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Properties
| Property Name | Value |
|---|
| TranscriptId | 604415 |
| Track | FilteredModels2 |
| ProteinId | 604329 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_29 | supercontig | scaffold_29:59775..61125 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8870 ID=mRNA_8870|Name=jgi.p|Nanoce1779_2|604329|organism=Nannochloropsis oceanica|type=mRNA|length=834bp
ACAGCATCCACTCGGAGCCACCGCCCCCGACCTCAAGCATGCGTGTGATT
GCCTCCTTTCTGTGCCTGGTCGCGGCCTGCAGCGCCTTCCAAATCCCCAT
GGCCCCTCGAGGCCGCAGTAACATGGCCCCCCAGATGCTCGGAAATTTCT
TTACACCCAAGAAAGCACCCCTCCCGGAGTCCTCCACCCCAACCCCGATC
AAGGCGGGCAAGGCAAACGCTGGTCGCTTGAACCTGAAGAGCATCCCTAA
GGAGGCACCGCCTACCCCTAAGAAACGTACATTTACGTCCGCCGGTGTGA
AACTGCCTGCCTTTTCTTTTGGTGCCAAGAAGCCGGCCGCCTCTGCGGAG
CCCACGGCACGTGTGGTGAATGGGAAGTTGCAGGGTTACTTCACCAACGA
GCAAATCGAGTCTCTGGAGGTGGCGCGGCGCGAGGTGCCTTCCTCCGCAC
CTTCTTACTGGAAAAAGATTGCTGCCCGGGTCCCGGGGCAGACGCCTGAG
ACGTGCAAGGCAATGGTAAACCAAATTCTGTTAGACAAAGCACGGGGGAC
GGGGAAGCAGTTCTTTGGGGGCTACGTCGAAGTGAAGGAGACAAAGATGG
TGGTGGACACGGAGGCGACGGTGGGGAAGAGGTTCAAGGCGGCGTTTGGG
ATTAAATAACTGGGGGGGGTAAATAAATGGAGGGGGGGGTCATTTGGAGA
GGGCTGGGAAGCTGCGCTGAGTGGTTGTTGAGAGTGGTTTCTGACGCAGA
GGGTACTGAGCATTAGACTAACGGAAGAAGGAGGCAGGTGGTCGCTCAGT
GTAGAATTGTGTTGCGAGTGTGGATGGGAAGCGG back to topprotein sequence of jgi.p|Nanoce1779_2|604329 >mRNA_8870-protein ID=mRNA_8870-protein|Name=jgi.p|Nanoce1779_2|604329|organism=Nannochloropsis oceanica|type=polypeptide|length=207bp
MRVIASFLCLVAACSAFQIPMAPRGRSNMAPQMLGNFFTPKKAPLPESST
PTPIKAGKANAGRLNLKSIPKEAPPTPKKRTFTSAGVKLPAFSFGAKKPA
ASAEPTARVVNGKLQGYFTNEQIESLEVARREVPSSAPSYWKKIAARVPG
QTPETCKAMVNQILLDKARGTGKQFFGGYVEVKETKMVVDTEATVGKRFK
AAFGIK* back to topmRNA from alignment at scaffold_29:59775..61125+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8870 ID=mRNA_8870|Name=jgi.p|Nanoce1779_2|604329|organism=Nannochloropsis oceanica|type=mRNA|length=1351bp|location=Sequence derived from alignment at scaffold_29:59775..61125+ (Nannochloropsis oceanica)
ACAGCATCCACTCGGAGCCACCGCCCCCGACCTCAAGCATGCGTGTGATT
GCCTCCTTTCTGTGCCTGGTCGCGGCCTGCAGCGCCTTCCAAATCCCCAT
GGCCCCTCGAGGTAAGCTAAGCCCTCGGTGCCACGCCACCTCTTGTTTCT
TTCCATGCCACGCACCCCCCCGGCCAGCACACACCACCATGTTTGTCAAT
GGAATGAAGCCACGTCGAACGCGCATGTCTCTTCCAGCTACAGACATTCT
CATGGAAGGAGAGAGGGTCTGGCATGTTTTTTTGTGCTGGTGTCTGAGTC
GTGTGGCTTCTTGTCCTCCCTGCCCCCCCTCCCCCGTCCATGGCCGCGGC
CATGCGTTCTCCACCACCCACCGTCCAAGCATGCATTTACACTCCATCCA
CCTACTCCCCACAACTTATCTCGTACCATCTCTCACTCTTTCTCCCTCTT
CCCTCCTGTCACCTCCTCAGGCCGCAGTAACATGGCCCCCCAGATGCTCG
GAAATTTCTTTACACCCAAGAAAGCACCCCTCCCGGAGTCCTCCACCCCA
ACCCCGATCAAGGCGGGCAAGGCAAACGCTGGTCGCTTGAACCTGAAGAG
CATCCCTAAGGAGGCACCGCCTACCCCTAAGAAACGTACATTTACGTCCG
CCGGTGTGAAACTGCCTGCCTTTTCTTTTGGTGCCAAGAAGCCGGCCGCC
TCTGCGGAGCCCACGGCACGTGTGGTGAATGGGAAGTTGCAGGTATATTC
TCGTTAAATCTTTTACACTTCTTTTTCACTGGCTCCTTGGCTTATTCATG
TCCTGGGAGGGAAGGCATCCGAAAGAAAAAGACACGAAAAAACGTGGAAA
CTCACCCTCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCGTCGTCAG
GGTTACTTCACCAACGAGCAAATCGAGTCTCTGGAGGTGGCGCGGCGCGA
GGTGCCTTCCTCCGCACCTTCTTACTGGAAAAAGATTGCTGCCCGGGTCC
CGGGGCAGACGCCTGAGACGTGCAAGGCAATGGTAAACCAAATTCTGTTA
GACAAAGCACGGGGGACGGGGAAGCAGTTCTTTGGGGGCTACGTCGAAGT
GAAGGAGACAAAGATGGTGGTGGACACGGAGGCGACGGTGGGGAAGAGGT
TCAAGGCGGCGTTTGGGATTAAATAACTGGGGGGGGTAAATAAATGGAGG
GGGGGGTCATTTGGAGAGGGCTGGGAAGCTGCGCTGAGTGGTTGTTGAGA
GTGGTTTCTGACGCAGAGGGTACTGAGCATTAGACTAACGGAAGAAGGAG
GCAGGTGGTCGCTCAGTGTAGAATTGTGTTGCGAGTGTGGATGGGAAGCG
G back to topCoding sequence (CDS) from alignment at scaffold_29:59775..61125+ >mRNA_8870 ID=mRNA_8870|Name=jgi.p|Nanoce1779_2|604329|organism=Nannochloropsis oceanica|type=CDS|length=1863bp|location=Sequence derived from alignment at scaffold_29:59775..61125+ (Nannochloropsis oceanica)
ATGCGTGTGATTGCCTCCTTTCTGTGCCTGGTCGCGGCCTGCAGCGCCTT
CCAAATCCCCATGGCCCCTCGAGGCCGCAGTAACATGGCCCCCCAGATGC
TCGGAAATTTCTTTACACCCAAGAAAGCACCCCTCCCGGAGTCCTCCACC
CCAACCCCGATCAAGGCGGGCAAGGCAAACGCTGGTCGCTTGAACCTGAA
GAGCATCCCTAAGGAGGCACCGCCTACCCCTAAGAAACGTACATTTACGT
CCGCCGGTGTGAAACTGCCTGCCTTTTCTTTTGGTGCCAAGAAGCCGGCC
GCCTCTGCGGAGCCCACGGCACGTGTGGTGAATGGGAAGTTGCAGGGTTA
CTTCACCAACGAGCAAATCGAGTCTCTGGAGGTGGCGCGGCGCGAGGTGC
CTTCCTCCGCACCTTCTTACTGGAAAAAGATTGCTGCCCGGGTCCCGGGG
CAGACGCCTGAGACGTGCAAGGCAATGGTAAACCAAATTCTGTTAGACAA
AGCACGGGGGACGGGGAAGCAGTTCTTTGGGGGCTACGTCGAAGTGAAGG
AGACAAAGATGGTGGTGGACACGGAGGCGACGGTGGGGAAGAGGTTCAAG
GCGGCGTTTGGGATTAAATAAATGCGTGTGATTGCCTCCTTTCTGTGCCT
GGTCGCGGCCTGCAGCGCCTTCCAAATCCCCATGGCCCCTCGAGGCCGCA
GTAACATGGCCCCCCAGATGCTCGGAAATTTCTTTACACCCAAGAAAGCA
CCCCTCCCGGAGTCCTCCACCCCAACCCCGATCAAGGCGGGCAAGGCAAA
CGCTGGTCGCTTGAACCTGAAGAGCATCCCTAAGGAGGCACCGCCTACCC
CTAAGAAACGTACATTTACGTCCGCCGGTGTGAAACTGCCTGCCTTTTCT
TTTGGTGCCAAGAAGCCGGCCGCCTCTGCGGAGCCCACGGCACGTGTGGT
GAATGGGAAGTTGCAGGGTTACTTCACCAACGAGCAAATCGAGTCTCTGG
AGGTGGCGCGGCGCGAGGTGCCTTCCTCCGCACCTTCTTACTGGAAAAAG
ATTGCTGCCCGGGTCCCGGGGCAGACGCCTGAGACGTGCAAGGCAATGGT
AAACCAAATTCTGTTAGACAAAGCACGGGGGACGGGGAAGCAGTTCTTTG
GGGGCTACGTCGAAGTGAAGGAGACAAAGATGGTGGTGGACACGGAGGCG
ACGGTGGGGAAGAGGTTCAAGGCGGCGTTTGGGATTAAATAAATGCGTGT
GATTGCCTCCTTTCTGTGCCTGGTCGCGGCCTGCAGCGCCTTCCAAATCC
CCATGGCCCCTCGAGGCCGCAGTAACATGGCCCCCCAGATGCTCGGAAAT
TTCTTTACACCCAAGAAAGCACCCCTCCCGGAGTCCTCCACCCCAACCCC
GATCAAGGCGGGCAAGGCAAACGCTGGTCGCTTGAACCTGAAGAGCATCC
CTAAGGAGGCACCGCCTACCCCTAAGAAACGTACATTTACGTCCGCCGGT
GTGAAACTGCCTGCCTTTTCTTTTGGTGCCAAGAAGCCGGCCGCCTCTGC
GGAGCCCACGGCACGTGTGGTGAATGGGAAGTTGCAGGGTTACTTCACCA
ACGAGCAAATCGAGTCTCTGGAGGTGGCGCGGCGCGAGGTGCCTTCCTCC
GCACCTTCTTACTGGAAAAAGATTGCTGCCCGGGTCCCGGGGCAGACGCC
TGAGACGTGCAAGGCAATGGTAAACCAAATTCTGTTAGACAAAGCACGGG
GGACGGGGAAGCAGTTCTTTGGGGGCTACGTCGAAGTGAAGGAGACAAAG
ATGGTGGTGGACACGGAGGCGACGGTGGGGAAGAGGTTCAAGGCGGCGTT
TGGGATTAAATAA back to top
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