGCAGCGCCGTTGTGGTGGG ATTACATTCGGTATGTTGAGGCTTGGAGGGACGAGGGGGGAAGGGAAGAT GGGGGCAGTTATGGTGCGGTGGCGGAGGCGGGGTCGAAGATAGCGACGTT AAGGAAAGTATACCACCGAGCTGTGCTGGTGCCGTTGGATGGGCTGGACG AGTTGTGGCGTGCCTATGAAGCGTGGGAGAAGGGATTGAACGAGCACACA GCGAGGCAGACATTACCGCAATTGCTGCCTGGGTATCAGCAGGCGAAGAC CGTGGCGAGGGAGAGGAGGACGTTGCTTGACTTGCCCAAAGTGAGTAAAT GGGCCGTTCCCCCTTCAGAGGCCGCGGAGGAGAAGGAGCAATTGCATCTT TTCCGGCGAAAGATCGATTTTGAGAAGGGAAACCCCGAGAATGTGGATCC GGTAGCACTGAAAGATAGGGTGCGATTGGCGTATAGGCAGGGTTTTGCTT ATTTTTATCATTTCCCGGAGGTATGGTTTGAGTTTGCCTTGTACGAGCAA GAGAGCGATGATGTCGCTGCTGCTGCTTCTCTCTTCGCCCGTGCCACGCG GGCGGTGCCGGACTGTTTACTGCTGCACTTAGCATGGGCAGAATTAGAGG AGGGGAGGGGGAGGGCTGAAAAGGGCGTGGAGGTGTTGAAGGGCTTCTTG ACCCGAGAACCAAGCACACTGGGGTACATTGCATACCAACATTTCGTGAG GAGGACGCTGGGGAAGGAAGCTGCAAGGAAGGTGTTCACAAGCACGAAGG ACTTGAGAAGGAAAGGTGTCTTGGGGTATCAGTGGTATTTGGCACACGCG CGGTTGGAGCAGCACGTGAATCAAGAGGAAGAGGTGGCGCGGAAGGTCCT CGATCATGGTCTCTCCCAGCATTCCTCGTTTTTATTGGAGCCTGACTACG TCATAGCCACGATGGATCTACTCATCTCCCTCCACGATGAACAAAACGTC CGTGGCCTGGCAGACCGGGCTCTCGCCGTGCTCGACGCCGCGCCCGCAGC GGCTGTTGCTGCACCTGGAGGAGAGCGGGAAGAGGTGGCATCGGCCGCAG CAGCGATGGCAGCAGCAGAGAAGGCAAGACCGATTTGGTTGAAGCTGCTG GAGTTTGAGATGTGCTTTGCCAGTGATCGCGACCCTTCGAGGGTGGAAAA GGTCCAGAAGAGAATAGCAGAAGCGTACCCACGACAAGCGGAGCCACATC CTTTCCTGCGGCTGTGGAGGAGGGTGAACATGTTGAAGGCAGCACCTGCA TCAGAGGGGTCGGATGACCTATTAAGGCAGAGATGGGACGAGCCCCGGGT CAGTTACGGGCTAGCGGAGGAGGGAGGGAGGGAGGGAGGGATAAGTGGGG GGAGAGGTGGTGGAAGGGGGGCAGGGAAGAGGAATGGAGGGAAGACAGGA GGGGCGTCGGCGGCGGCACTGGCGGCAGCATCAGCAGCGGCAGTGGCGGC GGAGGGAGTAGGGACGTTGTCGGCAGAGGGAGGGAGGGAGGGAGGGAGGG AGGAGGGAGACGGAGGAGAAATAAGTGGCGGTGGGGATCCGAGAGCAGCA GCAGCGTTAGCGGCAAGAGAGGGACGGACGAGGAGAGAGGACCCTCATGG AGCAAAGGCGCTACAGCAACGGCGATTGCAGAGTATTCCTGAGTATTTGC GTCGGCTTTATCAGATCTTGCCCATCCATACAGGTCCTCCCATAGACCCC GATACCATCATAAGGGGTTTGAGAGAGACACCGTTGCCACCTCGTCCACC GGGACCAGCGCATGGTTCCTCTTCAGGGGCTCTAGGAGAGAGGGAGAGGG GAGGGAGGGGAGGAAGAGCGGGGGGGAGGAAGAGGGGGAGGTACGGGGGT GGGGGGGATTCGGATAGTGGGGGAAGTGATGATGACATGATGAGGACAGG GACTCGAGATGTGTTTCGACAGCGACAGCAGGAGAAATTGATGAACGAGG CGTTACAGGGCTAG back to top
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